RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 PREPP48147 710 aa7.79□□□□□ -1.16
SCFD1-205ENST00000469043 ALKBH2Q6NS38 261 aa7.79□□□□□ -1.16
SCFD1-205ENST00000469043 TMEM102Q8N9M5 508 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-205ENST00000469043 SHKBP1Q8TBC3 707 aa7.79□□□□□ -1.16
SCFD1-205ENST00000469043 WNT11O96014 354 aa7.78□□□□□ -1.16
SCFD1-205ENST00000469043 TAL1P17542 331 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-205ENST00000469043 SPINK2P20155 84 aa7.78□□□□□ -1.16
SCFD1-205ENST00000469043 AAMPQ13685 434 aa7.78□□□□□ -1.16
SCFD1-205ENST00000469043 DTX1Q86Y01 620 aa7.78□□□□□ -1.16
SCFD1-205ENST00000469043 BSNDQ8WZ55 320 aa7.78□□□□□ -1.16
SCFD1-205ENST00000469043 SOX13Q9UN79 622 aa7.78□□□□□ -1.16
SCFD1-205ENST00000469043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-205ENST00000469043 WDR64B1ANS9 1081 aa7.77□□□□□ -1.17
SCFD1-205ENST00000469043 TRPA1O75762 1119 aa7.77□□□□□ -1.17
SCFD1-205ENST00000469043 ACPPP15309 386 aa7.77□□□□□ -1.17
SCFD1-205ENST00000469043 EIF1AXP47813 144 aaKnown RBP7.77□□□□□ -1.17
SCFD1-205ENST00000469043 IKBKEQ14164 716 aa7.77□□□□□ -1.17
SCFD1-205ENST00000469043 NUTM2GQ5VZR2 741 aa7.77□□□□□ -1.17
SCFD1-205ENST00000469043 NXPE3Q969Y0 559 aa7.77□□□□□ -1.17
SCFD1-205ENST00000469043 OSMRQ99650 979 aa7.77□□□□□ -1.17
SCFD1-205ENST00000469043 A6NHS1 94 aa7.76□□□□□ -1.17
SCFD1-205ENST00000469043 BTBD11A6QL63 1104 aa7.76□□□□□ -1.17
SCFD1-205ENST00000469043 C12orf50Q8NA57 414 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-205ENST00000469043 GTF3C2Q8WUA4 911 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-205ENST00000469043 FMNL2Q96PY5 1086 aa7.76□□□□□ -1.17
SCFD1-205ENST00000469043 ARID3AQ99856 593 aa7.76□□□□□ -1.17
SCFD1-205ENST00000469043 CYP4F12Q9HCS2 524 aa7.76□□□□□ -1.17
SCFD1-205ENST00000469043 ATG3Q9NT62 314 aa7.76□□□□□ -1.17
SCFD1-205ENST00000469043 SOX1O00570 391 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-205ENST00000469043 EIF4EBP3O60516 100 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-205ENST00000469043 EDN3P14138 238 aa7.75□□□□□ -1.17
SCFD1-205ENST00000469043 MPSTP25325 297 aa7.75□□□□□ -1.17
SCFD1-205ENST00000469043 MAP4P27816 1152 aaKnown RBP7.75□□□□□ -1.17
SCFD1-205ENST00000469043 RXRBP28702 533 aa7.75□□□□□ -1.17
SCFD1-205ENST00000469043 EHHADHQ08426 723 aa7.75□□□□□ -1.17
SCFD1-205ENST00000469043 HHIPQ96QV1 700 aa7.75□□□□□ -1.17
SCFD1-205ENST00000469043 CHRDQ9H2X0 955 aa7.75□□□□□ -1.17
SCFD1-205ENST00000469043 PHACTR2O75167 634 aa7.74□□□□□ -1.17
SCFD1-205ENST00000469043 USP5P45974 858 aa7.74□□□□□ -1.17
SCFD1-205ENST00000469043 MFSD14AQ96MC6 490 aa7.74□□□□□ -1.17
SCFD1-205ENST00000469043 USP26Q9BXU7 913 aa7.74□□□□□ -1.17
SCFD1-205ENST00000469043 PIM2Q9P1W9 311 aa7.74□□□□□ -1.17
SCFD1-205ENST00000469043 POLIQ9UNA4 740 aa7.74□□□□□ -1.17
SCFD1-205ENST00000469043 LEMD3Q9Y2U8 911 aa7.74□□□□□ -1.17
SCFD1-205ENST00000469043 ADAMTS4O75173 837 aa7.73□□□□□ -1.17
SCFD1-205ENST00000469043 EXOSC6Q5RKV6 272 aaKnown RBP7.73□□□□□ -1.17
SCFD1-205ENST00000469043 HGSNATQ68CP4 663 aa7.73□□□□□ -1.17
SCFD1-205ENST00000469043 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
SCFD1-205ENST00000469043 SMG8Q8ND04 991 aaKnown RBP7.73□□□□□ -1.17
SCFD1-205ENST00000469043 ZKSCAN3Q9BRR0 538 aa7.73□□□□□ -1.17
SCFD1-205ENST00000469043 TMPRSS13Q9BYE2 586 aa7.73□□□□□ -1.17
SCFD1-205ENST00000469043 SOX17Q9H6I2 414 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-205ENST00000469043 SUGCTQ9HAC7 445 aa7.73□□□□□ -1.17
SCFD1-205ENST00000469043 MTMR7Q9Y216 660 aa7.73□□□□□ -1.17
SCFD1-205ENST00000469043 EREGO14944 169 aa7.72□□□□□ -1.17
SCFD1-205ENST00000469043 TNFRSF21O75509 655 aa7.72□□□□□ -1.17
SCFD1-205ENST00000469043 USP11P51784 963 aa7.72□□□□□ -1.17
SCFD1-205ENST00000469043 NFKBIBQ15653 356 aa7.72□□□□□ -1.17
SCFD1-205ENST00000469043 SGO2Q562F6 1265 aa7.72□□□□□ -1.17
SCFD1-205ENST00000469043 VN1R5Q7Z5H4 357 aa7.72□□□□□ -1.17
SCFD1-205ENST00000469043 ASAP3Q8TDY4 903 aa7.72□□□□□ -1.17
SCFD1-205ENST00000469043 SNX29Q8TEQ0 813 aa7.72□□□□□ -1.17
SCFD1-205ENST00000469043 OSBPL1AQ9BXW6 950 aa7.72□□□□□ -1.17
SCFD1-205ENST00000469043 RNF114Q9Y508 228 aa7.72□□□□□ -1.17
SCFD1-205ENST00000469043 FAM13AO94988 1023 aa7.71□□□□□ -1.18
SCFD1-205ENST00000469043 YBX3P16989 372 aaKnown RBP eCLIP7.71□□□□□ -1.18
SCFD1-205ENST00000469043 CPSF6Q16630 551 aaKnown RBP eCLIP7.71□□□□□ -1.18
SCFD1-205ENST00000469043 PAOXQ6QHF9 649 aa7.71□□□□□ -1.18
SCFD1-205ENST00000469043 FBXL6Q8N531 539 aa7.71□□□□□ -1.18
SCFD1-205ENST00000469043 CCDC9Q9Y3X0 531 aaKnown RBP7.71□□□□□ -1.18
SCFD1-205ENST00000469043 LOC100289279A0A1B0GTE1 492 aa7.7□□□□□ -1.18
SCFD1-205ENST00000469043 FAM95CA0A1B0GW59 222 aa7.7□□□□□ -1.18
SCFD1-205ENST00000469043 SSFA2P28290 1259 aa7.7□□□□□ -1.18
SCFD1-205ENST00000469043 YIPF2Q9BWQ6 316 aa7.7□□□□□ -1.18
SCFD1-205ENST00000469043 BHLHE41Q9C0J9 482 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-205ENST00000469043 ANGEL1Q9UNK9 670 aaKnown RBP7.7□□□□□ -1.18
SCFD1-205ENST00000469043 AMOTL2Q9Y2J4 779 aa7.7□□□□□ -1.18
SCFD1-205ENST00000469043 ZBTB7CA1YPR0 619 aa7.69□□□□□ -1.18
SCFD1-205ENST00000469043 TIAF1O95411 115 aa7.69□□□□□ -1.18
SCFD1-205ENST00000469043 ESRRAP11474 423 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-205ENST00000469043 NPR3P17342 541 aa7.69□□□□□ -1.18
SCFD1-205ENST00000469043 HOXA10P31260 410 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-205ENST00000469043 GSTM4Q03013 218 aa7.69□□□□□ -1.18
SCFD1-205ENST00000469043 METTL22Q9BUU2 404 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-205ENST00000469043 F13BP05160 661 aa7.68□□□□□ -1.18
SCFD1-205ENST00000469043 SF3B2Q13435 895 aaKnown RBP7.68□□□□□ -1.18
SCFD1-205ENST00000469043 MTMR3Q13615 1198 aa7.68□□□□□ -1.18
SCFD1-205ENST00000469043 FOXD3Q9UJU5 478 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-205ENST00000469043 DRD2P14416 443 aa7.67□□□□□ -1.18
SCFD1-205ENST00000469043 FOSL1P15407 271 aa7.67□□□□□ -1.18
SCFD1-205ENST00000469043 FKBP4Q02790 459 aaKnown RBP eCLIP7.67□□□□□ -1.18
SCFD1-205ENST00000469043 SOX4Q06945 474 aaPredicted RBP7.67□□□□□ -1.18
SCFD1-205ENST00000469043 FBLIM1Q8WUP2 373 aa7.67□□□□□ -1.18
SCFD1-205ENST00000469043 ZFYVE28Q9HCC9 887 aa7.67□□□□□ -1.18
SCFD1-205ENST00000469043 PPP1R15AO75807 674 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-205ENST00000469043 DLGAP3O95886 979 aa7.66□□□□□ -1.18
SCFD1-205ENST00000469043 C1orf115Q9H7X2 142 aa7.66□□□□□ -1.18
SCFD1-205ENST00000469043 ZFYVE1Q9HBF4 777 aa7.66□□□□□ -1.18
SCFD1-205ENST00000469043 ADGRE2Q9UHX3 823 aa7.66□□□□□ -1.18
SCFD1-205ENST00000469043 TMEM88BA6NKF7 163 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms