RNA–Protein interactions for RNA: ENST00000468598.5

SFPQ-205, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 2,835 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-205ENST00000468598 SLC27A3Q5K4L6 730 aa8.32□□□□□ -1.08
SFPQ-205ENST00000468598 ATL3Q6DD88 541 aa8.32□□□□□ -1.08
SFPQ-205ENST00000468598 DZIP3Q86Y13 1208 aaKnown RBP8.32□□□□□ -1.08
SFPQ-205ENST00000468598 CKAP2LQ8IYA6 745 aa8.32□□□□□ -1.08
SFPQ-205ENST00000468598 LARP6Q9BRS8 491 aaKnown RBP8.32□□□□□ -1.08
SFPQ-205ENST00000468598 TFCP2L1Q9NZI6 479 aa8.32□□□□□ -1.08
SFPQ-205ENST00000468598 RBM8AQ9Y5S9 174 aaKnown RBP8.32□□□□□ -1.08
SFPQ-205ENST00000468598 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.31□□□□□ -1.08
SFPQ-205ENST00000468598 RPS6KB1P23443 525 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 GPTP24298 496 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 BAG6P46379 1132 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 BLOC1S2Q6QNY1 142 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 ARHGEF1Q92888 912 aaKnown RBP8.31□□□□□ -1.08
SFPQ-205ENST00000468598 IMPACTQ9P2X3 320 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 COL5A3P25940 1745 aaPredicted RBP8.31□□□□□ -1.08
SFPQ-205ENST00000468598 SLC27A2O14975 620 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 SLU7O95391 586 aaKnown RBP8.31□□□□□ -1.08
SFPQ-205ENST00000468598 IL6STP40189 918 aaPredicted RBP8.31□□□□□ -1.08
SFPQ-205ENST00000468598 KRT32Q14532 448 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 BEND3Q5T5X7 828 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 KSR2Q6VAB6 950 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 NECAB1Q8N987 351 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 MYD88Q99836 296 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 CALCOCO1Q9P1Z2 691 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
SFPQ-205ENST00000468598 C4BP0C0L5 1744 aa8.31□□□□□ -1.08
SFPQ-205ENST00000468598 IFIT2P09913 472 aaKnown RBP8.3□□□□□ -1.08
SFPQ-205ENST00000468598 BMS1Q14692 1282 aaKnown RBP8.3□□□□□ -1.08
SFPQ-205ENST00000468598 CCDC144BQ3MJ40 725 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 KMT5BQ4FZB7 885 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 BICDL1Q6ZP65 573 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 CCDC144CPQ8IYA2 1237 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 BICD2Q8TD16 824 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 DNAAF4Q8WXU2 420 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 DNAJC25Q9H1X3 360 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 COL15A1P39059 1388 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 NR1I2O75469 434 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 RPS6KA4O75676 772 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 ALDH1L1O75891 902 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 IGKV5-2P06315 115 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 SKILP12757 684 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 KCNJ4P48050 445 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 SLC20A2Q08357 652 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 RESTQ13127 1097 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 OS9Q13438 667 aaPredicted RBP8.3□□□□□ -1.08
SFPQ-205ENST00000468598 USPL1Q5W0Q7 1092 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 CCAR2Q8N163 923 aaKnown RBP8.3□□□□□ -1.08
SFPQ-205ENST00000468598 SYNE4Q8N205 404 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 PGBD1Q96JS3 809 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 CNTNAP4Q9C0A0 1308 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 A0A0U1RQG5 324 aaPredicted RBP8.3□□□□□ -1.08
SFPQ-205ENST00000468598 KIF6Q6ZMV9 814 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 PLBD2Q8NHP8 589 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 TIGD1Q96MW7 591 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 LLPHQ9BRT6 129 aaKnown RBP8.3□□□□□ -1.08
SFPQ-205ENST00000468598 NAT10Q9H0A0 1025 aaKnown RBP8.3□□□□□ -1.08
SFPQ-205ENST00000468598 OSBPL5Q9H0X9 879 aaPredicted RBP8.3□□□□□ -1.08
SFPQ-205ENST00000468598 L2HGDHQ9H9P8 463 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 ANO10Q9NW15 660 aa8.3□□□□□ -1.08
SFPQ-205ENST00000468598 ZNF215Q9UL58 517 aaPredicted RBP8.3□□□□□ -1.08
SFPQ-205ENST00000468598 NBPF7P0C2Y1 421 aaPredicted RBP8.29□□□□□ -1.08
SFPQ-205ENST00000468598 CCZ1BP86790 482 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 CCZ1P86791 482 aaPredicted RBP8.29□□□□□ -1.08
SFPQ-205ENST00000468598 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 RC3H1Q5TC82 1133 aaKnown RBP8.29□□□□□ -1.08
SFPQ-205ENST00000468598 FERMT3Q86UX7 667 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 COL23A1Q86Y22 540 aaPredicted RBP8.29□□□□□ -1.08
SFPQ-205ENST00000468598 CCDC24Q8N4L8 307 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 AKT1S1Q96B36 256 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 CHMP4CQ96CF2 233 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 CHMP3Q9Y3E7 222 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 PSDA5PKW4 1024 aaPredicted RBP8.29□□□□□ -1.08
SFPQ-205ENST00000468598 CCDC69A6NI79 296 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 CCP110O43303 1012 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 CAMTA2O94983 1202 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 DDX58O95786 925 aaKnown RBP8.29□□□□□ -1.08
SFPQ-205ENST00000468598 RFC4P35249 363 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 TOB2Q14106 344 aaPredicted RBP8.29□□□□□ -1.08
SFPQ-205ENST00000468598 MSL1Q68DK7 614 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 MAP3K15Q6ZN16 1313 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 GTF3C6Q969F1 213 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 TSPYL1Q9H0U9 437 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 TFIP11Q9UBB9 837 aaKnown RBP8.29□□□□□ -1.08
SFPQ-205ENST00000468598 RCOR1Q9UKL0 485 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 TAOK2Q9UL54 1235 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 MED23Q9ULK4 1368 aa8.29□□□□□ -1.08
SFPQ-205ENST00000468598 BECN2A8MW95 431 aa8.28□□□□□ -1.08
SFPQ-205ENST00000468598 H2AFXP16104 143 aaPredicted RBP8.28□□□□□ -1.08
SFPQ-205ENST00000468598 NAA16Q6N069 864 aaPredicted RBP8.28□□□□□ -1.08
SFPQ-205ENST00000468598 CCDC150Q8NCX0 1101 aa8.28□□□□□ -1.08
SFPQ-205ENST00000468598 ZNF592Q92610 1267 aa8.28□□□□□ -1.08
SFPQ-205ENST00000468598 BPIFA3Q9BQP9 254 aa8.28□□□□□ -1.08
SFPQ-205ENST00000468598 METTL22Q9BUU2 404 aaPredicted RBP8.28□□□□□ -1.08
SFPQ-205ENST00000468598 RFX7Q2KHR2 1363 aa8.28□□□□□ -1.08
SFPQ-205ENST00000468598 ATP8B1O43520 1251 aa8.28□□□□□ -1.08
SFPQ-205ENST00000468598 NRDCO43847 1150 aa8.28□□□□□ -1.08
SFPQ-205ENST00000468598 NMIQ13287 307 aaPredicted RBP8.28□□□□□ -1.08
SFPQ-205ENST00000468598 FAM173BQ6P4H8 233 aa8.28□□□□□ -1.08
SFPQ-205ENST00000468598 FBXO38Q6PIJ6 1188 aa8.28□□□□□ -1.08
SFPQ-205ENST00000468598 CEP57L1Q8IYX8 460 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms