RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 MXD3Q9BW11 206 aa24.73■■□□□ 1.55
NPHP4-206ENST00000468253 SCN9AQ15858 1988 aa24.73■■□□□ 1.55
NPHP4-206ENST00000468253 A0A1B0GUL7 405 aa24.72■■□□□ 1.55
NPHP4-206ENST00000468253 SEMA3EO15041 775 aa24.72■■□□□ 1.55
NPHP4-206ENST00000468253 FRAT2O75474 233 aaPredicted RBP24.72■■□□□ 1.55
NPHP4-206ENST00000468253 ITGBL1O95965 494 aaPredicted RBP24.72■■□□□ 1.55
NPHP4-206ENST00000468253 HSPA6P17066 643 aa24.72■■□□□ 1.55
NPHP4-206ENST00000468253 OS9Q13438 667 aaPredicted RBP24.72■■□□□ 1.55
NPHP4-206ENST00000468253 ERC1Q8IUD2 1116 aa24.72■■□□□ 1.55
NPHP4-206ENST00000468253 CNTROBQ8N137 903 aa24.72■■□□□ 1.55
NPHP4-206ENST00000468253 TRPM4Q8TD43 1214 aa24.72■■□□□ 1.55
NPHP4-206ENST00000468253 HDAC9Q9UKV0 1011 aa24.72■■□□□ 1.55
NPHP4-206ENST00000468253 AAMPQ13685 434 aa24.71■■□□□ 1.55
NPHP4-206ENST00000468253 TBC1D10BQ4KMP7 808 aaPredicted RBP24.71■■□□□ 1.55
NPHP4-206ENST00000468253 CERS5Q8N5B7 392 aa24.71■■□□□ 1.55
NPHP4-206ENST00000468253 XAGE2Q96GT9 111 aa24.71■■□□□ 1.55
NPHP4-206ENST00000468253 MYOZ2Q9NPC6 264 aa24.71■■□□□ 1.55
NPHP4-206ENST00000468253 SUGT1Q9Y2Z0 365 aa24.7■■□□□ 1.54
NPHP4-206ENST00000468253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.7■■□□□ 1.54
NPHP4-206ENST00000468253 KIF4BQ2VIQ3 1234 aa24.69■■□□□ 1.54
NPHP4-206ENST00000468253 MFSD14BQ5SR56 506 aa24.69■■□□□ 1.54
NPHP4-206ENST00000468253 RBM26Q5T8P6 1007 aaKnown RBP24.69■■□□□ 1.54
NPHP4-206ENST00000468253 CCDC102BQ68D86 513 aa24.69■■□□□ 1.54
NPHP4-206ENST00000468253 MTMR14Q8NCE2 650 aa24.69■■□□□ 1.54
NPHP4-206ENST00000468253 WDR66Q8TBY9 1149 aa24.69■■□□□ 1.54
NPHP4-206ENST00000468253 NEUROD6Q96NK8 337 aa24.69■■□□□ 1.54
NPHP4-206ENST00000468253 MRIQ9BWK5 157 aa24.69■■□□□ 1.54
NPHP4-206ENST00000468253 RAB11FIP3O75154 756 aa24.68■■□□□ 1.54
NPHP4-206ENST00000468253 EGFRP00533 1210 aa24.68■■□□□ 1.54
NPHP4-206ENST00000468253 MAP1SQ66K74 1059 aaPredicted RBP24.68■■□□□ 1.54
NPHP4-206ENST00000468253 KIAA0825Q8IV33 1275 aa24.68■■□□□ 1.54
NPHP4-206ENST00000468253 DENND2AQ9ULE3 1009 aa24.68■■□□□ 1.54
NPHP4-206ENST00000468253 A0A1B0GUL6 1792 aa24.67■■□□□ 1.54
NPHP4-206ENST00000468253 ADORA1P30542 326 aa24.67■■□□□ 1.54
NPHP4-206ENST00000468253 PHKA1P46020 1223 aa24.67■■□□□ 1.54
NPHP4-206ENST00000468253 TNNI3KQ59H18 835 aa24.67■■□□□ 1.54
NPHP4-206ENST00000468253 IQSEC3Q9UPP2 1182 aaPredicted RBP24.67■■□□□ 1.54
NPHP4-206ENST00000468253 FPGT-TNNI3KV9GXZ4 949 aa24.67■■□□□ 1.54
NPHP4-206ENST00000468253 PASKQ96RG2 1323 aa24.66■■□□□ 1.54
NPHP4-206ENST00000468253 APLP1P51693 650 aa24.66■■□□□ 1.54
NPHP4-206ENST00000468253 SCARF1Q14162 830 aa24.66■■□□□ 1.54
NPHP4-206ENST00000468253 CDC37L1Q7L3B6 337 aa24.66■■□□□ 1.54
NPHP4-206ENST00000468253 HDLBPQ00341 1268 aaKnown RBP24.65■■□□□ 1.54
NPHP4-206ENST00000468253 CHAF1AQ13111 956 aaPredicted RBP24.65■■□□□ 1.54
NPHP4-206ENST00000468253 GORABQ5T7V8 394 aa24.65■■□□□ 1.54
NPHP4-206ENST00000468253 ZBED3Q96IU2 234 aaPredicted RBP24.65■■□□□ 1.54
NPHP4-206ENST00000468253 JAG2Q9Y219 1238 aa24.65■■□□□ 1.54
NPHP4-206ENST00000468253 EXOC6BQ9Y2D4 811 aa24.65■■□□□ 1.54
NPHP4-206ENST00000468253 PDS5AQ29RF7 1337 aaKnown RBP24.64■■□□□ 1.54
NPHP4-206ENST00000468253 DCPSQ96C86 337 aaKnown RBP24.64■■□□□ 1.54
NPHP4-206ENST00000468253 KIF1BPQ96EK5 621 aa24.64■■□□□ 1.54
NPHP4-206ENST00000468253 CRBNQ96SW2 442 aa24.64■■□□□ 1.54
NPHP4-206ENST00000468253 SERPINA10Q9UK55 444 aa24.64■■□□□ 1.54
NPHP4-206ENST00000468253 SUPT16HQ9Y5B9 1047 aaKnown RBP24.64■■□□□ 1.54
NPHP4-206ENST00000468253 PSME4Q14997 1843 aa24.63■■□□□ 1.53
NPHP4-206ENST00000468253 WNT10BO00744 389 aa24.63■■□□□ 1.53
NPHP4-206ENST00000468253 UQCRFS1P1P0C7P4 283 aa24.63■■□□□ 1.53
NPHP4-206ENST00000468253 RHPN1Q8TCX5 695 aa24.63■■□□□ 1.53
NPHP4-206ENST00000468253 ZNF512BQ96KM6 892 aaPredicted RBP24.63■■□□□ 1.53
NPHP4-206ENST00000468253 PITPNM2Q9BZ72 1349 aa24.62■■□□□ 1.53
NPHP4-206ENST00000468253 SALL1Q9NSC2 1324 aa24.62■■□□□ 1.53
NPHP4-206ENST00000468253 ADAMTSL1Q8N6G6 1762 aa24.62■■□□□ 1.53
NPHP4-206ENST00000468253 DLGAP5Q15398 846 aa24.62■■□□□ 1.53
NPHP4-206ENST00000468253 EAF2Q96CJ1 260 aaPredicted RBP24.62■■□□□ 1.53
NPHP4-206ENST00000468253 TTF2Q9UNY4 1162 aaKnown RBP24.62■■□□□ 1.53
NPHP4-206ENST00000468253 NBPF9Q3BBW0 867 aa24.61■■□□□ 1.53
NPHP4-206ENST00000468253 CCDC158Q5M9N0 1113 aa24.61■■□□□ 1.53
NPHP4-206ENST00000468253 ZGPATQ8N5A5 531 aaKnown RBP24.61■■□□□ 1.53
NPHP4-206ENST00000468253 DCTPP1Q9H773 170 aa24.61■■□□□ 1.53
NPHP4-206ENST00000468253 PCDHB15Q9Y5E8 787 aa24.61■■□□□ 1.53
NPHP4-206ENST00000468253 F8W031 263 aaPredicted RBP24.6■■□□□ 1.53
NPHP4-206ENST00000468253 ARID4AP29374 1257 aaPredicted RBP24.6■■□□□ 1.53
NPHP4-206ENST00000468253 CFAP100Q494V2 611 aa24.6■■□□□ 1.53
NPHP4-206ENST00000468253 RASGRF1Q13972 1273 aa24.59■■□□□ 1.53
NPHP4-206ENST00000468253 KRT26Q7Z3Y9 468 aa24.59■■□□□ 1.53
NPHP4-206ENST00000468253 USP48Q86UV5 1035 aa24.59■■□□□ 1.53
NPHP4-206ENST00000468253 CLASRPQ8N2M8 674 aaKnown RBP24.59■■□□□ 1.53
NPHP4-206ENST00000468253 DBNDD2Q9BQY9 259 aa24.59■■□□□ 1.53
NPHP4-206ENST00000468253 MAST3O60307 1309 aa24.59■■□□□ 1.53
NPHP4-206ENST00000468253 SPDYE2BA6NHP3 402 aa24.58■■□□□ 1.53
NPHP4-206ENST00000468253 SPDYE6P0CI01 402 aa24.58■■□□□ 1.53
NPHP4-206ENST00000468253 ANGEL2Q5VTE6 544 aaKnown RBP24.58■■□□□ 1.53
NPHP4-206ENST00000468253 SULF1Q8IWU6 871 aa24.58■■□□□ 1.53
NPHP4-206ENST00000468253 GLIS2Q9BZE0 524 aaPredicted RBP24.58■■□□□ 1.53
NPHP4-206ENST00000468253 CREBZFQ9NS37 354 aa24.58■■□□□ 1.53
NPHP4-206ENST00000468253 TMEM88BA6NKF7 163 aa24.57■■□□□ 1.52
NPHP4-206ENST00000468253 GRIK5Q16478 980 aa24.57■■□□□ 1.52
NPHP4-206ENST00000468253 SPTY2D1Q68D10 685 aaPredicted RBP24.57■■□□□ 1.52
NPHP4-206ENST00000468253 HHIPL2Q6UWX4 724 aa24.57■■□□□ 1.52
NPHP4-206ENST00000468253 SPATA5Q8NB90 893 aa24.57■■□□□ 1.52
NPHP4-206ENST00000468253 PRMT6Q96LA8 375 aaPredicted RBP24.57■■□□□ 1.52
NPHP4-206ENST00000468253 CCDC8Q9H0W5 538 aaPredicted RBP24.57■■□□□ 1.52
NPHP4-206ENST00000468253 GGA3Q9NZ52 723 aa24.57■■□□□ 1.52
NPHP4-206ENST00000468253 HMG20BQ9P0W2 317 aa24.57■■□□□ 1.52
NPHP4-206ENST00000468253 DBNLQ9UJU6 430 aaKnown RBP24.57■■□□□ 1.52
NPHP4-206ENST00000468253 MYO1BO43795 1136 aa24.56■■□□□ 1.52
NPHP4-206ENST00000468253 IGSF3O75054 1194 aa24.56■■□□□ 1.52
NPHP4-206ENST00000468253 LDHBP07195 334 aaKnown RBP24.56■■□□□ 1.52
NPHP4-206ENST00000468253 CRKP46108 304 aa24.56■■□□□ 1.52
NPHP4-206ENST00000468253 ASTN2O75129 1339 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms