RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 CTSWP56202 376 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 ATL3Q6DD88 541 aa15.86■□□□□ 0.13
BRAT1-203ENST00000467558 ERCC4Q92889 916 aaPredicted RBP15.86■□□□□ 0.13
BRAT1-203ENST00000467558 PPP1R12BO60237 982 aaPredicted RBP15.85■□□□□ 0.13
BRAT1-203ENST00000467558 TRAF1Q13077 416 aa15.85■□□□□ 0.13
BRAT1-203ENST00000467558 LLPHQ9BRT6 129 aaKnown RBP15.85■□□□□ 0.13
BRAT1-203ENST00000467558 TAF5LO75529 589 aa15.85■□□□□ 0.13
BRAT1-203ENST00000467558 ZNF397Q8NF99 534 aaPredicted RBP15.85■□□□□ 0.13
BRAT1-203ENST00000467558 TSG101Q99816 390 aa15.85■□□□□ 0.13
BRAT1-203ENST00000467558 HDAC9Q9UKV0 1011 aa15.85■□□□□ 0.13
BRAT1-203ENST00000467558 NDUFB9Q9Y6M9 179 aa15.85■□□□□ 0.13
BRAT1-203ENST00000467558 CAMSAP1Q5T5Y3 1602 aa15.85■□□□□ 0.13
BRAT1-203ENST00000467558 ADGRL3Q9HAR2 1447 aa15.85■□□□□ 0.13
BRAT1-203ENST00000467558 ARHGAP29Q52LW3 1261 aa15.85■□□□□ 0.13
BRAT1-203ENST00000467558 ZFYVE27Q5T4F4 411 aa15.85■□□□□ 0.13
BRAT1-203ENST00000467558 FAM200AQ8TCP9 573 aa15.85■□□□□ 0.13
BRAT1-203ENST00000467558 LAMC1P11047 1609 aa15.85■□□□□ 0.13
BRAT1-203ENST00000467558 TRIM75PA6NK02 468 aa15.84■□□□□ 0.13
BRAT1-203ENST00000467558 ZAP70P43403 619 aa15.84■□□□□ 0.13
BRAT1-203ENST00000467558 GSDMDP57764 484 aa15.84■□□□□ 0.13
BRAT1-203ENST00000467558 PICALMQ13492 652 aa15.84■□□□□ 0.13
BRAT1-203ENST00000467558 FKBP15Q5T1M5 1219 aa15.84■□□□□ 0.13
BRAT1-203ENST00000467558 ANGEL1Q9UNK9 670 aaKnown RBP15.84■□□□□ 0.13
BRAT1-203ENST00000467558 MAP3K15Q6ZN16 1313 aa15.84■□□□□ 0.13
BRAT1-203ENST00000467558 ZSCAN12O43309 604 aa15.84■□□□□ 0.13
BRAT1-203ENST00000467558 PDCL3Q9H2J4 239 aa15.84■□□□□ 0.13
BRAT1-203ENST00000467558 ASAP1Q9ULH1 1129 aa15.84■□□□□ 0.13
BRAT1-203ENST00000467558 SPATA31A3Q5VYP0 1347 aa15.83■□□□□ 0.13
BRAT1-203ENST00000467558 TULP4Q9NRJ4 1543 aa15.83■□□□□ 0.13
BRAT1-203ENST00000467558 QRICH2Q9H0J4 1663 aa15.83■□□□□ 0.13
BRAT1-203ENST00000467558 B4E1Z4 1266 aa15.83■□□□□ 0.13
BRAT1-203ENST00000467558 DSCC1Q9BVC3 393 aa15.83■□□□□ 0.13
BRAT1-203ENST00000467558 PTPN14Q15678 1187 aa15.83■□□□□ 0.12
BRAT1-203ENST00000467558 GIGYF2Q6Y7W6 1299 aaKnown RBP15.83■□□□□ 0.12
BRAT1-203ENST00000467558 SPATA5Q8NB90 893 aa15.83■□□□□ 0.12
BRAT1-203ENST00000467558 MARCKSP29966 332 aaPredicted RBP15.83■□□□□ 0.12
BRAT1-203ENST00000467558 WWC2Q6AWC2 1192 aa15.83■□□□□ 0.12
BRAT1-203ENST00000467558 BRINP3Q76B58 766 aa15.83■□□□□ 0.12
BRAT1-203ENST00000467558 ARMT1Q9H993 441 aa15.83■□□□□ 0.12
BRAT1-203ENST00000467558 USP31Q70CQ4 1352 aa15.83■□□□□ 0.12
BRAT1-203ENST00000467558 XRCC6P12956 609 aaKnown RBP eCLIP15.82■□□□□ 0.12
BRAT1-203ENST00000467558 IDEP14735 1019 aa15.82■□□□□ 0.12
BRAT1-203ENST00000467558 HEATR3Q7Z4Q2 680 aa15.82■□□□□ 0.12
BRAT1-203ENST00000467558 WDR66Q8TBY9 1149 aa15.82■□□□□ 0.12
BRAT1-203ENST00000467558 EDC3Q96F86 508 aaKnown RBP15.82■□□□□ 0.12
BRAT1-203ENST00000467558 LOC102724428A0A0B4J2F2 783 aa15.82■□□□□ 0.12
BRAT1-203ENST00000467558 SIK1P57059 783 aa15.82■□□□□ 0.12
BRAT1-203ENST00000467558 PTCH1Q13635 1447 aa15.82■□□□□ 0.12
BRAT1-203ENST00000467558 JAG2Q9Y219 1238 aa15.82■□□□□ 0.12
BRAT1-203ENST00000467558 CDC42BPGQ6DT37 1551 aa15.82■□□□□ 0.12
BRAT1-203ENST00000467558 UFL1O94874 794 aa15.82■□□□□ 0.12
BRAT1-203ENST00000467558 TTC6Q86TZ1 520 aa15.82■□□□□ 0.12
BRAT1-203ENST00000467558 IL6STP40189 918 aaPredicted RBP15.82■□□□□ 0.12
BRAT1-203ENST00000467558 RPS8P62241 208 aaKnown RBP15.82■□□□□ 0.12
BRAT1-203ENST00000467558 ZNF335Q9H4Z2 1342 aaPredicted RBP15.82■□□□□ 0.12
BRAT1-203ENST00000467558 LRRC27Q9C0I9 530 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 AGLP35573 1532 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 PRAMEF22A3QJZ6 481 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 RIMBP2O15034 1052 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 RXRAP19793 462 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 CDR1P51861 262 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 ISM2Q6H9L7 571 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 NAPAP54920 295 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 ANO6Q4KMQ2 910 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 HAUS7Q99871 368 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 RBM28Q9NW13 759 aaKnown RBP15.81■□□□□ 0.12
BRAT1-203ENST00000467558 GGA1Q9UJY5 639 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 ARHGEF40Q8TER5 1519 aa15.81■□□□□ 0.12
BRAT1-203ENST00000467558 CERS3Q8IU89 383 aa15.8■□□□□ 0.12
BRAT1-203ENST00000467558 RMND1Q9NWS8 449 aa15.8■□□□□ 0.12
BRAT1-203ENST00000467558 MYO6Q9UM54 1294 aa15.8■□□□□ 0.12
BRAT1-203ENST00000467558 ZNF532Q9HCE3 1301 aa15.8■□□□□ 0.12
BRAT1-203ENST00000467558 KIAA1328Q86T90 577 aa15.8■□□□□ 0.12
BRAT1-203ENST00000467558 SIRT2Q8IXJ6 389 aa15.8■□□□□ 0.12
BRAT1-203ENST00000467558 C6orf50Q9HD87 102 aa15.8■□□□□ 0.12
BRAT1-203ENST00000467558 TEX11Q8IYF3 940 aa15.8■□□□□ 0.12
BRAT1-203ENST00000467558 ZKSCAN3Q9BRR0 538 aa15.8■□□□□ 0.12
BRAT1-203ENST00000467558 NCAPD2Q15021 1401 aa15.8■□□□□ 0.12
BRAT1-203ENST00000467558 CCDC181Q5TID7 509 aa15.8■□□□□ 0.12
BRAT1-203ENST00000467558 ZNF771Q7L3S4 317 aaPredicted RBP15.8■□□□□ 0.12
BRAT1-203ENST00000467558 GPR108Q9NPR9 543 aa15.79■□□□□ 0.12
BRAT1-203ENST00000467558 HEG1Q9ULI3 1381 aa15.79■□□□□ 0.12
BRAT1-203ENST00000467558 UQCRHLA0A096LP55 91 aa15.79■□□□□ 0.12
BRAT1-203ENST00000467558 A0A0D9SFI3 127 aa15.79■□□□□ 0.12
BRAT1-203ENST00000467558 UQCRHP07919 91 aa15.79■□□□□ 0.12
BRAT1-203ENST00000467558 KRT2P35908 639 aa15.79■□□□□ 0.12
BRAT1-203ENST00000467558 KIF18AQ8NI77 898 aa15.79■□□□□ 0.12
BRAT1-203ENST00000467558 LRRC24Q50LG9 513 aa15.79■□□□□ 0.12
BRAT1-203ENST00000467558 TMC6Q7Z403 805 aa15.79■□□□□ 0.12
BRAT1-203ENST00000467558 KIDINS220Q9ULH0 1771 aa15.79■□□□□ 0.12
BRAT1-203ENST00000467558 ZBTB1Q9Y2K1 713 aa15.78■□□□□ 0.12
BRAT1-203ENST00000467558 GNA11P29992 359 aa15.78■□□□□ 0.12
BRAT1-203ENST00000467558 CACNA2D4Q7Z3S7 1137 aa15.78■□□□□ 0.12
BRAT1-203ENST00000467558 RRP36Q96EU6 259 aaKnown RBP15.78■□□□□ 0.12
BRAT1-203ENST00000467558 UBA5Q9GZZ9 404 aa15.78■□□□□ 0.12
BRAT1-203ENST00000467558 PTPRMP28827 1452 aa15.78■□□□□ 0.12
BRAT1-203ENST00000467558 TYRO3Q06418 890 aa15.78■□□□□ 0.12
BRAT1-203ENST00000467558 NEXMIFQ5QGS0 1516 aa15.78■□□□□ 0.12
BRAT1-203ENST00000467558 CIAO1O76071 339 aa15.78■□□□□ 0.12
BRAT1-203ENST00000467558 MTIF2P46199 727 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms