RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 ZNF804AQ7Z570 1209 aa18.78■□□□□ 0.6
MRPL55-225ENST00000465268 FAM84BQ96KN1 310 aaPredicted RBP18.78■□□□□ 0.6
MRPL55-225ENST00000465268 NOB1Q9ULX3 412 aaKnown RBP18.78■□□□□ 0.6
MRPL55-225ENST00000465268 POLR2AP24928 1970 aaKnown RBP18.77■□□□□ 0.6
MRPL55-225ENST00000465268 SLC10A3P09131 477 aa18.77■□□□□ 0.6
MRPL55-225ENST00000465268 UBE4AQ14139 1066 aa18.77■□□□□ 0.6
MRPL55-225ENST00000465268 BEGAINQ9BUH8 593 aa18.77■□□□□ 0.6
MRPL55-225ENST00000465268 UBE2Q2LH0YL09 131 aa18.76■□□□□ 0.59
MRPL55-225ENST00000465268 RFX5P48382 616 aaPredicted RBP18.76■□□□□ 0.59
MRPL55-225ENST00000465268 RASAL3Q86YV0 1011 aa18.76■□□□□ 0.59
MRPL55-225ENST00000465268 VGLL2Q8N8G2 317 aa18.76■□□□□ 0.59
MRPL55-225ENST00000465268 TDRD7Q8NHU6 1098 aaKnown RBP18.76■□□□□ 0.59
MRPL55-225ENST00000465268 HDAC9Q9UKV0 1011 aa18.76■□□□□ 0.59
MRPL55-225ENST00000465268 GRIK5Q16478 980 aa18.75■□□□□ 0.59
MRPL55-225ENST00000465268 CCDC102AQ96A19 550 aa18.75■□□□□ 0.59
MRPL55-225ENST00000465268 FZD1Q9UP38 647 aa18.75■□□□□ 0.59
MRPL55-225ENST00000465268 MROH5Q6ZUA9 1318 aa18.74■□□□□ 0.59
MRPL55-225ENST00000465268 A0A1B0GUL6 1792 aa18.74■□□□□ 0.59
MRPL55-225ENST00000465268 HIBADHP31937 336 aaKnown RBP18.74■□□□□ 0.59
MRPL55-225ENST00000465268 RARSP54136 660 aaKnown RBP18.74■□□□□ 0.59
MRPL55-225ENST00000465268 DLGAP5Q15398 846 aa18.74■□□□□ 0.59
MRPL55-225ENST00000465268 CFAP100Q494V2 611 aa18.74■□□□□ 0.59
MRPL55-225ENST00000465268 PRMT6Q96LA8 375 aaPredicted RBP18.74■□□□□ 0.59
MRPL55-225ENST00000465268 CSRNP1Q96S65 589 aa18.74■□□□□ 0.59
MRPL55-225ENST00000465268 IQSEC3Q9UPP2 1182 aaPredicted RBP18.74■□□□□ 0.59
MRPL55-225ENST00000465268 FAM205AQ6ZU69 1335 aa18.74■□□□□ 0.59
MRPL55-225ENST00000465268 MMP14P50281 582 aa18.73■□□□□ 0.59
MRPL55-225ENST00000465268 FKBP1AP62942 108 aaKnown RBP18.73■□□□□ 0.59
MRPL55-225ENST00000465268 FKBP1BP68106 108 aa18.73■□□□□ 0.59
MRPL55-225ENST00000465268 PRKG1Q13976 671 aa18.73■□□□□ 0.59
MRPL55-225ENST00000465268 METTL24Q5JXM2 366 aa18.73■□□□□ 0.59
MRPL55-225ENST00000465268 FBXO33Q7Z6M2 555 aa18.73■□□□□ 0.59
MRPL55-225ENST00000465268 MTMR14Q8NCE2 650 aa18.73■□□□□ 0.59
MRPL55-225ENST00000465268 CLRN2A0PK11 232 aa18.72■□□□□ 0.59
MRPL55-225ENST00000465268 PTPN12Q05209 780 aaKnown RBP18.72■□□□□ 0.59
MRPL55-225ENST00000465268 SPDYE2BA6NHP3 402 aa18.71■□□□□ 0.59
MRPL55-225ENST00000465268 CA12O43570 354 aa18.71■□□□□ 0.59
MRPL55-225ENST00000465268 PDE8BO95263 885 aa18.71■□□□□ 0.59
MRPL55-225ENST00000465268 CT47B1P0C2W7 299 aaPredicted RBP18.71■□□□□ 0.59
MRPL55-225ENST00000465268 SPDYE6P0CI01 402 aa18.71■□□□□ 0.59
MRPL55-225ENST00000465268 BCAMP50895 628 aa18.71■□□□□ 0.59
MRPL55-225ENST00000465268 MFSD14BQ5SR56 506 aa18.71■□□□□ 0.59
MRPL55-225ENST00000465268 APOBEC3FQ8IUX4 373 aaKnown RBP18.71■□□□□ 0.59
MRPL55-225ENST00000465268 MIER1Q8N108 512 aa18.71■□□□□ 0.59
MRPL55-225ENST00000465268 DEFB129Q9H1M3 183 aa18.71■□□□□ 0.59
MRPL55-225ENST00000465268 RNF186Q9NXI6 227 aa18.71■□□□□ 0.59
MRPL55-225ENST00000465268 TNNQ9UQP3 1299 aa18.71■□□□□ 0.59
MRPL55-225ENST00000465268 FGFR2P21802 821 aa18.7■□□□□ 0.58
MRPL55-225ENST00000465268 TTLL12Q14166 644 aaPredicted RBP18.7■□□□□ 0.58
MRPL55-225ENST00000465268 ATG9AQ7Z3C6 839 aa18.69■□□□□ 0.58
MRPL55-225ENST00000465268 ABHD8Q96I13 439 aa18.69■□□□□ 0.58
MRPL55-225ENST00000465268 SSC5DA1L4H1 1573 aa18.68■□□□□ 0.58
MRPL55-225ENST00000465268 PAPPA2Q9BXP8 1791 aa18.68■□□□□ 0.58
MRPL55-225ENST00000465268 EYA2O00167 538 aa18.68■□□□□ 0.58
MRPL55-225ENST00000465268 TRPA1O75762 1119 aa18.68■□□□□ 0.58
MRPL55-225ENST00000465268 RBM5P52756 815 aaKnown RBP eCLIP18.68■□□□□ 0.581e-8■■■■■ 47.1
MRPL55-225ENST00000465268 MKRN3Q13064 507 aaKnown RBP18.68■□□□□ 0.58
MRPL55-225ENST00000465268 CHAF1AQ13111 956 aaPredicted RBP18.68■□□□□ 0.58
MRPL55-225ENST00000465268 MEIS3Q99687 375 aa18.68■□□□□ 0.58
MRPL55-225ENST00000465268 API5Q9BZZ5 524 aaKnown RBP18.68■□□□□ 0.58
MRPL55-225ENST00000465268 VEZTQ9HBM0 779 aa18.68■□□□□ 0.58
MRPL55-225ENST00000465268 TTF2Q9UNY4 1162 aaKnown RBP18.68■□□□□ 0.58
MRPL55-225ENST00000465268 LRRFIP2Q9Y608 721 aaKnown RBP18.68■□□□□ 0.58
MRPL55-225ENST00000465268 UBTFL1P0CB47 393 aaPredicted RBP18.67■□□□□ 0.58
MRPL55-225ENST00000465268 LDLRAD1Q5T700 205 aa18.67■□□□□ 0.58
MRPL55-225ENST00000465268 PA2G4Q9UQ80 394 aaKnown RBP18.67■□□□□ 0.58
MRPL55-225ENST00000465268 BCAR3O75815 825 aa18.66■□□□□ 0.58
MRPL55-225ENST00000465268 NF2P35240 595 aa18.66■□□□□ 0.58
MRPL55-225ENST00000465268 NBPF12Q5TAG4 269 aaPredicted RBP18.66■□□□□ 0.58
MRPL55-225ENST00000465268 VPS37DQ86XT2 251 aa18.66■□□□□ 0.58
MRPL55-225ENST00000465268 CDAN1Q8IWY9 1227 aa18.66■□□□□ 0.58
MRPL55-225ENST00000465268 SIL1Q9H173 461 aa18.66■□□□□ 0.58
MRPL55-225ENST00000465268 TDRD3Q9H7E2 651 aaKnown RBP18.66■□□□□ 0.58
MRPL55-225ENST00000465268 ZNF70Q9UC06 446 aaPredicted RBP18.66■□□□□ 0.58
MRPL55-225ENST00000465268 ANGEL1Q9UNK9 670 aaKnown RBP18.66■□□□□ 0.58
MRPL55-225ENST00000465268 CRKP46108 304 aa18.65■□□□□ 0.58
MRPL55-225ENST00000465268 RASA3Q14644 834 aa18.65■□□□□ 0.58
MRPL55-225ENST00000465268 PUM3Q15397 648 aaKnown RBP18.65■□□□□ 0.58
MRPL55-225ENST00000465268 MCOLN1Q9GZU1 580 aa18.65■□□□□ 0.58
MRPL55-225ENST00000465268 SAGE1Q9NXZ1 904 aa18.65■□□□□ 0.58
MRPL55-225ENST00000465268 SERPINA10Q9UK55 444 aa18.65■□□□□ 0.58
MRPL55-225ENST00000465268 SPDYE2Q495Y8 402 aa18.64■□□□□ 0.57
MRPL55-225ENST00000465268 CAVIN4Q5BKX8 364 aa18.64■□□□□ 0.57
MRPL55-225ENST00000465268 ARMC9Q7Z3E5 817 aa18.64■□□□□ 0.57
MRPL55-225ENST00000465268 DZIP1LQ8IYY4 767 aaKnown RBP18.64■□□□□ 0.57
MRPL55-225ENST00000465268 CLMNQ96JQ2 1002 aa18.64■□□□□ 0.57
MRPL55-225ENST00000465268 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.64■□□□□ 0.57
MRPL55-225ENST00000465268 MYO1BO43795 1136 aa18.63■□□□□ 0.57
MRPL55-225ENST00000465268 INTS3Q68E01 1043 aaKnown RBP18.63■□□□□ 0.57
MRPL55-225ENST00000465268 FRAT2O75474 233 aaPredicted RBP18.62■□□□□ 0.57
MRPL55-225ENST00000465268 USP2O75604 605 aaPredicted RBP18.62■□□□□ 0.57
MRPL55-225ENST00000465268 IFIT1P09914 478 aaKnown RBP18.62■□□□□ 0.57
MRPL55-225ENST00000465268 TRIM27P14373 513 aa18.62■□□□□ 0.57
MRPL55-225ENST00000465268 MAP3K11Q16584 847 aa18.62■□□□□ 0.57
MRPL55-225ENST00000465268 LPIN2Q92539 896 aa18.62■□□□□ 0.57
MRPL55-225ENST00000465268 ARHGAP45Q92619 1136 aa18.62■□□□□ 0.57
MRPL55-225ENST00000465268 PPP2R3BQ9Y5P8 575 aa18.62■□□□□ 0.57
MRPL55-225ENST00000465268 COL1A1P02452 1464 aaPredicted RBP18.62■□□□□ 0.57
MRPL55-225ENST00000465268 KIF16BQ96L93 1317 aa18.61■□□□□ 0.57
MRPL55-225ENST00000465268 TCP10L2B9ZVM9 353 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms