RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 TLR7Q9NYK1 1049 aaKnown RBP23.32■■□□□ 1.32
LMNB1-204ENST00000463908 GPRC5DQ9NZD1 345 aa23.32■■□□□ 1.32
LMNB1-204ENST00000463908 SMARCA5O60264 1052 aaPredicted RBP23.31■■□□□ 1.32
LMNB1-204ENST00000463908 RPS12P25398 132 aaKnown RBP23.31■■□□□ 1.32
LMNB1-204ENST00000463908 AGBL3Q8NEM8 1001 aa23.31■■□□□ 1.32
LMNB1-204ENST00000463908 CNOT7Q9UIV1 285 aaKnown RBP23.31■■□□□ 1.32
LMNB1-204ENST00000463908 DBNLQ9UJU6 430 aaKnown RBP23.31■■□□□ 1.32
LMNB1-204ENST00000463908 ZBTB22O15209 634 aa23.3■■□□□ 1.32
LMNB1-204ENST00000463908 TAF1DQ9H5J8 278 aaPredicted RBP23.3■■□□□ 1.32
LMNB1-204ENST00000463908 HACL1Q9UJ83 578 aa23.3■■□□□ 1.32
LMNB1-204ENST00000463908 ZNF646O15015 1829 aaPredicted RBP23.29■■□□□ 1.32
LMNB1-204ENST00000463908 AACSQ86V21 672 aa23.29■■□□□ 1.32
LMNB1-204ENST00000463908 LRRCC1Q9C099 1032 aa23.29■■□□□ 1.32
LMNB1-204ENST00000463908 IQCA1LA6NCM1 817 aa23.28■■□□□ 1.32
LMNB1-204ENST00000463908 FRAT2O75474 233 aaPredicted RBP23.28■■□□□ 1.32
LMNB1-204ENST00000463908 EPHX2P34913 555 aa23.28■■□□□ 1.32
LMNB1-204ENST00000463908 FKBP1AP62942 108 aaKnown RBP23.28■■□□□ 1.32
LMNB1-204ENST00000463908 CHAF1AQ13111 956 aaPredicted RBP23.28■■□□□ 1.32
LMNB1-204ENST00000463908 GORABQ5T7V8 394 aa23.28■■□□□ 1.32
LMNB1-204ENST00000463908 MICALL2Q8IY33 904 aa23.28■■□□□ 1.32
LMNB1-204ENST00000463908 CLASRPQ8N2M8 674 aaKnown RBP23.28■■□□□ 1.32
LMNB1-204ENST00000463908 RWDD1Q9H446 243 aaPredicted RBP23.28■■□□□ 1.32
LMNB1-204ENST00000463908 GNL3LQ9NVN8 582 aaKnown RBP23.28■■□□□ 1.32
LMNB1-204ENST00000463908 PSME4Q14997 1843 aa23.28■■□□□ 1.32
LMNB1-204ENST00000463908 ARAP2Q8WZ64 1704 aa23.28■■□□□ 1.32
LMNB1-204ENST00000463908 LMOD1P29536 600 aaPredicted RBP23.27■■□□□ 1.32
LMNB1-204ENST00000463908 GRIK5Q16478 980 aa23.27■■□□□ 1.32
LMNB1-204ENST00000463908 BCL11AQ9H165 835 aa23.27■■□□□ 1.32
LMNB1-204ENST00000463908 COL1A1P02452 1464 aaPredicted RBP23.27■■□□□ 1.32
LMNB1-204ENST00000463908 USP17L8P0C7I0 530 aa23.26■■□□□ 1.31
LMNB1-204ENST00000463908 APLP1P51693 650 aa23.26■■□□□ 1.31
LMNB1-204ENST00000463908 ZNF280AP59817 542 aaPredicted RBP23.26■■□□□ 1.31
LMNB1-204ENST00000463908 RASGRF1Q13972 1273 aa23.26■■□□□ 1.31
LMNB1-204ENST00000463908 SCARF1Q14162 830 aa23.26■■□□□ 1.31
LMNB1-204ENST00000463908 MFSD14BQ5SR56 506 aa23.26■■□□□ 1.31
LMNB1-204ENST00000463908 MYO3BQ8WXR4 1341 aa23.26■■□□□ 1.31
LMNB1-204ENST00000463908 H7C1D1 291 aa23.25■■□□□ 1.31
LMNB1-204ENST00000463908 SEMA3EO15041 775 aa23.25■■□□□ 1.31
LMNB1-204ENST00000463908 EGFRP00533 1210 aa23.25■■□□□ 1.31
LMNB1-204ENST00000463908 ARID4AP29374 1257 aaPredicted RBP23.25■■□□□ 1.31
LMNB1-204ENST00000463908 HIRAP54198 1017 aaPredicted RBP23.25■■□□□ 1.31
LMNB1-204ENST00000463908 SAMD7Q7Z3H4 446 aa23.25■■□□□ 1.31
LMNB1-204ENST00000463908 KIAA0825Q8IV33 1275 aa23.25■■□□□ 1.31
LMNB1-204ENST00000463908 HMG20BQ9P0W2 317 aa23.25■■□□□ 1.31
LMNB1-204ENST00000463908 DENND2AQ9ULE3 1009 aa23.25■■□□□ 1.31
LMNB1-204ENST00000463908 TOMM70O94826 608 aa23.24■■□□□ 1.31
LMNB1-204ENST00000463908 POTEIP0CG38 1075 aa23.24■■□□□ 1.31
LMNB1-204ENST00000463908 POTEJP0CG39 1038 aa23.24■■□□□ 1.31
LMNB1-204ENST00000463908 CCDC158Q5M9N0 1113 aa23.24■■□□□ 1.31
LMNB1-204ENST00000463908 PI16Q6UXB8 463 aa23.24■■□□□ 1.31
LMNB1-204ENST00000463908 SMC5Q8IY18 1101 aa23.24■■□□□ 1.31
LMNB1-204ENST00000463908 GCC1Q96CN9 775 aa23.24■■□□□ 1.31
LMNB1-204ENST00000463908 ZNF512BQ96KM6 892 aaPredicted RBP23.24■■□□□ 1.31
LMNB1-204ENST00000463908 ADARB2Q9NS39 739 aaKnown RBP23.24■■□□□ 1.31
LMNB1-204ENST00000463908 SCN4AP35499 1836 aa23.24■■□□□ 1.31
LMNB1-204ENST00000463908 IFIT2P09913 472 aaKnown RBP23.23■■□□□ 1.31
LMNB1-204ENST00000463908 UQCRFS1P1P0C7P4 283 aa23.23■■□□□ 1.31
LMNB1-204ENST00000463908 MCAMP43121 646 aa23.23■■□□□ 1.31
LMNB1-204ENST00000463908 WDR66Q8TBY9 1149 aa23.23■■□□□ 1.31
LMNB1-204ENST00000463908 F8W031 263 aaPredicted RBP23.22■■□□□ 1.31
LMNB1-204ENST00000463908 TTC39AQ5SRH9 613 aa23.22■■□□□ 1.31
LMNB1-204ENST00000463908 RBM26Q5T8P6 1007 aaKnown RBP23.22■■□□□ 1.31
LMNB1-204ENST00000463908 C16orf71Q8IYS4 520 aaPredicted RBP23.22■■□□□ 1.31
LMNB1-204ENST00000463908 TRPM4Q8TD43 1214 aa23.22■■□□□ 1.31
LMNB1-204ENST00000463908 TBC1D22AQ8WUA7 517 aa23.22■■□□□ 1.31
LMNB1-204ENST00000463908 PCNTO95613 3336 aa23.21■■□□□ 1.31
LMNB1-204ENST00000463908 TBC1D10BQ4KMP7 808 aaPredicted RBP23.21■■□□□ 1.31
LMNB1-204ENST00000463908 ANKRD45Q5TZF3 282 aa23.21■■□□□ 1.31
LMNB1-204ENST00000463908 USP50Q70EL3 339 aaPredicted RBP23.21■■□□□ 1.31
LMNB1-204ENST00000463908 PNMA8AQ86V59 439 aaPredicted RBP23.21■■□□□ 1.31
LMNB1-204ENST00000463908 SPATA5Q8NB90 893 aa23.21■■□□□ 1.31
LMNB1-204ENST00000463908 SNRKQ9NRH2 765 aa23.21■■□□□ 1.31
LMNB1-204ENST00000463908 PDS5AQ29RF7 1337 aaKnown RBP23.21■■□□□ 1.31
LMNB1-204ENST00000463908 SALL1Q9NSC2 1324 aa23.2■■□□□ 1.3
LMNB1-204ENST00000463908 EAPPQ56P03 285 aaPredicted RBP23.2■■□□□ 1.3
LMNB1-204ENST00000463908 DNAJC5GQ8N7S2 189 aa23.2■■□□□ 1.3
LMNB1-204ENST00000463908 MYOZ2Q9NPC6 264 aa23.2■■□□□ 1.3
LMNB1-204ENST00000463908 TBC1D9Q6ZT07 1266 aa23.19■■□□□ 1.3
LMNB1-204ENST00000463908 OGFOD1Q8N543 542 aa23.19■■□□□ 1.3
LMNB1-204ENST00000463908 TTF2Q9UNY4 1162 aaKnown RBP23.19■■□□□ 1.3
LMNB1-204ENST00000463908 PCDHAC2Q9Y5I4 1007 aa23.19■■□□□ 1.3
LMNB1-204ENST00000463908 MMP14P50281 582 aa23.18■■□□□ 1.3
LMNB1-204ENST00000463908 B4GALNT3Q6L9W6 998 aa23.18■■□□□ 1.3
LMNB1-204ENST00000463908 OTUD7AQ8TE49 926 aaPredicted RBP23.18■■□□□ 1.3
LMNB1-204ENST00000463908 ZBED3Q96IU2 234 aaPredicted RBP23.18■■□□□ 1.3
LMNB1-204ENST00000463908 PGAP2Q9UHJ9 254 aa23.18■■□□□ 1.3
LMNB1-204ENST00000463908 SUGT1Q9Y2Z0 365 aa23.18■■□□□ 1.3
LMNB1-204ENST00000463908 PRDX5P30044 214 aa23.17■■□□□ 1.3
LMNB1-204ENST00000463908 ZAP70P43403 619 aa23.17■■□□□ 1.3
LMNB1-204ENST00000463908 KIF4BQ2VIQ3 1234 aa23.17■■□□□ 1.3
LMNB1-204ENST00000463908 HDAC9Q9UKV0 1011 aa23.17■■□□□ 1.3
LMNB1-204ENST00000463908 NDUFB9Q9Y6M9 179 aa23.17■■□□□ 1.3
LMNB1-204ENST00000463908 CYP2E1P05181 493 aaPredicted RBP23.16■■□□□ 1.3
LMNB1-204ENST00000463908 LDHDQ86WU2 507 aa23.16■■□□□ 1.3
LMNB1-204ENST00000463908 RBM46Q8TBY0 533 aaKnown RBP23.16■■□□□ 1.3
LMNB1-204ENST00000463908 ASTN2O75129 1339 aaPredicted RBP23.15■■□□□ 1.3
LMNB1-204ENST00000463908 ATP5JP18859 108 aa23.15■■□□□ 1.3
LMNB1-204ENST00000463908 NUCB1Q02818 461 aa23.15■■□□□ 1.3
LMNB1-204ENST00000463908 NBPF9Q3BBW0 867 aa23.15■■□□□ 1.3
LMNB1-204ENST00000463908 MTMR14Q8NCE2 650 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms