RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 FAM205AQ6ZU69 1335 aa16.74■□□□□ 0.27
COMMD3-205ENST00000463688 EYA2O00167 538 aa16.73■□□□□ 0.27
COMMD3-205ENST00000463688 IL15P40933 162 aaPredicted RBP16.73■□□□□ 0.27
COMMD3-205ENST00000463688 ANGEL2Q5VTE6 544 aaKnown RBP16.73■□□□□ 0.27
COMMD3-205ENST00000463688 TXNRD3Q86VQ6 643 aa16.73■□□□□ 0.27
COMMD3-205ENST00000463688 HUNKP57058 714 aa16.72■□□□□ 0.27
COMMD3-205ENST00000463688 TNFAIP1Q13829 316 aa16.72■□□□□ 0.27
COMMD3-205ENST00000463688 FTSJ3Q8IY81 847 aaKnown RBP16.72■□□□□ 0.27
COMMD3-205ENST00000463688 TDRD7Q8NHU6 1098 aaKnown RBP16.72■□□□□ 0.27
COMMD3-205ENST00000463688 LPIN2Q92539 896 aa16.72■□□□□ 0.27
COMMD3-205ENST00000463688 FRAT1Q92837 279 aaPredicted RBP16.72■□□□□ 0.27
COMMD3-205ENST00000463688 CHMP4BQ9H444 224 aaKnown RBP16.72■□□□□ 0.27
COMMD3-205ENST00000463688 MAST3O60307 1309 aa16.72■□□□□ 0.27
COMMD3-205ENST00000463688 WNT10BO00744 389 aa16.71■□□□□ 0.27
COMMD3-205ENST00000463688 GNAI2P04899 355 aa16.71■□□□□ 0.27
COMMD3-205ENST00000463688 KIAA0825Q8IV33 1275 aa16.71■□□□□ 0.27
COMMD3-205ENST00000463688 PRDM10Q9NQV6 1147 aa16.71■□□□□ 0.27
COMMD3-205ENST00000463688 SERPINA10Q9UK55 444 aa16.71■□□□□ 0.27
COMMD3-205ENST00000463688 AKAP2Q9Y2D5 859 aa16.71■□□□□ 0.27
COMMD3-205ENST00000463688 SHTN1A0MZ66 631 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 UNCXA6NJT0 531 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 HDLBPQ00341 1268 aaKnown RBP16.7■□□□□ 0.26
COMMD3-205ENST00000463688 SUPT20HL1Q3ZLR7 823 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 MFSD14BQ5SR56 506 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 FBXO33Q7Z6M2 555 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 FAM84BQ96KN1 310 aaPredicted RBP16.7■□□□□ 0.26
COMMD3-205ENST00000463688 MRIQ9BWK5 157 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 WBP1LQ9NX94 342 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 SEMA3EO15041 775 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 RGMBQ6NW40 437 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 ARMC9Q7Z3E5 817 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 WDR66Q8TBY9 1149 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 CDCA5Q96FF9 252 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 COPRSQ9NQ92 184 aa16.7■□□□□ 0.26
COMMD3-205ENST00000463688 IRS2Q9Y4H2 1338 aa16.69■□□□□ 0.26
COMMD3-205ENST00000463688 ZBTB22O15209 634 aa16.69■□□□□ 0.26
COMMD3-205ENST00000463688 KLRK1P26718 216 aa16.69■□□□□ 0.26
COMMD3-205ENST00000463688 RBM5P52756 815 aaKnown RBP eCLIP16.69■□□□□ 0.26
COMMD3-205ENST00000463688 PUS3Q9BZE2 481 aaKnown RBP16.69■□□□□ 0.26
COMMD3-205ENST00000463688 RNF216Q9NWF9 866 aaPredicted RBP16.69■□□□□ 0.26
COMMD3-205ENST00000463688 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
COMMD3-205ENST00000463688 COL1A1P02452 1464 aaPredicted RBP16.68■□□□□ 0.26
COMMD3-205ENST00000463688 COL4A1P02462 1669 aa16.68■□□□□ 0.26
COMMD3-205ENST00000463688 WTIPA6NIX2 430 aaPredicted RBP16.68■□□□□ 0.26
COMMD3-205ENST00000463688 PPP1R12BO60237 982 aaPredicted RBP16.68■□□□□ 0.26
COMMD3-205ENST00000463688 EGFRP00533 1210 aa16.68■□□□□ 0.26
COMMD3-205ENST00000463688 TRIM27P14373 513 aa16.68■□□□□ 0.26
COMMD3-205ENST00000463688 TNNI2P48788 182 aa16.68■□□□□ 0.26
COMMD3-205ENST00000463688 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
COMMD3-205ENST00000463688 MTX1Q13505 466 aa16.68■□□□□ 0.26
COMMD3-205ENST00000463688 ZGPATQ8N5A5 531 aaKnown RBP16.68■□□□□ 0.26
COMMD3-205ENST00000463688 HOOK2Q96ED9 719 aa16.68■□□□□ 0.26
COMMD3-205ENST00000463688 ADM5C9JUS6 153 aa16.67■□□□□ 0.26
COMMD3-205ENST00000463688 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
COMMD3-205ENST00000463688 HOXD11P31277 338 aaPredicted RBP16.67■□□□□ 0.26
COMMD3-205ENST00000463688 GYG1P46976 350 aa16.67■□□□□ 0.26
COMMD3-205ENST00000463688 ZNF157P51786 506 aaPredicted RBP16.67■□□□□ 0.26
COMMD3-205ENST00000463688 GRM1Q13255 1194 aa16.67■□□□□ 0.26
COMMD3-205ENST00000463688 NBPF9Q3BBW0 867 aa16.67■□□□□ 0.26
COMMD3-205ENST00000463688 LRRC24Q50LG9 513 aa16.67■□□□□ 0.26
COMMD3-205ENST00000463688 CYP4F22Q6NT55 531 aa16.67■□□□□ 0.26
COMMD3-205ENST00000463688 VGLL2Q8N8G2 317 aa16.67■□□□□ 0.26
COMMD3-205ENST00000463688 TMOD2Q9NZR1 351 aa16.67■□□□□ 0.26
COMMD3-205ENST00000463688 TTLL12Q14166 644 aaPredicted RBP16.66■□□□□ 0.26
COMMD3-205ENST00000463688 ATP2B3Q16720 1220 aa16.66■□□□□ 0.26
COMMD3-205ENST00000463688 CFAP100Q494V2 611 aa16.66■□□□□ 0.26
COMMD3-205ENST00000463688 TTF2Q9UNY4 1162 aaKnown RBP16.66■□□□□ 0.26
COMMD3-205ENST00000463688 SPDYE2BA6NHP3 402 aa16.65■□□□□ 0.26
COMMD3-205ENST00000463688 SNAP23O00161 211 aa16.65■□□□□ 0.26
COMMD3-205ENST00000463688 SPDYE6P0CI01 402 aa16.65■□□□□ 0.26
COMMD3-205ENST00000463688 RFX5P48382 616 aaPredicted RBP16.65■□□□□ 0.26
COMMD3-205ENST00000463688 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.26
COMMD3-205ENST00000463688 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
COMMD3-205ENST00000463688 SLF2Q8IX21 1173 aa16.65■□□□□ 0.26
COMMD3-205ENST00000463688 DZIP1LQ8IYY4 767 aaKnown RBP16.65■□□□□ 0.26
COMMD3-205ENST00000463688 TEKT1Q969V4 418 aa16.65■□□□□ 0.26
COMMD3-205ENST00000463688 MEIS3Q99687 375 aa16.65■□□□□ 0.26
COMMD3-205ENST00000463688 DEFB129Q9H1M3 183 aa16.65■□□□□ 0.26
COMMD3-205ENST00000463688 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
COMMD3-205ENST00000463688 BCAR3O75815 825 aa16.64■□□□□ 0.25
COMMD3-205ENST00000463688 FGFR2P21802 821 aa16.64■□□□□ 0.25
COMMD3-205ENST00000463688 ZBED3Q96IU2 234 aaPredicted RBP16.64■□□□□ 0.25
COMMD3-205ENST00000463688 MXD3Q9BW11 206 aa16.64■□□□□ 0.25
COMMD3-205ENST00000463688 F8W031 263 aaPredicted RBP16.63■□□□□ 0.25
COMMD3-205ENST00000463688 MVPQ14764 893 aaKnown RBP16.63■□□□□ 0.25
COMMD3-205ENST00000463688 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.63■□□□□ 0.25
COMMD3-205ENST00000463688 SAGE1Q9NXZ1 904 aa16.63■□□□□ 0.25
COMMD3-205ENST00000463688 IGSF3O75054 1194 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 FMR1Q06787 632 aaKnown RBP eCLIP16.62■□□□□ 0.25
COMMD3-205ENST00000463688 CHAF1AQ13111 956 aaPredicted RBP16.62■□□□□ 0.25
COMMD3-205ENST00000463688 FKBP1CQ5VVH2 108 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 SPTY2D1Q68D10 685 aaPredicted RBP16.62■□□□□ 0.25
COMMD3-205ENST00000463688 TNS4Q8IZW8 715 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 CERS5Q8N5B7 392 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 SIL1Q9H173 461 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 SCN9AQ15858 1988 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 TRPM7Q96QT4 1865 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 BCAMP50895 628 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 INHBEP58166 350 aa16.62■□□□□ 0.25
COMMD3-205ENST00000463688 GORABQ5T7V8 394 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 404.5 ms