RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PRR14Q9BWN1 585 aa6.15□□□□□ -1.42
GTF3C3-208ENST00000455546 UBN2Q6ZU65 1347 aa6.15□□□□□ -1.43
GTF3C3-208ENST00000455546 ZNF541Q9H0D2 1346 aa6.15□□□□□ -1.43
GTF3C3-208ENST00000455546 LTBP3Q9NS15 1303 aa6.15□□□□□ -1.43
GTF3C3-208ENST00000455546 ZC3H4Q9UPT8 1303 aaKnown RBP6.15□□□□□ -1.43
GTF3C3-208ENST00000455546 LAMB4A4D0S4 1761 aa6.15□□□□□ -1.43
GTF3C3-208ENST00000455546 ABCC12Q96J65 1359 aa6.15□□□□□ -1.43
GTF3C3-208ENST00000455546 TLL1O43897 1013 aa6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 IARSP41252 1262 aaKnown RBP6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 FKBP4Q02790 459 aaKnown RBP eCLIP6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 Q3C1V9 767 aa6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 CRY2Q49AN0 593 aa6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 EAPPQ56P03 285 aaPredicted RBP6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 SOGA3Q5TF21 947 aa6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 COPS6Q7L5N1 327 aa6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 LRP10Q7Z4F1 713 aa6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 SCUBE3Q8IX30 993 aa6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 RTKN2Q8IZC4 609 aa6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 JMYQ8N9B5 988 aa6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 RPGRQ92834 1020 aaKnown RBP6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 NYXQ9GZU5 481 aa6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 MKRN1Q9UHC7 482 aaKnown RBP6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 ADAMTS8Q9UP79 889 aa6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 POLR2AP24928 1970 aaKnown RBP6.14□□□□□ -1.43
GTF3C3-208ENST00000455546 SCN4AP35499 1836 aa6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 FZD9O00144 591 aa6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 CHL1O00533 1208 aa6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 NTSR2O95665 410 aa6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 HCLS1P14317 486 aaPredicted RBP6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 CCDC82Q8N4S0 544 aa6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 XAGE3Q8WTP9 111 aa6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 RBM17Q96I25 401 aaKnown RBP6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 UTP14AQ9BVJ6 771 aaKnown RBP6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 TRIM34Q9BYJ4 488 aa6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 TAF1DQ9H5J8 278 aaPredicted RBP6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 PRDM9Q9NQV7 894 aa6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 GJA3Q9Y6H8 435 aa6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 RNF123Q5XPI4 1314 aa6.13□□□□□ -1.43
GTF3C3-208ENST00000455546 POM121CA8CG34 1229 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 ELL2O00472 640 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 NR1I2O75469 434 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 FMNL1O95466 1100 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 ITGBL1O95965 494 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 HOXA10P31260 410 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 EPHX2P34913 555 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 EPS15P42566 896 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 FMR1Q06787 632 aaKnown RBP eCLIP6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 NR6A1Q15406 480 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 SLC10A5Q5PT55 438 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 MAP1SQ66K74 1059 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 BRICD5Q6PL45 260 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 PPP1R42Q7Z4L9 355 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 JDP2Q8WYK2 163 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 RUNDC1Q96C34 613 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 NLRP3Q96P20 1036 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 CRAMP1Q96RY5 1269 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 USB1Q9BQ65 265 aaKnown RBP6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 MYBBP1AQ9BQG0 1328 aaKnown RBP6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 CHPF2Q9P2E5 772 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 HACL1Q9UJ83 578 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 NDUFB9Q9Y6M9 179 aa6.12□□□□□ -1.43
GTF3C3-208ENST00000455546 LAMB2P55268 1798 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 COL4A5P29400 1685 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 IQCA1LA6NCM1 817 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 ATP5J2-PTCD1G3V325 749 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 APAF1O14727 1248 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 PPEF1O14829 653 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 GPR37L1O60883 481 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 HSPA1AP0DMV8 641 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 HSPA1BP0DMV9 641 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 EIF6P56537 245 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 LMOD3Q0VAK6 560 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 TCIRG1Q13488 830 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 WDR43Q15061 677 aaKnown RBP eCLIP6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 AOC3Q16853 763 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 PARP10Q53GL7 1025 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 DUSP27Q5VZP5 1158 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 NLRP10Q86W26 655 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 LDHDQ86WU2 507 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 CNTROBQ8N137 903 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 LARGE2Q8N3Y3 721 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 THAP11Q96EK4 314 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 PSMD1Q99460 953 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 DDX21Q9NR30 783 aaKnown RBP eCLIP6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 BABAM1Q9NWV8 329 aa6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 TRMT112Q9UI30 125 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-208ENST00000455546 ERBB4Q15303 1308 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 PASKQ96RG2 1323 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 PPIP5K2O43314 1243 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 IRF5Q13568 498 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 CCDC184Q52MB2 194 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 HDGFL1Q5TGJ6 251 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 CC2D2BQ6DHV5 1058 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 GPC2Q8N158 579 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 JARID2Q92833 1246 aaPredicted RBP6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 FAM89AQ96GI7 184 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 PRKRIP1Q9H875 184 aaPredicted RBP6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 PRM3Q9NNZ6 103 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 MBIPQ9NS73 344 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 MAP10Q9P2G4 905 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms