RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 NBPF12Q5TAG4 269 aaPredicted RBP22.15■■□□□ 1.14
UBE2D4-209ENST00000454428 TSPYL6Q8N831 410 aa22.15■■□□□ 1.14
UBE2D4-209ENST00000454428 EFCC1Q9HA90 598 aa22.15■■□□□ 1.14
UBE2D4-209ENST00000454428 CD209Q9NNX6 404 aa22.15■■□□□ 1.14
UBE2D4-209ENST00000454428 TESPA1A2RU30 521 aaPredicted RBP22.14■■□□□ 1.13
UBE2D4-209ENST00000454428 UNCXA6NJT0 531 aa22.14■■□□□ 1.13
UBE2D4-209ENST00000454428 H7C1W4 665 aa22.14■■□□□ 1.13
UBE2D4-209ENST00000454428 SNAP23O00161 211 aa22.14■■□□□ 1.13
UBE2D4-209ENST00000454428 PPP1R12BO60237 982 aaPredicted RBP22.14■■□□□ 1.13
UBE2D4-209ENST00000454428 USP2O75604 605 aaPredicted RBP22.14■■□□□ 1.13
UBE2D4-209ENST00000454428 GNAI1P63096 354 aa22.14■■□□□ 1.13
UBE2D4-209ENST00000454428 PPP2R3BQ9Y5P8 575 aa22.14■■□□□ 1.13
UBE2D4-209ENST00000454428 CLRN2A0PK11 232 aa22.13■■□□□ 1.13
UBE2D4-209ENST00000454428 ITGA6P23229 1130 aa22.13■■□□□ 1.13
UBE2D4-209ENST00000454428 IGHMBP2P38935 993 aaKnown RBP22.13■■□□□ 1.13
UBE2D4-209ENST00000454428 CCDC30Q5VVM6 783 aa22.13■■□□□ 1.13
UBE2D4-209ENST00000454428 ZNF333Q96JL9 665 aa22.13■■□□□ 1.13
UBE2D4-209ENST00000454428 PRMT6Q96LA8 375 aaPredicted RBP22.13■■□□□ 1.13
UBE2D4-209ENST00000454428 ANKRD2Q9GZV1 360 aa22.13■■□□□ 1.13
UBE2D4-209ENST00000454428 COLQQ9Y215 455 aaPredicted RBP22.13■■□□□ 1.13
UBE2D4-209ENST00000454428 SPDYE2BA6NHP3 402 aa22.12■■□□□ 1.13
UBE2D4-209ENST00000454428 SPDYE6P0CI01 402 aa22.12■■□□□ 1.13
UBE2D4-209ENST00000454428 CASP7P55210 303 aa22.12■■□□□ 1.13
UBE2D4-209ENST00000454428 SP3Q02447 781 aa22.12■■□□□ 1.13
UBE2D4-209ENST00000454428 UBE3BQ7Z3V4 1068 aa22.12■■□□□ 1.13
UBE2D4-209ENST00000454428 PLA2G12BQ9BX93 195 aa22.12■■□□□ 1.13
UBE2D4-209ENST00000454428 TRIOBPQ9H2D6 2365 aa22.12■■□□□ 1.13
UBE2D4-209ENST00000454428 CSF1RP07333 972 aa22.11■■□□□ 1.13
UBE2D4-209ENST00000454428 CHRNDQ07001 517 aa22.11■■□□□ 1.13
UBE2D4-209ENST00000454428 CFAP100Q494V2 611 aa22.11■■□□□ 1.13
UBE2D4-209ENST00000454428 F8W031 263 aaPredicted RBP22.1■■□□□ 1.13
UBE2D4-209ENST00000454428 APAF1O14727 1248 aa22.1■■□□□ 1.13
UBE2D4-209ENST00000454428 SUPT20HL1Q3ZLR7 823 aa22.1■■□□□ 1.13
UBE2D4-209ENST00000454428 MS4A4AQ96JQ5 239 aa22.1■■□□□ 1.13
UBE2D4-209ENST00000454428 C15orf52Q6ZUT6 534 aaKnown RBP22.09■■□□□ 1.13
UBE2D4-209ENST00000454428 G2E3Q7L622 706 aa22.09■■□□□ 1.13
UBE2D4-209ENST00000454428 ZSWIM8A7E2V4 1837 aa22.08■■□□□ 1.13
UBE2D4-209ENST00000454428 IL1R1P14778 569 aa22.08■■□□□ 1.13
UBE2D4-209ENST00000454428 IREB2P48200 963 aaKnown RBP22.08■■□□□ 1.13
UBE2D4-209ENST00000454428 NEXNQ0ZGT2 675 aa22.08■■□□□ 1.13
UBE2D4-209ENST00000454428 RASA3Q14644 834 aa22.08■■□□□ 1.13
UBE2D4-209ENST00000454428 OTUD7BQ6GQQ9 843 aa22.08■■□□□ 1.13
UBE2D4-209ENST00000454428 ANKRD13AQ8IZ07 590 aa22.08■■□□□ 1.13
UBE2D4-209ENST00000454428 MPHOSPH8Q99549 860 aa22.08■■□□□ 1.13
UBE2D4-209ENST00000454428 VEZTQ9HBM0 779 aa22.08■■□□□ 1.13
UBE2D4-209ENST00000454428 PTCH2Q9Y6C5 1203 aa22.08■■□□□ 1.13
UBE2D4-209ENST00000454428 TAF5LO75529 589 aa22.07■■□□□ 1.12
UBE2D4-209ENST00000454428 GCKRQ14397 625 aa22.07■■□□□ 1.12
UBE2D4-209ENST00000454428 CDAN1Q8IWY9 1227 aa22.07■■□□□ 1.12
UBE2D4-209ENST00000454428 CNKSR2Q8WXI2 1034 aa22.07■■□□□ 1.12
UBE2D4-209ENST00000454428 OPTNQ96CV9 577 aa22.07■■□□□ 1.12
UBE2D4-209ENST00000454428 KCNJ4P48050 445 aa22.06■■□□□ 1.12
UBE2D4-209ENST00000454428 HELBQ8NG08 1087 aaPredicted RBP22.06■■□□□ 1.12
UBE2D4-209ENST00000454428 BRI3BPQ8WY22 251 aa22.06■■□□□ 1.12
UBE2D4-209ENST00000454428 TMEM106CQ9BVX2 250 aa22.06■■□□□ 1.12
UBE2D4-209ENST00000454428 ELP3Q9H9T3 547 aa22.06■■□□□ 1.12
UBE2D4-209ENST00000454428 JAG2Q9Y219 1238 aa22.06■■□□□ 1.12
UBE2D4-209ENST00000454428 MYO1BO43795 1136 aa22.05■■□□□ 1.12
UBE2D4-209ENST00000454428 FKBP1AP62942 108 aaKnown RBP22.05■■□□□ 1.12
UBE2D4-209ENST00000454428 CALD1Q05682 793 aaKnown RBP22.05■■□□□ 1.12
UBE2D4-209ENST00000454428 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.05■■□□□ 1.12
UBE2D4-209ENST00000454428 OTUD5Q96G74 571 aa22.05■■□□□ 1.12
UBE2D4-209ENST00000454428 TEPSINQ96N21 525 aa22.04■■□□□ 1.12
UBE2D4-209ENST00000454428 LAMA3Q16787 3333 aa22.03■■□□□ 1.12
UBE2D4-209ENST00000454428 H0YGN5 161 aa22.03■■□□□ 1.12
UBE2D4-209ENST00000454428 SLC9C1Q4G0N8 1177 aa22.03■■□□□ 1.12
UBE2D4-209ENST00000454428 FAM43AQ8N2R8 423 aa22.03■■□□□ 1.12
UBE2D4-209ENST00000454428 ARAP2Q8WZ64 1704 aa22.03■■□□□ 1.12
UBE2D4-209ENST00000454428 COL6A3P12111 3177 aa22.02■■□□□ 1.12
UBE2D4-209ENST00000454428 SPDYE2Q495Y8 402 aa22.02■■□□□ 1.12
UBE2D4-209ENST00000454428 TSR2Q969E8 191 aaKnown RBP22.02■■□□□ 1.12
UBE2D4-209ENST00000454428 CHMP4AQ9BY43 222 aa22.02■■□□□ 1.12
UBE2D4-209ENST00000454428 ZNF804AQ7Z570 1209 aa22.01■■□□□ 1.11
UBE2D4-209ENST00000454428 ZNF70Q9UC06 446 aaPredicted RBP22.01■■□□□ 1.11
UBE2D4-209ENST00000454428 CCL15-CCL14A0A0B4J2E2 113 aa22■■□□□ 1.11
UBE2D4-209ENST00000454428 ANKRD18BA2A2Z9 1011 aa22■■□□□ 1.11
UBE2D4-209ENST00000454428 RBM5P52756 815 aaKnown RBP eCLIP22■■□□□ 1.11
UBE2D4-209ENST00000454428 FOXO4P98177 505 aa22■■□□□ 1.11
UBE2D4-209ENST00000454428 DDX10Q13206 875 aaKnown RBP22■■□□□ 1.11
UBE2D4-209ENST00000454428 VGLL4Q14135 290 aa22■■□□□ 1.11
UBE2D4-209ENST00000454428 TAF1CQ15572 869 aaPredicted RBP22■■□□□ 1.11
UBE2D4-209ENST00000454428 CCL15Q16663 113 aa22■■□□□ 1.11
UBE2D4-209ENST00000454428 NBPF11Q86T75 865 aa22■■□□□ 1.11
UBE2D4-209ENST00000454428 STK31Q9BXU1 1019 aa22■■□□□ 1.11
UBE2D4-209ENST00000454428 ARHGAP39Q9C0H5 1083 aa22■■□□□ 1.11
UBE2D4-209ENST00000454428 ZFYVE28Q9HCC9 887 aa22■■□□□ 1.11
UBE2D4-209ENST00000454428 MYCP01106 439 aaPredicted RBP21.99■■□□□ 1.11
UBE2D4-209ENST00000454428 SLC4A2P04920 1241 aa21.99■■□□□ 1.11
UBE2D4-209ENST00000454428 SLC4A8Q2Y0W8 1093 aa21.99■■□□□ 1.11
UBE2D4-209ENST00000454428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.99■■□□□ 1.11
UBE2D4-209ENST00000454428 SH3TC2Q8TF17 1288 aa21.99■■□□□ 1.11
UBE2D4-209ENST00000454428 TDRD3Q9H7E2 651 aaKnown RBP21.99■■□□□ 1.11
UBE2D4-209ENST00000454428 FAM205AQ6ZU69 1335 aa21.99■■□□□ 1.11
UBE2D4-209ENST00000454428 TMEM39BQ9GZU3 492 aa21.98■■□□□ 1.11
UBE2D4-209ENST00000454428 GTF2A2P52657 109 aa21.97■■□□□ 1.11
UBE2D4-209ENST00000454428 FLIIQ13045 1269 aa21.97■■□□□ 1.11
UBE2D4-209ENST00000454428 TNFAIP1Q13829 316 aa21.97■■□□□ 1.11
UBE2D4-209ENST00000454428 SHISA4Q96DD7 197 aa21.97■■□□□ 1.11
UBE2D4-209ENST00000454428 A0A0C4DFX4 3053 aa21.96■■□□□ 1.11
UBE2D4-209ENST00000454428 MAP3K9P80192 1104 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 232.9 ms