RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 LRRFIP2Q9Y608 721 aaKnown RBP25.52■■□□□ 1.68
UBE2D4-207ENST00000450743 EYA2O00167 538 aa25.51■■□□□ 1.67
UBE2D4-207ENST00000450743 PTPN12Q05209 780 aaKnown RBP25.51■■□□□ 1.67
UBE2D4-207ENST00000450743 ATF7IPQ6VMQ6 1270 aa25.51■■□□□ 1.67
UBE2D4-207ENST00000450743 FRAT1Q92837 279 aaPredicted RBP25.51■■□□□ 1.67
UBE2D4-207ENST00000450743 CDCA5Q96FF9 252 aa25.51■■□□□ 1.67
UBE2D4-207ENST00000450743 JAG2Q9Y219 1238 aa25.51■■□□□ 1.67
UBE2D4-207ENST00000450743 ZBED9Q6R2W3 1325 aa25.51■■□□□ 1.67
UBE2D4-207ENST00000450743 FAM205AQ6ZU69 1335 aa25.51■■□□□ 1.67
UBE2D4-207ENST00000450743 ARAP2Q8WZ64 1704 aa25.51■■□□□ 1.67
UBE2D4-207ENST00000450743 MYH13Q9UKX3 1938 aa25.51■■□□□ 1.67
UBE2D4-207ENST00000450743 C2orf69Q8N8R5 385 aa25.5■■□□□ 1.67
UBE2D4-207ENST00000450743 ZBED3Q96IU2 234 aaPredicted RBP25.5■■□□□ 1.67
UBE2D4-207ENST00000450743 WBP1LQ9NX94 342 aa25.5■■□□□ 1.67
UBE2D4-207ENST00000450743 HUNKP57058 714 aa25.49■■□□□ 1.67
UBE2D4-207ENST00000450743 FBXO33Q7Z6M2 555 aa25.49■■□□□ 1.67
UBE2D4-207ENST00000450743 SCAF8Q9UPN6 1271 aaKnown RBP25.49■■□□□ 1.67
UBE2D4-207ENST00000450743 TNNQ9UQP3 1299 aa25.49■■□□□ 1.67
UBE2D4-207ENST00000450743 FOXN1O15353 648 aa25.48■■□□□ 1.67
UBE2D4-207ENST00000450743 GNAI3P08754 354 aa25.48■■□□□ 1.67
UBE2D4-207ENST00000450743 MAP2K1Q02750 393 aaPredicted RBP25.48■■□□□ 1.67
UBE2D4-207ENST00000450743 COL13A1Q5TAT6 717 aaPredicted RBP25.48■■□□□ 1.67
UBE2D4-207ENST00000450743 ATG9AQ7Z3C6 839 aa25.48■■□□□ 1.67
UBE2D4-207ENST00000450743 F8W031 263 aaPredicted RBP25.47■■□□□ 1.67
UBE2D4-207ENST00000450743 VPS37DQ86XT2 251 aa25.47■■□□□ 1.67
UBE2D4-207ENST00000450743 MTMR14Q8NCE2 650 aa25.47■■□□□ 1.67
UBE2D4-207ENST00000450743 AIDAQ96BJ3 306 aa25.47■■□□□ 1.67
UBE2D4-207ENST00000450743 FBXO3Q9UK99 471 aa25.47■■□□□ 1.67
UBE2D4-207ENST00000450743 AOC2O75106 756 aa25.46■■□□□ 1.67
UBE2D4-207ENST00000450743 FGFR2P21802 821 aa25.46■■□□□ 1.67
UBE2D4-207ENST00000450743 MAP2K2P36507 400 aa25.46■■□□□ 1.67
UBE2D4-207ENST00000450743 PUM3Q15397 648 aaKnown RBP25.46■■□□□ 1.67
UBE2D4-207ENST00000450743 DLGAP5Q15398 846 aa25.46■■□□□ 1.67
UBE2D4-207ENST00000450743 CAVIN4Q5BKX8 364 aa25.46■■□□□ 1.67
UBE2D4-207ENST00000450743 CLUAP1Q96AJ1 413 aa25.46■■□□□ 1.67
UBE2D4-207ENST00000450743 CIAO1O76071 339 aa25.45■■□□□ 1.66
UBE2D4-207ENST00000450743 MFSD14BQ5SR56 506 aa25.45■■□□□ 1.66
UBE2D4-207ENST00000450743 ZKSCAN2Q63HK3 967 aa25.45■■□□□ 1.66
UBE2D4-207ENST00000450743 SIL1Q9H173 461 aa25.45■■□□□ 1.66
UBE2D4-207ENST00000450743 IQSEC3Q9UPP2 1182 aaPredicted RBP25.45■■□□□ 1.66
UBE2D4-207ENST00000450743 PAPPA2Q9BXP8 1791 aa25.45■■□□□ 1.66
UBE2D4-207ENST00000450743 IFIT1P09914 478 aaKnown RBP25.44■■□□□ 1.66
UBE2D4-207ENST00000450743 BCAMP50895 628 aa25.43■■□□□ 1.66
UBE2D4-207ENST00000450743 CFAP100Q494V2 611 aa25.43■■□□□ 1.66
UBE2D4-207ENST00000450743 PRAMEF18Q5VWM3 479 aa25.43■■□□□ 1.66
UBE2D4-207ENST00000450743 RGMBQ6NW40 437 aa25.43■■□□□ 1.66
UBE2D4-207ENST00000450743 APOBEC3FQ8IUX4 373 aaKnown RBP25.43■■□□□ 1.66
UBE2D4-207ENST00000450743 COPRSQ9NQ92 184 aa25.43■■□□□ 1.66
UBE2D4-207ENST00000450743 PCDHAC2Q9Y5I4 1007 aa25.43■■□□□ 1.66
UBE2D4-207ENST00000450743 CTCFP49711 727 aaPredicted RBP25.42■■□□□ 1.66
UBE2D4-207ENST00000450743 LPIN2Q92539 896 aa25.42■■□□□ 1.66
UBE2D4-207ENST00000450743 PA2G4Q9UQ80 394 aaKnown RBP25.42■■□□□ 1.66
UBE2D4-207ENST00000450743 SPDYE2BA6NHP3 402 aa25.41■■□□□ 1.66
UBE2D4-207ENST00000450743 FRAT2O75474 233 aaPredicted RBP25.41■■□□□ 1.66
UBE2D4-207ENST00000450743 SPDYE6P0CI01 402 aa25.41■■□□□ 1.66
UBE2D4-207ENST00000450743 SLC5A1P13866 664 aa25.41■■□□□ 1.66
UBE2D4-207ENST00000450743 FKBP1BP68106 108 aa25.41■■□□□ 1.66
UBE2D4-207ENST00000450743 IFFO2Q5TF58 517 aa25.41■■□□□ 1.66
UBE2D4-207ENST00000450743 TMEM57Q8N5G2 664 aa25.41■■□□□ 1.66
UBE2D4-207ENST00000450743 PRMT6Q96LA8 375 aaPredicted RBP25.41■■□□□ 1.66
UBE2D4-207ENST00000450743 CEP126Q9P2H0 1117 aa25.41■■□□□ 1.66
UBE2D4-207ENST00000450743 TTF2Q9UNY4 1162 aaKnown RBP25.41■■□□□ 1.66
UBE2D4-207ENST00000450743 IL15P40933 162 aaPredicted RBP25.4■■□□□ 1.66
UBE2D4-207ENST00000450743 CHAF1AQ13111 956 aaPredicted RBP25.4■■□□□ 1.66
UBE2D4-207ENST00000450743 NOGQ13253 232 aa25.4■■□□□ 1.66
UBE2D4-207ENST00000450743 MTX1Q13505 466 aa25.4■■□□□ 1.66
UBE2D4-207ENST00000450743 SRGAP3O43295 1099 aa25.39■■□□□ 1.66
UBE2D4-207ENST00000450743 RBM5P52756 815 aaKnown RBP eCLIP25.39■■□□□ 1.66
UBE2D4-207ENST00000450743 TBC1D22AQ8WUA7 517 aa25.39■■□□□ 1.66
UBE2D4-207ENST00000450743 CCDC102AQ96A19 550 aa25.39■■□□□ 1.66
UBE2D4-207ENST00000450743 BEGAINQ9BUH8 593 aa25.39■■□□□ 1.66
UBE2D4-207ENST00000450743 AKAP11Q9UKA4 1901 aa25.39■■□□□ 1.65
UBE2D4-207ENST00000450743 FAM155AB1AL88 458 aaPredicted RBP25.38■■□□□ 1.65
UBE2D4-207ENST00000450743 MYO1BO43795 1136 aa25.38■■□□□ 1.65
UBE2D4-207ENST00000450743 GNAI2P04899 355 aa25.38■■□□□ 1.65
UBE2D4-207ENST00000450743 ZNF157P51786 506 aaPredicted RBP25.38■■□□□ 1.65
UBE2D4-207ENST00000450743 ATP2B3Q16720 1220 aa25.38■■□□□ 1.65
UBE2D4-207ENST00000450743 ZIC5Q96T25 663 aa25.38■■□□□ 1.65
UBE2D4-207ENST00000450743 PRDM10Q9NQV6 1147 aa25.38■■□□□ 1.65
UBE2D4-207ENST00000450743 SERPINA10Q9UK55 444 aa25.38■■□□□ 1.65
UBE2D4-207ENST00000450743 COL1A1P02452 1464 aaPredicted RBP25.37■■□□□ 1.65
UBE2D4-207ENST00000450743 NF2P35240 595 aa25.37■■□□□ 1.65
UBE2D4-207ENST00000450743 GRIK5Q16478 980 aa25.37■■□□□ 1.65
UBE2D4-207ENST00000450743 MOB2Q70IA6 237 aa25.37■■□□□ 1.65
UBE2D4-207ENST00000450743 AOX1Q06278 1338 aa25.37■■□□□ 1.65
UBE2D4-207ENST00000450743 CLRN2A0PK11 232 aa25.36■■□□□ 1.65
UBE2D4-207ENST00000450743 HSPA8P11142 646 aaKnown RBP25.36■■□□□ 1.65
UBE2D4-207ENST00000450743 LBX1P52954 281 aa25.36■■□□□ 1.65
UBE2D4-207ENST00000450743 DEFB129Q9H1M3 183 aa25.36■■□□□ 1.65
UBE2D4-207ENST00000450743 UBE2Q2LH0YL09 131 aa25.34■■□□□ 1.65
UBE2D4-207ENST00000450743 SLC10A3P09131 477 aa25.34■■□□□ 1.65
UBE2D4-207ENST00000450743 TTLL12Q14166 644 aaPredicted RBP25.34■■□□□ 1.65
UBE2D4-207ENST00000450743 FTSJ3Q8IY81 847 aaKnown RBP25.34■■□□□ 1.65
UBE2D4-207ENST00000450743 DZIP1LQ8IYY4 767 aaKnown RBP25.34■■□□□ 1.65
UBE2D4-207ENST00000450743 TNS4Q8IZW8 715 aa25.34■■□□□ 1.65
UBE2D4-207ENST00000450743 VEZTQ9HBM0 779 aa25.34■■□□□ 1.65
UBE2D4-207ENST00000450743 CRKP46108 304 aa25.33■■□□□ 1.65
UBE2D4-207ENST00000450743 HDLBPQ00341 1268 aaKnown RBP25.33■■□□□ 1.65
UBE2D4-207ENST00000450743 PPP2R3BQ9Y5P8 575 aa25.33■■□□□ 1.65
UBE2D4-207ENST00000450743 RLBP1P12271 317 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms