RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 MED23Q9ULK4 1368 aa11.59□□□□□ -0.55
RFC4-210ENST00000449502 KLRK1P26718 216 aa11.59□□□□□ -0.55
RFC4-210ENST00000449502 PSMA5P28066 241 aa11.59□□□□□ -0.55
RFC4-210ENST00000449502 CHRNA5P30532 468 aa11.59□□□□□ -0.55
RFC4-210ENST00000449502 PTH1RQ03431 593 aa11.59□□□□□ -0.55
RFC4-210ENST00000449502 CCDC129Q6ZRS4 1044 aa11.59□□□□□ -0.55
RFC4-210ENST00000449502 ZNF589Q86UQ0 364 aaPredicted RBP11.59□□□□□ -0.55
RFC4-210ENST00000449502 MAP4K1Q92918 833 aa11.59□□□□□ -0.55
RFC4-210ENST00000449502 SEC62Q99442 399 aaKnown RBP11.59□□□□□ -0.55
RFC4-210ENST00000449502 PDGFDQ9GZP0 370 aaPredicted RBP11.59□□□□□ -0.55
RFC4-210ENST00000449502 IL25Q9H293 177 aa11.59□□□□□ -0.55
RFC4-210ENST00000449502 MAST3O60307 1309 aa11.59□□□□□ -0.55
RFC4-210ENST00000449502 M0R2C6 588 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 IGSF3O75054 1194 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 APPP05067 770 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 HSP90AA1P07900 732 aaKnown RBP11.58□□□□□ -0.56
RFC4-210ENST00000449502 CYP7A1P22680 504 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 KRT32Q14532 448 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 GRIPAP1Q4V328 841 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 DZIP1Q86YF9 867 aaKnown RBP11.58□□□□□ -0.56
RFC4-210ENST00000449502 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 SUPT20HQ8NEM7 779 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 OSBP2Q969R2 916 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 SNX21Q969T3 373 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 DSCC1Q9BVC3 393 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 ZNF219Q9P2Y4 722 aaPredicted RBP11.58□□□□□ -0.56
RFC4-210ENST00000449502 PPP1R1BQ9UD71 204 aaPredicted RBP11.58□□□□□ -0.56
RFC4-210ENST00000449502 WWC3Q9ULE0 1092 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 MYH3P11055 1940 aa11.58□□□□□ -0.56
RFC4-210ENST00000449502 TNRC6CQ9HCJ0 1690 aaKnown RBP11.57□□□□□ -0.56
RFC4-210ENST00000449502 WTIPA6NIX2 430 aaPredicted RBP11.57□□□□□ -0.56
RFC4-210ENST00000449502 RIMBP2O15034 1052 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 GPAA1O43292 621 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 CHGBP05060 677 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 GNAT2P19087 354 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 MCM2P49736 904 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 GSTO1P78417 241 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 SLFNL1Q499Z3 407 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 CREB3L3Q68CJ9 461 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 NAA16Q6N069 864 aaPredicted RBP11.57□□□□□ -0.56
RFC4-210ENST00000449502 TMED8Q6PL24 325 aaPredicted RBP11.57□□□□□ -0.56
RFC4-210ENST00000449502 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 TDRD7Q8NHU6 1098 aaKnown RBP11.57□□□□□ -0.56
RFC4-210ENST00000449502 GPR101Q96P66 508 aaPredicted RBP11.57□□□□□ -0.56
RFC4-210ENST00000449502 NOL10Q9BSC4 688 aaKnown RBP11.57□□□□□ -0.56
RFC4-210ENST00000449502 COA1Q9GZY4 146 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 CD209Q9NNX6 404 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 POLLQ9UGP5 575 aa11.57□□□□□ -0.56
RFC4-210ENST00000449502 SLC27A2O14975 620 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 ZBTB22O15209 634 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 LDHBP07195 334 aaKnown RBP11.56□□□□□ -0.56
RFC4-210ENST00000449502 SLC4A3P48751 1232 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 NEK4P51957 841 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 TGFB2P61812 414 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 IMMTQ16891 758 aaKnown RBP11.56□□□□□ -0.56
RFC4-210ENST00000449502 TXNRD3Q86VQ6 643 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 TBC1D22AQ8WUA7 517 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 JAKMIP1Q96N16 626 aaKnown RBP11.56□□□□□ -0.56
RFC4-210ENST00000449502 KIF2CQ99661 725 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 TBC1D2Q9BYX2 928 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 NACAP1Q9BZK3 213 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 PUS7LQ9H0K6 701 aaKnown RBP11.56□□□□□ -0.56
RFC4-210ENST00000449502 SNX14Q9Y5W7 946 aa11.56□□□□□ -0.56
RFC4-210ENST00000449502 C10orf71Q711Q0 1435 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 MAGEB6P1A0A0J9YX57 407 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 MBD4O95243 580 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 LDHCP07864 332 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 HSPD1P10809 573 aaKnown RBP11.55□□□□□ -0.56
RFC4-210ENST00000449502 IL1R1P14778 569 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 DPEP1P16444 411 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 NECTIN1Q15223 517 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 CCDC93Q567U6 631 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 SOGA3Q5TF21 947 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 SLF2Q8IX21 1173 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 PALD1Q9ULE6 856 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 JAG2Q9Y219 1238 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 CYP46A1Q9Y6A2 500 aa11.55□□□□□ -0.56
RFC4-210ENST00000449502 A0A0G2JLW4 131 aa11.54□□□□□ -0.56
RFC4-210ENST00000449502 TCRBV5S4A2TA0A5A2 114 aa11.54□□□□□ -0.56
RFC4-210ENST00000449502 PSDA5PKW4 1024 aaPredicted RBP11.54□□□□□ -0.56
RFC4-210ENST00000449502 K7ELQ4 463 aaPredicted RBP11.54□□□□□ -0.56
RFC4-210ENST00000449502 C21orf2O43822 256 aa11.54□□□□□ -0.56
RFC4-210ENST00000449502 MIGA1Q8NAN2 632 aa11.54□□□□□ -0.56
RFC4-210ENST00000449502 PIM2Q9P1W9 311 aa11.54□□□□□ -0.56
RFC4-210ENST00000449502 SLC4A4Q9Y6R1 1079 aa11.54□□□□□ -0.56
RFC4-210ENST00000449502 SALL1Q9NSC2 1324 aa11.54□□□□□ -0.56
RFC4-210ENST00000449502 IRS2Q9Y4H2 1338 aa11.54□□□□□ -0.56
RFC4-210ENST00000449502 COL4A1P02462 1669 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 PATL2C9JE40 543 aaKnown RBP11.53□□□□□ -0.56
RFC4-210ENST00000449502 ZNF213O14771 459 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 BAG3O95817 575 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 HMGB1P09429 215 aaKnown RBP11.53□□□□□ -0.56
RFC4-210ENST00000449502 CASTP20810 708 aaKnown RBP11.53□□□□□ -0.56
RFC4-210ENST00000449502 FGD1P98174 961 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 DOK7Q18PE1 504 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 VPS53Q5VIR6 699 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 BLOC1S2Q6QNY1 142 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 OLFM4Q6UX06 510 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms