RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 FBXW7Q969H0 707 aa17.58■□□□□ 0.4
RTFDC1-204ENST00000449062 GGA3Q9NZ52 723 aa17.58■□□□□ 0.4
RTFDC1-204ENST00000449062 PA2G4Q9UQ80 394 aaKnown RBP17.58■□□□□ 0.4
RTFDC1-204ENST00000449062 ADM5C9JUS6 153 aa17.57■□□□□ 0.4
RTFDC1-204ENST00000449062 BCAMP50895 628 aa17.57■□□□□ 0.4
RTFDC1-204ENST00000449062 MTMR14Q8NCE2 650 aa17.57■□□□□ 0.4
RTFDC1-204ENST00000449062 PITPNM2Q9BZ72 1349 aa17.56■□□□□ 0.4
RTFDC1-204ENST00000449062 ZBTB7BO15156 539 aaPredicted RBP17.56■□□□□ 0.4
RTFDC1-204ENST00000449062 PUM3Q15397 648 aaKnown RBP17.56■□□□□ 0.4
RTFDC1-204ENST00000449062 JAG2Q9Y219 1238 aa17.56■□□□□ 0.4
RTFDC1-204ENST00000449062 GNAI2P04899 355 aa17.55■□□□□ 0.4
RTFDC1-204ENST00000449062 IL15P40933 162 aaPredicted RBP17.55■□□□□ 0.4
RTFDC1-204ENST00000449062 DZIP1LQ8IYY4 767 aaKnown RBP17.55■□□□□ 0.4
RTFDC1-204ENST00000449062 LPIN2Q92539 896 aa17.55■□□□□ 0.4
RTFDC1-204ENST00000449062 HHIPL1Q96JK4 782 aa17.55■□□□□ 0.4
RTFDC1-204ENST00000449062 SIL1Q9H173 461 aa17.55■□□□□ 0.4
RTFDC1-204ENST00000449062 ABT1Q9ULW3 272 aaKnown RBP17.55■□□□□ 0.4
RTFDC1-204ENST00000449062 SRGAP3O43295 1099 aa17.54■□□□□ 0.4
RTFDC1-204ENST00000449062 GRIK5Q16478 980 aa17.54■□□□□ 0.4
RTFDC1-204ENST00000449062 SULF1Q8IWU6 871 aa17.54■□□□□ 0.4
RTFDC1-204ENST00000449062 CEP126Q9P2H0 1117 aa17.54■□□□□ 0.4
RTFDC1-204ENST00000449062 PCDHAC2Q9Y5I4 1007 aa17.54■□□□□ 0.4
RTFDC1-204ENST00000449062 WDR33Q9C0J8 1336 aaKnown RBP17.53■□□□□ 0.4
RTFDC1-204ENST00000449062 TRPM7Q96QT4 1865 aa17.53■□□□□ 0.4
RTFDC1-204ENST00000449062 PNMA6EA0A0J9YXQ4 647 aa17.53■□□□□ 0.4
RTFDC1-204ENST00000449062 ZBTB22O15209 634 aa17.53■□□□□ 0.4
RTFDC1-204ENST00000449062 IFIT1P09914 478 aaKnown RBP17.53■□□□□ 0.4
RTFDC1-204ENST00000449062 CAVIN4Q5BKX8 364 aa17.53■□□□□ 0.4
RTFDC1-204ENST00000449062 CDCA5Q96FF9 252 aa17.53■□□□□ 0.4
RTFDC1-204ENST00000449062 HDAC9Q9UKV0 1011 aa17.53■□□□□ 0.4
RTFDC1-204ENST00000449062 SCAF8Q9UPN6 1271 aaKnown RBP17.53■□□□□ 0.4
RTFDC1-204ENST00000449062 IQSEC3Q9UPP2 1182 aaPredicted RBP17.53■□□□□ 0.4
RTFDC1-204ENST00000449062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
RTFDC1-204ENST00000449062 AOX1Q06278 1338 aa17.52■□□□□ 0.4
RTFDC1-204ENST00000449062 MFSD14BQ5SR56 506 aa17.52■□□□□ 0.4
RTFDC1-204ENST00000449062 CAPNS2Q96L46 248 aa17.52■□□□□ 0.4
RTFDC1-204ENST00000449062 PRMT6Q96LA8 375 aaPredicted RBP17.52■□□□□ 0.4
RTFDC1-204ENST00000449062 ZNF408Q9H9D4 720 aa17.52■□□□□ 0.4
RTFDC1-204ENST00000449062 SPDYE2BA6NHP3 402 aa17.51■□□□□ 0.39
RTFDC1-204ENST00000449062 F8W031 263 aaPredicted RBP17.51■□□□□ 0.39
RTFDC1-204ENST00000449062 SPDYE6P0CI01 402 aa17.51■□□□□ 0.39
RTFDC1-204ENST00000449062 ATP8B2P98198 1209 aa17.51■□□□□ 0.39
RTFDC1-204ENST00000449062 POLA2Q14181 598 aa17.51■□□□□ 0.39
RTFDC1-204ENST00000449062 DLGAP5Q15398 846 aa17.51■□□□□ 0.39
RTFDC1-204ENST00000449062 CFAP100Q494V2 611 aa17.51■□□□□ 0.39
RTFDC1-204ENST00000449062 CYP4F22Q6NT55 531 aa17.51■□□□□ 0.39
RTFDC1-204ENST00000449062 GBA2Q9HCG7 927 aaPredicted RBP17.51■□□□□ 0.39
RTFDC1-204ENST00000449062 WBP1LQ9NX94 342 aa17.51■□□□□ 0.39
RTFDC1-204ENST00000449062 HSPA1AP0DMV8 641 aaKnown RBP17.5■□□□□ 0.39
RTFDC1-204ENST00000449062 HSPA1BP0DMV9 641 aaKnown RBP17.5■□□□□ 0.39
RTFDC1-204ENST00000449062 SLC5A1P13866 664 aa17.5■□□□□ 0.39
RTFDC1-204ENST00000449062 ATP2B3Q16720 1220 aa17.5■□□□□ 0.39
RTFDC1-204ENST00000449062 PRAMEF18Q5VWM3 479 aa17.5■□□□□ 0.39
RTFDC1-204ENST00000449062 VPS37DQ86XT2 251 aa17.5■□□□□ 0.39
RTFDC1-204ENST00000449062 PANK1Q8TE04 598 aa17.5■□□□□ 0.39
RTFDC1-204ENST00000449062 SSH3Q8TE77 659 aa17.5■□□□□ 0.39
RTFDC1-204ENST00000449062 MRIQ9BWK5 157 aa17.5■□□□□ 0.39
RTFDC1-204ENST00000449062 HUNKP57058 714 aa17.49■□□□□ 0.39
RTFDC1-204ENST00000449062 TIMM10P62072 90 aa17.49■□□□□ 0.39
RTFDC1-204ENST00000449062 TFCP2Q12800 502 aa17.49■□□□□ 0.39
RTFDC1-204ENST00000449062 C2orf69Q8N8R5 385 aa17.49■□□□□ 0.39
RTFDC1-204ENST00000449062 SERPINA10Q9UK55 444 aa17.49■□□□□ 0.39
RTFDC1-204ENST00000449062 TTF2Q9UNY4 1162 aaKnown RBP17.49■□□□□ 0.39
RTFDC1-204ENST00000449062 ADORA1P30542 326 aa17.48■□□□□ 0.39
RTFDC1-204ENST00000449062 ECE1P42892 770 aa17.48■□□□□ 0.39
RTFDC1-204ENST00000449062 HDLBPQ00341 1268 aaKnown RBP17.48■□□□□ 0.39
RTFDC1-204ENST00000449062 FTSJ3Q8IY81 847 aaKnown RBP17.48■□□□□ 0.39
RTFDC1-204ENST00000449062 TBC1D22AQ8WUA7 517 aa17.48■□□□□ 0.39
RTFDC1-204ENST00000449062 FAM155AB1AL88 458 aaPredicted RBP17.47■□□□□ 0.39
RTFDC1-204ENST00000449062 MAP2K2P36507 400 aa17.47■□□□□ 0.39
RTFDC1-204ENST00000449062 FKBP1BP68106 108 aa17.47■□□□□ 0.39
RTFDC1-204ENST00000449062 CHAF1AQ13111 956 aaPredicted RBP17.47■□□□□ 0.39
RTFDC1-204ENST00000449062 ITPRIPQ8IWB1 547 aa17.47■□□□□ 0.39
RTFDC1-204ENST00000449062 ZIC5Q96T25 663 aa17.47■□□□□ 0.39
RTFDC1-204ENST00000449062 RCAN3Q9UKA8 241 aa17.47■□□□□ 0.39
RTFDC1-204ENST00000449062 SUGT1Q9Y2Z0 365 aa17.47■□□□□ 0.39
RTFDC1-204ENST00000449062 AOC2O75106 756 aa17.46■□□□□ 0.39
RTFDC1-204ENST00000449062 PHKA1P46020 1223 aa17.46■□□□□ 0.39
RTFDC1-204ENST00000449062 APOBEC3FQ8IUX4 373 aaKnown RBP17.46■□□□□ 0.39
RTFDC1-204ENST00000449062 DEFB129Q9H1M3 183 aa17.46■□□□□ 0.39
RTFDC1-204ENST00000449062 C1orf115Q9H7X2 142 aa17.46■□□□□ 0.39
RTFDC1-204ENST00000449062 NOP58Q9Y2X3 529 aaKnown RBP17.46■□□□□ 0.39
RTFDC1-204ENST00000449062 FOXN1O15353 648 aa17.45■□□□□ 0.38
RTFDC1-204ENST00000449062 FRAT2O75474 233 aaPredicted RBP17.45■□□□□ 0.38
RTFDC1-204ENST00000449062 CRKP46108 304 aa17.45■□□□□ 0.38
RTFDC1-204ENST00000449062 CCDC102BQ68D86 513 aa17.45■□□□□ 0.38
RTFDC1-204ENST00000449062 RGMBQ6NW40 437 aa17.45■□□□□ 0.38
RTFDC1-204ENST00000449062 MOB2Q70IA6 237 aa17.45■□□□□ 0.38
RTFDC1-204ENST00000449062 WDR66Q8TBY9 1149 aa17.45■□□□□ 0.38
RTFDC1-204ENST00000449062 ZNF70Q9UC06 446 aaPredicted RBP17.45■□□□□ 0.38
RTFDC1-204ENST00000449062 COL1A1P02452 1464 aaPredicted RBP17.44■□□□□ 0.38
RTFDC1-204ENST00000449062 A0A1B0GUL7 405 aa17.44■□□□□ 0.38
RTFDC1-204ENST00000449062 CLRN2A0PK11 232 aa17.44■□□□□ 0.38
RTFDC1-204ENST00000449062 MAP2K1Q02750 393 aaPredicted RBP17.44■□□□□ 0.38
RTFDC1-204ENST00000449062 G3BP1Q13283 466 aaKnown RBP eCLIP17.44■□□□□ 0.385e-10■■□□□ 13.8
RTFDC1-204ENST00000449062 SPDYE2Q495Y8 402 aa17.44■□□□□ 0.38
RTFDC1-204ENST00000449062 XAGE2Q96GT9 111 aa17.44■□□□□ 0.38
RTFDC1-204ENST00000449062 AKAP2Q9Y2D5 859 aa17.44■□□□□ 0.38
RTFDC1-204ENST00000449062 UBE2Q2LH0YL09 131 aa17.43■□□□□ 0.38
RTFDC1-204ENST00000449062 SEMA3EO15041 775 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms