RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 NOLC1Q14978 699 aaKnown RBP eCLIP9.14□□□□□ -0.95
RIF1-205ENST00000444746 ZNF408Q9H9D4 720 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 CCDC171Q6TFL3 1326 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 CRACR2AQ9BSW2 395 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 CWC15Q9P013 229 aaKnown RBP9.14□□□□□ -0.95
RIF1-205ENST00000444746 GSTTP1A0A1W2PQM5 241 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 SMARCC2Q8TAQ2 1214 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 ABCC10Q5T3U5 1492 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 GSPT1P15170 499 aaKnown RBP9.14□□□□□ -0.95
RIF1-205ENST00000444746 MAATS1Q7Z4T9 603 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 DCAF5Q96JK2 942 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 RABEP2Q9H5N1 569 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 MRVI1Q9Y6F6 885 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 KIAA0754O94854 1291 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 IFFO1Q0D2I5 559 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 SYT10Q6XYQ8 523 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 SMC5Q8IY18 1101 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 C19orf44Q9H6X5 657 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 TLR7Q9NYK1 1049 aaKnown RBP9.14□□□□□ -0.95
RIF1-205ENST00000444746 V9GY48 417 aaPredicted RBP9.14□□□□□ -0.95
RIF1-205ENST00000444746 LRRC24Q50LG9 513 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 DYDC1Q8WWB3 177 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 WDR7Q9Y4E6 1490 aa9.14□□□□□ -0.95
RIF1-205ENST00000444746 A0A087WWV3 80 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 PPP1R12BO60237 982 aaPredicted RBP9.13□□□□□ -0.95
RIF1-205ENST00000444746 IL17REQ8NFR9 667 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 CTNND2Q9UQB3 1225 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 CDC37L1Q7L3B6 337 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 MAPKAPK5Q8IW41 473 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 TSC1Q92574 1164 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 DUOX2Q9NRD8 1548 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 DNAJC21Q5F1R6 531 aaKnown RBP9.13□□□□□ -0.95
RIF1-205ENST00000444746 PKNOX2Q96KN3 472 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 CCNL1Q9UK58 526 aaPredicted RBP9.13□□□□□ -0.95
RIF1-205ENST00000444746 EIF3JO75822 258 aaKnown RBP9.13□□□□□ -0.95
RIF1-205ENST00000444746 RDXP35241 583 aaKnown RBP9.13□□□□□ -0.95
RIF1-205ENST00000444746 SLFNL1Q499Z3 407 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 BLZF1Q9H2G9 400 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
RIF1-205ENST00000444746 TRIM21P19474 475 aaKnown RBP9.13□□□□□ -0.95
RIF1-205ENST00000444746 PUS3Q9BZE2 481 aaKnown RBP9.13□□□□□ -0.95
RIF1-205ENST00000444746 DDX21Q9NR30 783 aaKnown RBP eCLIP9.13□□□□□ -0.95
RIF1-205ENST00000444746 CTAGE5O15320 804 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 RHOXF2BP0C7M4 288 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 RHOXF2Q9BQY4 288 aa9.13□□□□□ -0.95
RIF1-205ENST00000444746 LDHBP07195 334 aaKnown RBP9.12□□□□□ -0.95
RIF1-205ENST00000444746 VPS16Q9H269 839 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 PARP3Q9Y6F1 533 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 AKR1B10O60218 316 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 TBCAO75347 108 aaKnown RBP9.12□□□□□ -0.95
RIF1-205ENST00000444746 RPS6KB1P23443 525 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 KRT2P35908 639 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 PPP4R3AQ6IN85 833 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 ZNF804AQ7Z570 1209 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 SLF2Q8IX21 1173 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 METTL22Q9BUU2 404 aaPredicted RBP9.12□□□□□ -0.95
RIF1-205ENST00000444746 ZC3H12CQ9C0D7 883 aaKnown RBP9.12□□□□□ -0.95
RIF1-205ENST00000444746 PHACTR2O75167 634 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 RRAGDQ9NQL2 400 aaPredicted RBP9.12□□□□□ -0.95
RIF1-205ENST00000444746 HOMER2Q9NSB8 354 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 GUCA1BQ9UMX6 200 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 EIF4A1P60842 406 aaKnown RBP9.12□□□□□ -0.95
RIF1-205ENST00000444746 TPTE2Q6XPS3 522 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 DHX32Q7L7V1 743 aaKnown RBP9.12□□□□□ -0.95
RIF1-205ENST00000444746 TRMT44Q8IYL2 757 aaKnown RBP9.12□□□□□ -0.95
RIF1-205ENST00000444746 SLC52A2Q9HAB3 445 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 PTPROQ16827 1216 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 USH1GQ495M9 461 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 VTI1AQ96AJ9 217 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 EYA2O00167 538 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 DYMQ7RTS9 669 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 HINFPQ9BQA5 517 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 RAB34Q9BZG1 259 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 CGNQ9P2M7 1197 aaKnown RBP9.12□□□□□ -0.95
RIF1-205ENST00000444746 LMAN1P49257 510 aa9.12□□□□□ -0.95
RIF1-205ENST00000444746 LMTK3Q96Q04 1460 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 GPAA1O43292 621 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 UBXN1Q04323 297 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 TRAPPC3LQ5T215 181 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 CCDC191Q8NCU4 936 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 ZSCAN16Q9H4T2 348 aaPredicted RBP9.11□□□□□ -0.95
RIF1-205ENST00000444746 KDM2BQ8NHM5 1336 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 USO1O60763 962 aaKnown RBP9.11□□□□□ -0.95
RIF1-205ENST00000444746 CTNNA2P26232 953 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 CCDC174Q6PII3 467 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 CCDC66A2RUB6 948 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 CHL1O00533 1208 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 TXKP42681 527 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 GYG1P46976 350 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 GSTO1P78417 241 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 TEX11Q8IYF3 940 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 GOLGA8HP0CJ92 632 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 DOK7Q18PE1 504 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 PLBD2Q8NHP8 589 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 TRIM75PA6NK02 468 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 UNC5CLQ8IV45 518 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 TGFBRAP1Q8WUH2 860 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 TOM1O60784 492 aa9.11□□□□□ -0.95
RIF1-205ENST00000444746 MCM6Q14566 821 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms