RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SSH1Q8WYL5 1049 aa26.51■■□□□ 1.83
VSX1-206ENST00000444511 CSRNP1Q96S65 589 aa26.51■■□□□ 1.83
VSX1-206ENST00000444511 BICC1Q9H694 974 aaKnown RBP26.51■■□□□ 1.83
VSX1-206ENST00000444511 F8W031 263 aaPredicted RBP26.5■■□□□ 1.83
VSX1-206ENST00000444511 TRPA1O75762 1119 aa26.5■■□□□ 1.83
VSX1-206ENST00000444511 FKBP1AP62942 108 aaKnown RBP26.5■■□□□ 1.83
VSX1-206ENST00000444511 UBE4AQ14139 1066 aa26.5■■□□□ 1.83
VSX1-206ENST00000444511 REM2Q8IYK8 340 aaPredicted RBP26.5■■□□□ 1.83
VSX1-206ENST00000444511 PUS3Q9BZE2 481 aaKnown RBP26.5■■□□□ 1.83
VSX1-206ENST00000444511 RNF186Q9NXI6 227 aa26.5■■□□□ 1.83
VSX1-206ENST00000444511 JAG2Q9Y219 1238 aa26.5■■□□□ 1.83
VSX1-206ENST00000444511 RABL6Q3YEC7 729 aaPredicted RBP26.48■■□□□ 1.83
VSX1-206ENST00000444511 MTMR14Q8NCE2 650 aa26.48■■□□□ 1.83
VSX1-206ENST00000444511 MROH5Q6ZUA9 1318 aa26.47■■□□□ 1.83
VSX1-206ENST00000444511 MCOLN1Q9GZU1 580 aa26.47■■□□□ 1.83
VSX1-206ENST00000444511 CCDC85CA6NKD9 419 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 MYO1BO43795 1136 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 HIBADHP31937 336 aaKnown RBP26.46■■□□□ 1.83
VSX1-206ENST00000444511 GYG1P46976 350 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 DGKZQ13574 1117 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 PRKG1Q13976 671 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 CFAP100Q494V2 611 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 ARMC9Q7Z3E5 817 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 CDCA7LQ96GN5 454 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 DEFB129Q9H1M3 183 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 RIPOR2Q9Y4F9 1068 aa26.46■■□□□ 1.83
VSX1-206ENST00000444511 FAM205AQ6ZU69 1335 aa26.45■■□□□ 1.83
VSX1-206ENST00000444511 COL1A1P02452 1464 aaPredicted RBP26.45■■□□□ 1.82
VSX1-206ENST00000444511 ALDH1L2Q3SY69 923 aa26.45■■□□□ 1.82
VSX1-206ENST00000444511 ANKRD44Q8N8A2 993 aa26.45■■□□□ 1.82
VSX1-206ENST00000444511 TDRD7Q8NHU6 1098 aaKnown RBP26.45■■□□□ 1.82
VSX1-206ENST00000444511 SPDYE2BA6NHP3 402 aa26.44■■□□□ 1.82
VSX1-206ENST00000444511 SPDYE6P0CI01 402 aa26.44■■□□□ 1.82
VSX1-206ENST00000444511 RBM5P52756 815 aaKnown RBP eCLIP26.44■■□□□ 1.82
VSX1-206ENST00000444511 FAM84BQ96KN1 310 aaPredicted RBP26.44■■□□□ 1.82
VSX1-206ENST00000444511 SMC4Q9NTJ3 1288 aa26.44■■□□□ 1.82
VSX1-206ENST00000444511 PCDHAC2Q9Y5I4 1007 aa26.44■■□□□ 1.82
VSX1-206ENST00000444511 CASP8AP2Q9UKL3 1982 aa26.44■■□□□ 1.82
VSX1-206ENST00000444511 CLRN2A0PK11 232 aa26.43■■□□□ 1.82
VSX1-206ENST00000444511 METTL24Q5JXM2 366 aa26.43■■□□□ 1.82
VSX1-206ENST00000444511 MFSD14BQ5SR56 506 aa26.43■■□□□ 1.82
VSX1-206ENST00000444511 USP44Q9H0E7 712 aa26.43■■□□□ 1.82
VSX1-206ENST00000444511 PPP2R3BQ9Y5P8 575 aa26.43■■□□□ 1.82
VSX1-206ENST00000444511 LRRC24Q50LG9 513 aa26.42■■□□□ 1.82
VSX1-206ENST00000444511 VPS37DQ86XT2 251 aa26.42■■□□□ 1.82
VSX1-206ENST00000444511 PRMT6Q96LA8 375 aaPredicted RBP26.42■■□□□ 1.82
VSX1-206ENST00000444511 VEZTQ9HBM0 779 aa26.42■■□□□ 1.82
VSX1-206ENST00000444511 ANGEL1Q9UNK9 670 aaKnown RBP26.42■■□□□ 1.82
VSX1-206ENST00000444511 PTPN12Q05209 780 aaKnown RBP26.41■■□□□ 1.82
VSX1-206ENST00000444511 MKRN3Q13064 507 aaKnown RBP26.4■■□□□ 1.82
VSX1-206ENST00000444511 TTF2Q9UNY4 1162 aaKnown RBP26.4■■□□□ 1.82
VSX1-206ENST00000444511 CAVIN4Q5BKX8 364 aa26.39■■□□□ 1.82
VSX1-206ENST00000444511 KLHDC4Q8TBB5 520 aa26.39■■□□□ 1.82
VSX1-206ENST00000444511 AKAP11Q9UKA4 1901 aa26.39■■□□□ 1.81
VSX1-206ENST00000444511 PPP1R12BO60237 982 aaPredicted RBP26.38■■□□□ 1.81
VSX1-206ENST00000444511 PDE8BO95263 885 aa26.38■■□□□ 1.81
VSX1-206ENST00000444511 LDLRAD1Q5T700 205 aa26.38■■□□□ 1.81
VSX1-206ENST00000444511 TRMT2AQ8IZ69 625 aaKnown RBP26.38■■□□□ 1.81
VSX1-206ENST00000444511 SERPINA10Q9UK55 444 aa26.38■■□□□ 1.81
VSX1-206ENST00000444511 FZD1Q9UP38 647 aa26.38■■□□□ 1.81
VSX1-206ENST00000444511 FRAT2O75474 233 aaPredicted RBP26.37■■□□□ 1.81
VSX1-206ENST00000444511 SUPT20HL1Q3ZLR7 823 aa26.37■■□□□ 1.81
VSX1-206ENST00000444511 FBXO33Q7Z6M2 555 aa26.37■■□□□ 1.81
VSX1-206ENST00000444511 IQSEC3Q9UPP2 1182 aaPredicted RBP26.37■■□□□ 1.81
VSX1-206ENST00000444511 AOX1Q06278 1338 aa26.37■■□□□ 1.81
VSX1-206ENST00000444511 CCER2I3L3R5 266 aa26.36■■□□□ 1.81
VSX1-206ENST00000444511 CT47B1P0C2W7 299 aaPredicted RBP26.36■■□□□ 1.81
VSX1-206ENST00000444511 TM4SF4P48230 202 aa26.36■■□□□ 1.81
VSX1-206ENST00000444511 SREBF2Q12772 1141 aa26.36■■□□□ 1.81
VSX1-206ENST00000444511 CHAF1AQ13111 956 aaPredicted RBP26.36■■□□□ 1.81
VSX1-206ENST00000444511 VGLL2Q8N8G2 317 aa26.36■■□□□ 1.81
VSX1-206ENST00000444511 RASA3Q14644 834 aa26.35■■□□□ 1.81
VSX1-206ENST00000444511 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.35■■□□□ 1.81
VSX1-206ENST00000444511 SSC5DA1L4H1 1573 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 TNFAIP1Q13829 316 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 MAP3K11Q16584 847 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 NBPF12Q5TAG4 269 aaPredicted RBP26.34■■□□□ 1.81
VSX1-206ENST00000444511 SPRYD7Q5W111 196 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 SLC10A4Q96EP9 437 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 ECM29Q5VYK3 1845 aa26.34■■□□□ 1.81
VSX1-206ENST00000444511 TBC1D8O95759 1140 aa26.33■■□□□ 1.81
VSX1-206ENST00000444511 IFIT1P09914 478 aaKnown RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 UBTFL1P0CB47 393 aaPredicted RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 CRKP46108 304 aa26.33■■□□□ 1.81
VSX1-206ENST00000444511 PUM3Q15397 648 aaKnown RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 SPDYE2Q495Y8 402 aa26.33■■□□□ 1.81
VSX1-206ENST00000444511 TBC1D22AQ8WUA7 517 aa26.33■■□□□ 1.81
VSX1-206ENST00000444511 TDRD3Q9H7E2 651 aaKnown RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 ZNF70Q9UC06 446 aaPredicted RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 NOB1Q9ULX3 412 aaKnown RBP26.33■■□□□ 1.81
VSX1-206ENST00000444511 EYA2O00167 538 aa26.32■■□□□ 1.8
VSX1-206ENST00000444511 BCAMP50895 628 aa26.32■■□□□ 1.8
VSX1-206ENST00000444511 DZIP1LQ8IYY4 767 aaKnown RBP26.32■■□□□ 1.8
VSX1-206ENST00000444511 IREB2P48200 963 aaKnown RBP26.31■■□□□ 1.8
VSX1-206ENST00000444511 RFX5P48382 616 aaPredicted RBP26.31■■□□□ 1.8
VSX1-206ENST00000444511 CTU1Q7Z7A3 348 aaKnown RBP26.31■■□□□ 1.8
VSX1-206ENST00000444511 API5Q9BZZ5 524 aaKnown RBP26.31■■□□□ 1.8
VSX1-206ENST00000444511 UNCXA6NJT0 531 aa26.3■■□□□ 1.8
VSX1-206ENST00000444511 GRIK5Q16478 980 aa26.3■■□□□ 1.8
VSX1-206ENST00000444511 CLMNQ96JQ2 1002 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms