RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 PDE8AO60658 829 aa25.65■■□□□ 1.7
CTDSPL-206ENST00000443503 PICALMQ13492 652 aa25.65■■□□□ 1.7
CTDSPL-206ENST00000443503 CABP5Q9NP86 173 aa25.65■■□□□ 1.7
CTDSPL-206ENST00000443503 STAT6P42226 847 aa25.65■■□□□ 1.7
CTDSPL-206ENST00000443503 OTUD7BQ6GQQ9 843 aa25.65■■□□□ 1.7
CTDSPL-206ENST00000443503 FEZ1Q99689 392 aa25.65■■□□□ 1.7
CTDSPL-206ENST00000443503 PUM3Q15397 648 aaKnown RBP25.65■■□□□ 1.7
CTDSPL-206ENST00000443503 TCERG1LQ5VWI1 586 aa25.65■■□□□ 1.7
CTDSPL-206ENST00000443503 LMBRD1Q9NUN5 540 aa25.64■■□□□ 1.7
CTDSPL-206ENST00000443503 ATP7BP35670 1465 aa25.64■■□□□ 1.7
CTDSPL-206ENST00000443503 ZNF853P0CG23 659 aa25.64■■□□□ 1.7
CTDSPL-206ENST00000443503 ATP5JP18859 108 aa25.64■■□□□ 1.7
CTDSPL-206ENST00000443503 GBP3Q9H0R5 595 aa25.64■■□□□ 1.7
CTDSPL-206ENST00000443503 TSPYL1Q9H0U9 437 aa25.64■■□□□ 1.7
CTDSPL-206ENST00000443503 ERCC6L2Q5T890 1561 aa25.64■■□□□ 1.69
CTDSPL-206ENST00000443503 USO1O60763 962 aaKnown RBP25.64■■□□□ 1.69
CTDSPL-206ENST00000443503 CRACR2AQ9BSW2 395 aa25.64■■□□□ 1.69
CTDSPL-206ENST00000443503 ZSWIM4Q9H7M6 989 aa25.64■■□□□ 1.69
CTDSPL-206ENST00000443503 SLAIN2Q9P270 581 aa25.64■■□□□ 1.69
CTDSPL-206ENST00000443503 TAF5LO75529 589 aa25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 PTGS1P23219 599 aa25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 NAPAP54920 295 aa25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 CCDC178Q5BJE1 867 aa25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 JAKMIP3Q5VZ66 844 aa25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 ARMT1Q9H993 441 aa25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 GADD45BO75293 160 aaPredicted RBP25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 CALM1P0DP23 149 aa25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 CALM2P0DP24 149 aa25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 CALM3P0DP25 149 aa25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 PARP10Q53GL7 1025 aa25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 ZNF804AQ7Z570 1209 aa25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 IBTKQ9P2D0 1353 aaPredicted RBP25.63■■□□□ 1.69
CTDSPL-206ENST00000443503 MATR3P43243 847 aaKnown RBP eCLIP25.62■■□□□ 1.692e-6■■■□□ 18.7
CTDSPL-206ENST00000443503 GOLGA6L9A6NEM1 432 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 ZAP70P43403 619 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 PTH1RQ03431 593 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 PROSER3Q2NL68 480 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 ANGEL1Q9UNK9 670 aaKnown RBP25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 GNPATO15228 680 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 JAK2O60674 1132 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 HS1BP3Q53T59 392 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 TTLL7Q6ZT98 887 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 RMND1Q9NWS8 449 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 ZCCHC11Q5TAX3 1644 aaKnown RBP25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 RTL9Q8NET4 1388 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 VPS36Q86VN1 386 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 TM6SF1Q9BZW5 370 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 EXOC1Q9NV70 894 aa25.62■■□□□ 1.69
CTDSPL-206ENST00000443503 DYNC1I1O14576 645 aa25.61■■□□□ 1.69
CTDSPL-206ENST00000443503 BRD1O95696 1058 aa25.61■■□□□ 1.69
CTDSPL-206ENST00000443503 A0A0D9SFI3 127 aa25.61■■□□□ 1.69
CTDSPL-206ENST00000443503 PLEKHG1Q9ULL1 1385 aa25.61■■□□□ 1.69
CTDSPL-206ENST00000443503 FAM160A1Q05DH4 1040 aa25.61■■□□□ 1.69
CTDSPL-206ENST00000443503 WWC2Q6AWC2 1192 aa25.61■■□□□ 1.69
CTDSPL-206ENST00000443503 ZC3H12CQ9C0D7 883 aaKnown RBP25.61■■□□□ 1.69
CTDSPL-206ENST00000443503 CALML3P27482 149 aa25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 USP6P35125 1406 aa25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 LDHBP07195 334 aaKnown RBP25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 PAXBP1Q9Y5B6 917 aa25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 TRIM21P19474 475 aaKnown RBP25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 STX17P56962 302 aa25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 ATL3Q6DD88 541 aa25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 LLPHQ9BRT6 129 aaKnown RBP25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 CGNQ9P2M7 1197 aaKnown RBP25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 CFAP74Q9C0B2 1584 aa25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 PKP1Q13835 747 aa25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 CDC37L1Q7L3B6 337 aa25.6■■□□□ 1.69
CTDSPL-206ENST00000443503 PRDM1O75626 825 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 DNAI1Q9UI46 699 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 KDRP35968 1356 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 ERICH4A6NGS2 130 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 TCIRG1Q13488 830 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 CNKSR2Q8WXI2 1034 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.59■■□□□ 1.696e-6■□□□□ 9.5
CTDSPL-206ENST00000443503 IFNKQ9P0W0 207 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 PAFAH1B1P43034 410 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 CDC42BPAQ5VT25 1732 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 FAM114A1Q8IWE2 563 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 TMEM87BQ96K49 555 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 SPAG1Q07617 926 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 ME3Q16798 604 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 ARHGEF25Q86VW2 580 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 ANKRD2Q9GZV1 360 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 PRDM10Q9NQV6 1147 aa25.59■■□□□ 1.69
CTDSPL-206ENST00000443503 ZNF445P59923 1031 aa25.58■■□□□ 1.69
CTDSPL-206ENST00000443503 UNC5CLQ8IV45 518 aa25.58■■□□□ 1.69
CTDSPL-206ENST00000443503 KRT2P35908 639 aa25.58■■□□□ 1.69
CTDSPL-206ENST00000443503 LEO1Q8WVC0 666 aaPredicted RBP25.58■■□□□ 1.69
CTDSPL-206ENST00000443503 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.58■■□□□ 1.692e-7■■■■■ 33.6
CTDSPL-206ENST00000443503 SIRT2Q8IXJ6 389 aa25.58■■□□□ 1.69
CTDSPL-206ENST00000443503 KRI1Q8N9T8 703 aaKnown RBP25.58■■□□□ 1.69
CTDSPL-206ENST00000443503 KIF1BO60333 1816 aa25.57■■□□□ 1.68
CTDSPL-206ENST00000443503 LPIN2Q92539 896 aa25.57■■□□□ 1.68
CTDSPL-206ENST00000443503 SEC62Q99442 399 aaKnown RBP25.57■■□□□ 1.68
CTDSPL-206ENST00000443503 TMEM63CQ9P1W3 806 aa25.57■■□□□ 1.68
CTDSPL-206ENST00000443503 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
CTDSPL-206ENST00000443503 ERVV-2B6SEH9 535 aa25.57■■□□□ 1.68
CTDSPL-206ENST00000443503 DENND2AQ9ULE3 1009 aa25.57■■□□□ 1.68
CTDSPL-206ENST00000443503 ASIC1P78348 528 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms