RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 CCDC9Q9Y3X0 531 aaKnown RBP19.48■□□□□ 0.71
PMS1-213ENST00000441310 SFPQP23246 707 aaKnown RBP eCLIP19.48■□□□□ 0.71
PMS1-213ENST00000441310 ETF1P62495 437 aaKnown RBP19.48■□□□□ 0.71
PMS1-213ENST00000441310 UBE3BQ7Z3V4 1068 aa19.48■□□□□ 0.71
PMS1-213ENST00000441310 NEURL1BA8MQ27 555 aa19.47■□□□□ 0.71
PMS1-213ENST00000441310 ANKRD65E5RJM6 399 aa19.47■□□□□ 0.71
PMS1-213ENST00000441310 GUCY2CP25092 1073 aa19.47■□□□□ 0.71
PMS1-213ENST00000441310 ZSWIM6Q9HCJ5 1215 aa19.47■□□□□ 0.71
PMS1-213ENST00000441310 APPP05067 770 aa19.47■□□□□ 0.71
PMS1-213ENST00000441310 ACTN2P35609 894 aa19.47■□□□□ 0.71
PMS1-213ENST00000441310 A1BGP04217 495 aa19.47■□□□□ 0.71
PMS1-213ENST00000441310 NOM1Q5C9Z4 860 aaKnown RBP19.47■□□□□ 0.71
PMS1-213ENST00000441310 G3BP1Q13283 466 aaKnown RBP eCLIP19.46■□□□□ 0.71
PMS1-213ENST00000441310 GCKRQ14397 625 aa19.46■□□□□ 0.71
PMS1-213ENST00000441310 HSP90AB4PQ58FF6 505 aa19.46■□□□□ 0.71
PMS1-213ENST00000441310 LEKR1Q6ZMV7 388 aa19.46■□□□□ 0.71
PMS1-213ENST00000441310 NCAPGQ9BPX3 1015 aa19.46■□□□□ 0.71
PMS1-213ENST00000441310 PSDA5PKW4 1024 aaPredicted RBP19.46■□□□□ 0.71
PMS1-213ENST00000441310 PRR29P0C7W0 189 aa19.46■□□□□ 0.71
PMS1-213ENST00000441310 FOXR1Q6PIV2 292 aa19.46■□□□□ 0.71
PMS1-213ENST00000441310 WDR17Q8IZU2 1322 aa19.46■□□□□ 0.71
PMS1-213ENST00000441310 CCDC158Q5M9N0 1113 aa19.46■□□□□ 0.7
PMS1-213ENST00000441310 EXOC4Q96A65 974 aa19.46■□□□□ 0.7
PMS1-213ENST00000441310 TLR7Q9NYK1 1049 aaKnown RBP19.46■□□□□ 0.7
PMS1-213ENST00000441310 H3BQF6 201 aa19.45■□□□□ 0.7
PMS1-213ENST00000441310 SASH1O94885 1247 aa19.45■□□□□ 0.7
PMS1-213ENST00000441310 METTL22Q9BUU2 404 aaPredicted RBP19.45■□□□□ 0.7
PMS1-213ENST00000441310 OSBPL5Q9H0X9 879 aaPredicted RBP19.45■□□□□ 0.7
PMS1-213ENST00000441310 ARFGAP3Q9NP61 516 aa19.45■□□□□ 0.7
PMS1-213ENST00000441310 OVOS2A0A0G2JMS6 1433 aa19.45■□□□□ 0.7
PMS1-213ENST00000441310 ATP8B1O43520 1251 aa19.45■□□□□ 0.7
PMS1-213ENST00000441310 PSEN1P49768 467 aa19.45■□□□□ 0.7
PMS1-213ENST00000441310 XPO4Q9C0E2 1151 aaKnown RBP19.45■□□□□ 0.7
PMS1-213ENST00000441310 IFNKQ9P0W0 207 aa19.45■□□□□ 0.7
PMS1-213ENST00000441310 PLEKHG2Q9H7P9 1386 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 AOX1Q06278 1338 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 EFCAB8A8MWE9 144 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 FOSBP53539 338 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 E2F4Q16254 413 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 CEP57L1Q8IYX8 460 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 EAF2Q96CJ1 260 aaPredicted RBP19.44■□□□□ 0.7
PMS1-213ENST00000441310 NRDCO43847 1150 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 MTX1Q13505 466 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 TTLL7Q6ZT98 887 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 CCAR1Q8IX12 1150 aaKnown RBP19.44■□□□□ 0.7
PMS1-213ENST00000441310 ANO10Q9NW15 660 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 CAMTA1Q9Y6Y1 1673 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 FANCGO15287 622 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 MYCNP04198 464 aaPredicted RBP19.44■□□□□ 0.7
PMS1-213ENST00000441310 BRMS1Q9HCU9 246 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 VPS18Q9P253 973 aa19.44■□□□□ 0.7
PMS1-213ENST00000441310 COL18A1P39060 1754 aa19.43■□□□□ 0.7
PMS1-213ENST00000441310 A0A087WZG4 1122 aa19.43■□□□□ 0.7
PMS1-213ENST00000441310 NBPF26B4DH59 902 aa19.43■□□□□ 0.7
PMS1-213ENST00000441310 ZKSCAN1P17029 563 aaPredicted RBP19.43■□□□□ 0.7
PMS1-213ENST00000441310 MMP14P50281 582 aa19.43■□□□□ 0.7
PMS1-213ENST00000441310 NBPF14Q5TI25 921 aa19.43■□□□□ 0.7
PMS1-213ENST00000441310 NBPF10Q6P3W6 841 aaKnown RBP19.43■□□□□ 0.7
PMS1-213ENST00000441310 NBPF15Q8N660 670 aa19.43■□□□□ 0.7
PMS1-213ENST00000441310 CCDC150Q8NCX0 1101 aa19.43■□□□□ 0.7
PMS1-213ENST00000441310 ZBTB3Q9H5J0 574 aa19.43■□□□□ 0.7
PMS1-213ENST00000441310 FTOQ9C0B1 505 aaKnown RBP eCLIP19.43■□□□□ 0.7
PMS1-213ENST00000441310 SOS2Q07890 1332 aaPredicted RBP19.42■□□□□ 0.7
PMS1-213ENST00000441310 IL2RBP14784 551 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 LRRFIP1Q32MZ4 808 aaKnown RBP19.42■□□□□ 0.7
PMS1-213ENST00000441310 BOLA2Q9H3K6 86 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 ECHDC1Q9NTX5 307 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 TPM1P09493 284 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 LRP10Q7Z4F1 713 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 GOLPH3LQ9H4A5 285 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 NDUFB9Q9Y6M9 179 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 CPDO75976 1380 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 PHLPP2Q6ZVD8 1323 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 JAK2O60674 1132 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 MAGEA9P43362 315 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 FUT8Q9BYC5 575 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 IMPACTQ9P2X3 320 aa19.42■□□□□ 0.7
PMS1-213ENST00000441310 KINO60870 393 aaKnown RBP19.41■□□□□ 0.7
PMS1-213ENST00000441310 GLRX3O76003 335 aaKnown RBP19.41■□□□□ 0.7
PMS1-213ENST00000441310 TSGA10IPQ3SY00 556 aa19.41■□□□□ 0.7
PMS1-213ENST00000441310 EIF3CLB5ME19 914 aaKnown RBP19.41■□□□□ 0.7
PMS1-213ENST00000441310 CCDC73Q6ZRK6 1079 aa19.41■□□□□ 0.7
PMS1-213ENST00000441310 EIF3CQ99613 913 aaKnown RBP19.41■□□□□ 0.7
PMS1-213ENST00000441310 SRRTQ9BXP5 876 aaKnown RBP19.41■□□□□ 0.7
PMS1-213ENST00000441310 PARD6BQ9BYG5 372 aa19.41■□□□□ 0.7
PMS1-213ENST00000441310 TM6SF1Q9BZW5 370 aa19.41■□□□□ 0.7
PMS1-213ENST00000441310 DEF6Q9H4E7 631 aa19.41■□□□□ 0.7
PMS1-213ENST00000441310 PARP3Q9Y6F1 533 aa19.41■□□□□ 0.7
PMS1-213ENST00000441310 A0A0G2JS52 829 aa19.4■□□□□ 0.7
PMS1-213ENST00000441310 H3BQV1 296 aa19.4■□□□□ 0.7
PMS1-213ENST00000441310 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
PMS1-213ENST00000441310 TRIM65Q6PJ69 517 aa19.4■□□□□ 0.7
PMS1-213ENST00000441310 EP400NLQ6ZTU2 488 aa19.4■□□□□ 0.7
PMS1-213ENST00000441310 EDC3Q96F86 508 aaKnown RBP19.4■□□□□ 0.7
PMS1-213ENST00000441310 BRF1Q92994 677 aa19.4■□□□□ 0.7
PMS1-213ENST00000441310 RNF216Q9NWF9 866 aaPredicted RBP19.4■□□□□ 0.7
PMS1-213ENST00000441310 RBM8AQ9Y5S9 174 aaKnown RBP19.4■□□□□ 0.7
PMS1-213ENST00000441310 CTAGE5O15320 804 aa19.4■□□□□ 0.7
PMS1-213ENST00000441310 PSD3Q9NYI0 1048 aa19.4■□□□□ 0.7
PMS1-213ENST00000441310 PCDH11XQ9BZA7 1347 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms