RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 MKRN3Q13064 507 aaKnown RBP23.04■■□□□ 1.28
GTF3A-204ENST00000438571 HDAC9Q9UKV0 1011 aa23.04■■□□□ 1.28
GTF3A-204ENST00000438571 IL1R1P14778 569 aa23.02■■□□□ 1.28
GTF3A-204ENST00000438571 CCDC57Q2TAC2 916 aa23.02■■□□□ 1.28
GTF3A-204ENST00000438571 TAF7LQ5H9L4 462 aa23.02■■□□□ 1.28
GTF3A-204ENST00000438571 LDHAL6AQ6ZMR3 332 aa23.02■■□□□ 1.28
GTF3A-204ENST00000438571 APOBEC3FQ8IUX4 373 aaKnown RBP23.02■■□□□ 1.28
GTF3A-204ENST00000438571 PUS3Q9BZE2 481 aaKnown RBP23.02■■□□□ 1.28
GTF3A-204ENST00000438571 SRCIN1Q9C0H9 1055 aa23.02■■□□□ 1.28
GTF3A-204ENST00000438571 CNNM1Q9NRU3 951 aa23.02■■□□□ 1.28
GTF3A-204ENST00000438571 C9orf78Q9NZ63 289 aaPredicted RBP23.02■■□□□ 1.28
GTF3A-204ENST00000438571 COL1A1P02452 1464 aaPredicted RBP23.02■■□□□ 1.28
GTF3A-204ENST00000438571 ALDH1L1O75891 902 aa23.01■■□□□ 1.27
GTF3A-204ENST00000438571 NBPF7P0C2Y1 421 aaPredicted RBP23.01■■□□□ 1.27
GTF3A-204ENST00000438571 ZNF804AQ7Z570 1209 aa23.01■■□□□ 1.27
GTF3A-204ENST00000438571 PTPN12Q05209 780 aaKnown RBP23■■□□□ 1.27
GTF3A-204ENST00000438571 CLRN2A0PK11 232 aa22.99■■□□□ 1.27
GTF3A-204ENST00000438571 NF2P35240 595 aa22.99■■□□□ 1.27
GTF3A-204ENST00000438571 RGS19P49795 217 aa22.99■■□□□ 1.27
GTF3A-204ENST00000438571 DLGAP5Q15398 846 aa22.99■■□□□ 1.27
GTF3A-204ENST00000438571 CFAP100Q494V2 611 aa22.99■■□□□ 1.27
GTF3A-204ENST00000438571 MRPL50Q8N5N7 158 aaKnown RBP22.99■■□□□ 1.27
GTF3A-204ENST00000438571 GYG1P46976 350 aa22.98■■□□□ 1.27
GTF3A-204ENST00000438571 MMP14P50281 582 aa22.98■■□□□ 1.27
GTF3A-204ENST00000438571 MTMR14Q8NCE2 650 aa22.98■■□□□ 1.27
GTF3A-204ENST00000438571 ANGEL1Q9UNK9 670 aaKnown RBP22.98■■□□□ 1.27
GTF3A-204ENST00000438571 TBC1D8O95759 1140 aa22.97■■□□□ 1.27
GTF3A-204ENST00000438571 PRMT6Q96LA8 375 aaPredicted RBP22.97■■□□□ 1.27
GTF3A-204ENST00000438571 DEFB129Q9H1M3 183 aa22.97■■□□□ 1.27
GTF3A-204ENST00000438571 BICC1Q9H694 974 aaKnown RBP22.97■■□□□ 1.27
GTF3A-204ENST00000438571 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.97■■□□□ 1.27
GTF3A-204ENST00000438571 SPDYE2BA6NHP3 402 aa22.96■■□□□ 1.27
GTF3A-204ENST00000438571 SPDYE6P0CI01 402 aa22.96■■□□□ 1.27
GTF3A-204ENST00000438571 ARMC9Q7Z3E5 817 aa22.96■■□□□ 1.27
GTF3A-204ENST00000438571 REM2Q8IYK8 340 aaPredicted RBP22.96■■□□□ 1.27
GTF3A-204ENST00000438571 UTYO14607 1347 aa22.96■■□□□ 1.27
GTF3A-204ENST00000438571 TNRC18O15417 2968 aaPredicted RBP22.96■■□□□ 1.27
GTF3A-204ENST00000438571 FKBP1AP62942 108 aaKnown RBP22.95■■□□□ 1.26
GTF3A-204ENST00000438571 MLLT1Q03111 559 aaPredicted RBP22.95■■□□□ 1.26
GTF3A-204ENST00000438571 LDLRAD1Q5T700 205 aa22.95■■□□□ 1.26
GTF3A-204ENST00000438571 FAM205AQ6ZU69 1335 aa22.95■■□□□ 1.26
GTF3A-204ENST00000438571 ANKRD44Q8N8A2 993 aa22.95■■□□□ 1.26
GTF3A-204ENST00000438571 LRRC24Q50LG9 513 aa22.94■■□□□ 1.26
GTF3A-204ENST00000438571 TDRD7Q8NHU6 1098 aaKnown RBP22.94■■□□□ 1.26
GTF3A-204ENST00000438571 CLMNQ96JQ2 1002 aa22.94■■□□□ 1.26
GTF3A-204ENST00000438571 FAM84BQ96KN1 310 aaPredicted RBP22.94■■□□□ 1.26
GTF3A-204ENST00000438571 R3HDMLQ9H3Y0 253 aa22.94■■□□□ 1.26
GTF3A-204ENST00000438571 VEZTQ9HBM0 779 aa22.94■■□□□ 1.26
GTF3A-204ENST00000438571 RIPOR2Q9Y4F9 1068 aa22.94■■□□□ 1.26
GTF3A-204ENST00000438571 TM4SF4P48230 202 aa22.93■■□□□ 1.26
GTF3A-204ENST00000438571 SOX10P56693 466 aa22.93■■□□□ 1.26
GTF3A-204ENST00000438571 UBE4AQ14139 1066 aa22.93■■□□□ 1.26
GTF3A-204ENST00000438571 GRIK5Q16478 980 aa22.93■■□□□ 1.26
GTF3A-204ENST00000438571 RABL6Q3YEC7 729 aaPredicted RBP22.93■■□□□ 1.26
GTF3A-204ENST00000438571 CTU1Q7Z7A3 348 aaKnown RBP22.93■■□□□ 1.26
GTF3A-204ENST00000438571 KLHDC4Q8TBB5 520 aa22.93■■□□□ 1.26
GTF3A-204ENST00000438571 ZNF296Q8WUU4 475 aaPredicted RBP22.93■■□□□ 1.26
GTF3A-204ENST00000438571 MFSD14BQ5SR56 506 aa22.92■■□□□ 1.26
GTF3A-204ENST00000438571 NBPF12Q5TAG4 269 aaPredicted RBP22.92■■□□□ 1.26
GTF3A-204ENST00000438571 SPRYD7Q5W111 196 aa22.92■■□□□ 1.26
GTF3A-204ENST00000438571 SSH1Q8WYL5 1049 aa22.92■■□□□ 1.26
GTF3A-204ENST00000438571 IQSEC3Q9UPP2 1182 aaPredicted RBP22.92■■□□□ 1.26
GTF3A-204ENST00000438571 HIBADHP31937 336 aaKnown RBP22.91■■□□□ 1.26
GTF3A-204ENST00000438571 RBM5P52756 815 aaKnown RBP eCLIP22.91■■□□□ 1.26
GTF3A-204ENST00000438571 CDAN1Q8IWY9 1227 aa22.91■■□□□ 1.26
GTF3A-204ENST00000438571 MAP3K11Q16584 847 aa22.9■■□□□ 1.26
GTF3A-204ENST00000438571 TTF2Q9UNY4 1162 aaKnown RBP22.9■■□□□ 1.26
GTF3A-204ENST00000438571 PPP2R3BQ9Y5P8 575 aa22.9■■□□□ 1.26
GTF3A-204ENST00000438571 RASA3Q14644 834 aa22.89■■□□□ 1.25
GTF3A-204ENST00000438571 VGLL2Q8N8G2 317 aa22.89■■□□□ 1.25
GTF3A-204ENST00000438571 CDCA7LQ96GN5 454 aa22.89■■□□□ 1.25
GTF3A-204ENST00000438571 TDRD3Q9H7E2 651 aaKnown RBP22.89■■□□□ 1.25
GTF3A-204ENST00000438571 PDE4DIPQ5VU43 2346 aa22.89■■□□□ 1.25
GTF3A-204ENST00000438571 AK9Q5TCS8 1911 aa22.88■■□□□ 1.25
GTF3A-204ENST00000438571 PTPRCP08575 1304 aa22.88■■□□□ 1.25
GTF3A-204ENST00000438571 MROH5Q6ZUA9 1318 aa22.88■■□□□ 1.25
GTF3A-204ENST00000438571 GPR25O00155 361 aa22.88■■□□□ 1.25
GTF3A-204ENST00000438571 MYO1BO43795 1136 aa22.88■■□□□ 1.25
GTF3A-204ENST00000438571 GJA5P36382 358 aa22.88■■□□□ 1.25
GTF3A-204ENST00000438571 SLFN5Q08AF3 891 aa22.88■■□□□ 1.25
GTF3A-204ENST00000438571 SREBF2Q12772 1141 aa22.88■■□□□ 1.25
GTF3A-204ENST00000438571 WNK4Q96J92 1243 aa22.88■■□□□ 1.25
GTF3A-204ENST00000438571 E9PSI1 815 aa22.87■■□□□ 1.25
GTF3A-204ENST00000438571 CHAF1AQ13111 956 aaPredicted RBP22.87■■□□□ 1.25
GTF3A-204ENST00000438571 SPDYE2Q495Y8 402 aa22.87■■□□□ 1.25
GTF3A-204ENST00000438571 METTL24Q5JXM2 366 aa22.87■■□□□ 1.25
GTF3A-204ENST00000438571 USP44Q9H0E7 712 aa22.87■■□□□ 1.25
GTF3A-204ENST00000438571 ZNF70Q9UC06 446 aaPredicted RBP22.87■■□□□ 1.25
GTF3A-204ENST00000438571 USP2O75604 605 aaPredicted RBP22.86■■□□□ 1.25
GTF3A-204ENST00000438571 FBXO33Q7Z6M2 555 aa22.86■■□□□ 1.25
GTF3A-204ENST00000438571 HPS5Q9UPZ3 1129 aa22.86■■□□□ 1.25
GTF3A-204ENST00000438571 ZSWIM8A7E2V4 1837 aa22.86■■□□□ 1.25
GTF3A-204ENST00000438571 IGF2BP3O00425 579 aaKnown RBP eCLIP22.85■■□□□ 1.25
GTF3A-204ENST00000438571 PPP1R12BO60237 982 aaPredicted RBP22.85■■□□□ 1.25
GTF3A-204ENST00000438571 CRKP46108 304 aa22.85■■□□□ 1.25
GTF3A-204ENST00000438571 SLC10A4Q96EP9 437 aa22.85■■□□□ 1.25
GTF3A-204ENST00000438571 DZIP1LQ8IYY4 767 aaKnown RBP22.84■■□□□ 1.25
GTF3A-204ENST00000438571 TEPSINQ96N21 525 aa22.84■■□□□ 1.25
GTF3A-204ENST00000438571 CFHR5Q9BXR6 569 aa22.84■■□□□ 1.25
GTF3A-204ENST00000438571 SERPINA10Q9UK55 444 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms