RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 BCL11AQ9H165 835 aa22.46■■□□□ 1.19
HDAC6-208ENST00000438518 FAM205AQ6ZU69 1335 aa22.46■■□□□ 1.19
HDAC6-208ENST00000438518 SCN9AQ15858 1988 aa22.45■■□□□ 1.18
HDAC6-208ENST00000438518 EIF6P56537 245 aaKnown RBP22.45■■□□□ 1.18
HDAC6-208ENST00000438518 FKBP1AP62942 108 aaKnown RBP22.45■■□□□ 1.18
HDAC6-208ENST00000438518 STRIP1Q5VSL9 837 aa22.45■■□□□ 1.18
HDAC6-208ENST00000438518 ZGPATQ8N5A5 531 aaKnown RBP22.45■■□□□ 1.18
HDAC6-208ENST00000438518 TBC1D22AQ8WUA7 517 aa22.45■■□□□ 1.18
HDAC6-208ENST00000438518 RASGRF1Q13972 1273 aa22.44■■□□□ 1.18
HDAC6-208ENST00000438518 C9orf131Q5VYM1 1079 aa22.44■■□□□ 1.18
HDAC6-208ENST00000438518 PLEKHM2Q8IWE5 1019 aa22.44■■□□□ 1.18
HDAC6-208ENST00000438518 SPATA5Q8NB90 893 aa22.44■■□□□ 1.18
HDAC6-208ENST00000438518 WDR66Q8TBY9 1149 aa22.44■■□□□ 1.18
HDAC6-208ENST00000438518 MYO3BQ8WXR4 1341 aa22.44■■□□□ 1.18
HDAC6-208ENST00000438518 SALL1Q9NSC2 1324 aa22.43■■□□□ 1.18
HDAC6-208ENST00000438518 USP17L3A6NCW0 530 aa22.43■■□□□ 1.18
HDAC6-208ENST00000438518 USP17L4A6NCW7 530 aa22.43■■□□□ 1.18
HDAC6-208ENST00000438518 PDE4AP27815 886 aa22.43■■□□□ 1.18
HDAC6-208ENST00000438518 MCAMP43121 646 aa22.43■■□□□ 1.18
HDAC6-208ENST00000438518 TNIP1Q15025 636 aa22.43■■□□□ 1.18
HDAC6-208ENST00000438518 USP17L1Q7RTZ2 530 aa22.43■■□□□ 1.18
HDAC6-208ENST00000438518 OTUD7AQ8TE49 926 aaPredicted RBP22.43■■□□□ 1.18
HDAC6-208ENST00000438518 YDJCA8MPS7 323 aa22.42■■□□□ 1.18
HDAC6-208ENST00000438518 TTLL5Q6EMB2 1281 aa22.42■■□□□ 1.18
HDAC6-208ENST00000438518 CIAPIN1Q6FI81 312 aa22.42■■□□□ 1.18
HDAC6-208ENST00000438518 PI4K2BQ8TCG2 481 aa22.42■■□□□ 1.18
HDAC6-208ENST00000438518 HAUS7Q99871 368 aa22.42■■□□□ 1.18
HDAC6-208ENST00000438518 HMG20BQ9P0W2 317 aa22.42■■□□□ 1.18
HDAC6-208ENST00000438518 UTRNP46939 3433 aa22.42■■□□□ 1.18
HDAC6-208ENST00000438518 COL1A1P02452 1464 aaPredicted RBP22.41■■□□□ 1.18
HDAC6-208ENST00000438518 DOCK2Q92608 1830 aa22.41■■□□□ 1.18
HDAC6-208ENST00000438518 TTF1Q15361 905 aaPredicted RBP22.41■■□□□ 1.18
HDAC6-208ENST00000438518 SUGT1Q9Y2Z0 365 aa22.41■■□□□ 1.18
HDAC6-208ENST00000438518 MAST2Q6P0Q8 1798 aa22.4■■□□□ 1.18
HDAC6-208ENST00000438518 MMP14P50281 582 aa22.4■■□□□ 1.18
HDAC6-208ENST00000438518 GTF2IP78347 998 aa22.4■■□□□ 1.18
HDAC6-208ENST00000438518 IQSEC3Q9UPP2 1182 aaPredicted RBP22.4■■□□□ 1.18
HDAC6-208ENST00000438518 VIL1P09327 827 aaKnown RBP22.39■■□□□ 1.17
HDAC6-208ENST00000438518 RPS12P25398 132 aaKnown RBP22.39■■□□□ 1.17
HDAC6-208ENST00000438518 CXCL9Q07325 125 aa22.39■■□□□ 1.17
HDAC6-208ENST00000438518 SCARF1Q14162 830 aa22.39■■□□□ 1.17
HDAC6-208ENST00000438518 DACT2Q5SW24 774 aa22.39■■□□□ 1.17
HDAC6-208ENST00000438518 TMED8Q6PL24 325 aaPredicted RBP22.39■■□□□ 1.17
HDAC6-208ENST00000438518 BOLA2Q9H3K6 86 aa22.39■■□□□ 1.17
HDAC6-208ENST00000438518 CHAF1AQ13111 956 aaPredicted RBP22.38■■□□□ 1.17
HDAC6-208ENST00000438518 SPTY2D1Q68D10 685 aaPredicted RBP22.38■■□□□ 1.17
HDAC6-208ENST00000438518 DPY19L2Q6NUT2 758 aa22.38■■□□□ 1.17
HDAC6-208ENST00000438518 TICAM2Q86XR7 235 aa22.38■■□□□ 1.17
HDAC6-208ENST00000438518 GPC2Q8N158 579 aa22.38■■□□□ 1.17
HDAC6-208ENST00000438518 AK9Q5TCS8 1911 aa22.37■■□□□ 1.17
HDAC6-208ENST00000438518 MFSD14BQ5SR56 506 aa22.37■■□□□ 1.17
HDAC6-208ENST00000438518 RSBN1LQ6PCB5 846 aaPredicted RBP22.37■■□□□ 1.17
HDAC6-208ENST00000438518 AGBL3Q8NEM8 1001 aa22.37■■□□□ 1.17
HDAC6-208ENST00000438518 PAG1Q9NWQ8 432 aa22.37■■□□□ 1.17
HDAC6-208ENST00000438518 MAST3O60307 1309 aa22.36■■□□□ 1.17
HDAC6-208ENST00000438518 MYH7P12883 1935 aa22.36■■□□□ 1.17
HDAC6-208ENST00000438518 PSMD14O00487 310 aa22.36■■□□□ 1.17
HDAC6-208ENST00000438518 RAD17O75943 681 aa22.36■■□□□ 1.17
HDAC6-208ENST00000438518 ZAP70P43403 619 aa22.36■■□□□ 1.17
HDAC6-208ENST00000438518 FBXW7Q969H0 707 aa22.36■■□□□ 1.17
HDAC6-208ENST00000438518 DNAJC2Q99543 621 aaKnown RBP22.36■■□□□ 1.17
HDAC6-208ENST00000438518 CYP2E1P05181 493 aaPredicted RBP22.35■■□□□ 1.17
HDAC6-208ENST00000438518 LRRFIP1Q32MZ4 808 aaKnown RBP22.35■■□□□ 1.17
HDAC6-208ENST00000438518 TTC22Q5TAA0 569 aa22.35■■□□□ 1.17
HDAC6-208ENST00000438518 TSHZ3Q63HK5 1081 aa22.35■■□□□ 1.17
HDAC6-208ENST00000438518 ZNF541Q9H0D2 1346 aa22.34■■□□□ 1.17
HDAC6-208ENST00000438518 PI16Q6UXB8 463 aa22.34■■□□□ 1.17
HDAC6-208ENST00000438518 CNTROBQ8N137 903 aa22.34■■□□□ 1.17
HDAC6-208ENST00000438518 DPF2Q92785 391 aa22.34■■□□□ 1.17
HDAC6-208ENST00000438518 EVI5LQ96CN4 794 aa22.34■■□□□ 1.17
HDAC6-208ENST00000438518 KCNQ5Q9NR82 932 aa22.34■■□□□ 1.17
HDAC6-208ENST00000438518 SNRKQ9NRH2 765 aa22.34■■□□□ 1.17
HDAC6-208ENST00000438518 RFX7Q2KHR2 1363 aa22.34■■□□□ 1.17
HDAC6-208ENST00000438518 GOLIM4O00461 696 aa22.33■■□□□ 1.17
HDAC6-208ENST00000438518 RGS3P49796 1198 aa22.33■■□□□ 1.17
HDAC6-208ENST00000438518 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.17
HDAC6-208ENST00000438518 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.33■■□□□ 1.177e-8■■■□□ 18.8
HDAC6-208ENST00000438518 ABCF2Q9UG63 623 aa22.33■■□□□ 1.17
HDAC6-208ENST00000438518 GLTPD2A6NH11 291 aa22.32■■□□□ 1.16
HDAC6-208ENST00000438518 LDHBP07195 334 aaKnown RBP22.32■■□□□ 1.16
HDAC6-208ENST00000438518 MAP3K12Q12852 859 aa22.32■■□□□ 1.16
HDAC6-208ENST00000438518 KBTBD3Q8NAB2 608 aa22.32■■□□□ 1.16
HDAC6-208ENST00000438518 LRP2BPQ9P2M1 347 aa22.32■■□□□ 1.16
HDAC6-208ENST00000438518 HDAC9Q9UKV0 1011 aa22.32■■□□□ 1.16
HDAC6-208ENST00000438518 MYO5AQ9Y4I1 1855 aaKnown RBP22.32■■□□□ 1.16
HDAC6-208ENST00000438518 WDR90Q96KV7 1748 aa22.31■■□□□ 1.16
HDAC6-208ENST00000438518 SCN4AP35499 1836 aa22.31■■□□□ 1.16
HDAC6-208ENST00000438518 HDLBPQ00341 1268 aaKnown RBP22.31■■□□□ 1.16
HDAC6-208ENST00000438518 BMP2KLQ5H9B9 411 aa22.31■■□□□ 1.16
HDAC6-208ENST00000438518 ZSCAN25Q6NSZ9 544 aa22.31■■□□□ 1.16
HDAC6-208ENST00000438518 SLF2Q8IX21 1173 aa22.31■■□□□ 1.16
HDAC6-208ENST00000438518 CERS5Q8N5B7 392 aa22.31■■□□□ 1.16
HDAC6-208ENST00000438518 GMLQ99445 158 aa22.31■■□□□ 1.16
HDAC6-208ENST00000438518 MRIQ9BWK5 157 aa22.31■■□□□ 1.16
HDAC6-208ENST00000438518 GJA3Q9Y6H8 435 aa22.31■■□□□ 1.16
HDAC6-208ENST00000438518 OGFOD1Q8N543 542 aa22.3■■□□□ 1.16
HDAC6-208ENST00000438518 L3MBTL3Q96JM7 780 aaPredicted RBP22.3■■□□□ 1.16
HDAC6-208ENST00000438518 JAG2Q9Y219 1238 aa22.3■■□□□ 1.16
HDAC6-208ENST00000438518 TRIM6-TRIM34B2RNG4 842 aa22.29■■□□□ 1.16
HDAC6-208ENST00000438518 PRDX5P30044 214 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms