RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
DDX56-205ENST00000433257 SKILP12757 684 aa17.21■□□□□ 0.35
DDX56-205ENST00000433257 U2AF2P26368 475 aaKnown RBP eCLIP17.21■□□□□ 0.351e-6■■■□□ 17.4
DDX56-205ENST00000433257 LRMPQ12912 555 aa17.21■□□□□ 0.35
DDX56-205ENST00000433257 STK3Q13188 491 aa17.21■□□□□ 0.35
DDX56-205ENST00000433257 FAM173BQ6P4H8 233 aa17.21■□□□□ 0.35
DDX56-205ENST00000433257 KRT222Q8N1A0 295 aa17.21■□□□□ 0.35
DDX56-205ENST00000433257 DHX16O60231 1041 aaKnown RBP17.2■□□□□ 0.34
DDX56-205ENST00000433257 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
DDX56-205ENST00000433257 ZNF589Q86UQ0 364 aaPredicted RBP17.2■□□□□ 0.34
DDX56-205ENST00000433257 KBTBD3Q8NAB2 608 aa17.2■□□□□ 0.34
DDX56-205ENST00000433257 PLSCR1O15162 318 aa17.2■□□□□ 0.34
DDX56-205ENST00000433257 SLU7O95391 586 aaKnown RBP17.2■□□□□ 0.34
DDX56-205ENST00000433257 ANXA1P04083 346 aa17.2■□□□□ 0.34
DDX56-205ENST00000433257 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
DDX56-205ENST00000433257 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
DDX56-205ENST00000433257 NSUN7Q8NE18 718 aaKnown RBP17.2■□□□□ 0.34
DDX56-205ENST00000433257 MRPS27Q92552 414 aaKnown RBP17.2■□□□□ 0.34
DDX56-205ENST00000433257 NRBP1Q9UHY1 535 aa17.2■□□□□ 0.34
DDX56-205ENST00000433257 SCN11AQ9UI33 1791 aa17.19■□□□□ 0.34
DDX56-205ENST00000433257 CCDC69A6NI79 296 aa17.19■□□□□ 0.34
DDX56-205ENST00000433257 EN1Q05925 392 aaPredicted RBP17.19■□□□□ 0.34
DDX56-205ENST00000433257 SCRN1Q12765 414 aa17.19■□□□□ 0.34
DDX56-205ENST00000433257 ADALQ6DHV7 355 aa17.19■□□□□ 0.34
DDX56-205ENST00000433257 CCAR2Q8N163 923 aaKnown RBP17.19■□□□□ 0.34
DDX56-205ENST00000433257 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
DDX56-205ENST00000433257 KCNG4Q8TDN1 519 aa17.19■□□□□ 0.34
DDX56-205ENST00000433257 PIGBQ92521 554 aa17.19■□□□□ 0.34
DDX56-205ENST00000433257 SBF2Q86WG5 1849 aa17.19■□□□□ 0.34
DDX56-205ENST00000433257 CCDC66A2RUB6 948 aa17.18■□□□□ 0.34
DDX56-205ENST00000433257 JAK2O60674 1132 aa17.18■□□□□ 0.34
DDX56-205ENST00000433257 YEATS4O95619 227 aa17.18■□□□□ 0.34
DDX56-205ENST00000433257 IGKV5-2P06315 115 aa17.18■□□□□ 0.34
DDX56-205ENST00000433257 ADD1P35611 737 aaKnown RBP17.18■□□□□ 0.34
DDX56-205ENST00000433257 TLR7Q9NYK1 1049 aaKnown RBP17.18■□□□□ 0.34
DDX56-205ENST00000433257 RTEL1Q9NZ71 1219 aa17.18■□□□□ 0.34
DDX56-205ENST00000433257 ZNF609O15014 1411 aa17.18■□□□□ 0.34
DDX56-205ENST00000433257 PTPDC1A2A3K4 754 aa17.17■□□□□ 0.34
DDX56-205ENST00000433257 CYP21A2P08686 494 aa17.17■□□□□ 0.34
DDX56-205ENST00000433257 PROSER3Q2NL68 480 aa17.17■□□□□ 0.34
DDX56-205ENST00000433257 CCDC144BQ3MJ40 725 aa17.17■□□□□ 0.34
DDX56-205ENST00000433257 BRAPQ7Z569 592 aa17.17■□□□□ 0.34
DDX56-205ENST00000433257 CCDC144CPQ8IYA2 1237 aa17.17■□□□□ 0.34
DDX56-205ENST00000433257 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.17■□□□□ 0.34
DDX56-205ENST00000433257 JARID2Q92833 1246 aaPredicted RBP17.17■□□□□ 0.34
DDX56-205ENST00000433257 SLC52A2Q9HAB3 445 aa17.17■□□□□ 0.34
DDX56-205ENST00000433257 AFDNP55196 1824 aaKnown RBP17.17■□□□□ 0.34
DDX56-205ENST00000433257 LAMA4Q16363 1823 aa17.17■□□□□ 0.34
DDX56-205ENST00000433257 KDM6AO15550 1401 aaPredicted RBP17.17■□□□□ 0.34
DDX56-205ENST00000433257 SALL1Q9NSC2 1324 aa17.17■□□□□ 0.34
DDX56-205ENST00000433257 TPM1P09493 284 aa17.16■□□□□ 0.34
DDX56-205ENST00000433257 EXOSC10Q01780 885 aaKnown RBP17.16■□□□□ 0.34
DDX56-205ENST00000433257 SNW1Q13573 536 aaKnown RBP17.16■□□□□ 0.34
DDX56-205ENST00000433257 PDIA6Q15084 440 aa17.16■□□□□ 0.34
DDX56-205ENST00000433257 FSIP1Q8NA03 581 aa17.16■□□□□ 0.34
DDX56-205ENST00000433257 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
DDX56-205ENST00000433257 TCEANC2Q96MN5 208 aa17.16■□□□□ 0.34
DDX56-205ENST00000433257 SRRTQ9BXP5 876 aaKnown RBP17.16■□□□□ 0.34
DDX56-205ENST00000433257 DBNLQ9UJU6 430 aaKnown RBP17.16■□□□□ 0.34
DDX56-205ENST00000433257 DOT1LQ8TEK3 1739 aa17.16■□□□□ 0.34
DDX56-205ENST00000433257 ME1P48163 572 aa17.16■□□□□ 0.34
DDX56-205ENST00000433257 RFX5P48382 616 aaPredicted RBP17.16■□□□□ 0.34
DDX56-205ENST00000433257 EVCP57679 992 aa17.16■□□□□ 0.34
DDX56-205ENST00000433257 CCZ1BP86790 482 aa17.16■□□□□ 0.34
DDX56-205ENST00000433257 CCZ1P86791 482 aaPredicted RBP17.16■□□□□ 0.34
DDX56-205ENST00000433257 EZH2Q15910 746 aaKnown RBP17.16■□□□□ 0.34
DDX56-205ENST00000433257 C11orf57Q6ZUT1 292 aaPredicted RBP17.16■□□□□ 0.34
DDX56-205ENST00000433257 DHX40Q8IX18 779 aaKnown RBP17.16■□□□□ 0.34
DDX56-205ENST00000433257 SIL1Q9H173 461 aa17.16■□□□□ 0.34
DDX56-205ENST00000433257 NHSQ6T4R5 1651 aa17.16■□□□□ 0.34
DDX56-205ENST00000433257 SPDYE4A6NLX3 237 aa17.15■□□□□ 0.34
DDX56-205ENST00000433257 CBFA2T2O43439 604 aa17.15■□□□□ 0.34
DDX56-205ENST00000433257 PTPN12Q05209 780 aaKnown RBP17.15■□□□□ 0.34
DDX56-205ENST00000433257 ZNF790Q6PG37 636 aa17.15■□□□□ 0.34
DDX56-205ENST00000433257 ANKRD13DQ6ZTN6 518 aa17.15■□□□□ 0.34
DDX56-205ENST00000433257 CAMKK2Q96RR4 588 aa17.15■□□□□ 0.34
DDX56-205ENST00000433257 POLR3EQ9NVU0 708 aa17.15■□□□□ 0.34
DDX56-205ENST00000433257 WDR19Q8NEZ3 1342 aa17.15■□□□□ 0.34
DDX56-205ENST00000433257 C5P01031 1676 aa17.14■□□□□ 0.34
DDX56-205ENST00000433257 FAM177BA6PVY3 158 aa17.14■□□□□ 0.33
DDX56-205ENST00000433257 BMS1Q14692 1282 aaKnown RBP17.14■□□□□ 0.33
DDX56-205ENST00000433257 ZNF771Q7L3S4 317 aaPredicted RBP17.14■□□□□ 0.33
DDX56-205ENST00000433257 TIGD1Q96MW7 591 aa17.14■□□□□ 0.33
DDX56-205ENST00000433257 SDF4Q9BRK5 362 aa17.14■□□□□ 0.33
DDX56-205ENST00000433257 ARGLU1Q9NWB6 273 aaPredicted RBP17.14■□□□□ 0.33
DDX56-205ENST00000433257 ZHX1Q9UKY1 873 aaPredicted RBP17.14■□□□□ 0.33
DDX56-205ENST00000433257 LAMB4A4D0S4 1761 aa17.14■□□□□ 0.33
DDX56-205ENST00000433257 IKBKBO14920 756 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 TFCP2Q12800 502 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
DDX56-205ENST00000433257 FCHSD1Q86WN1 690 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 FMR1NBQ8N0W7 255 aaPredicted RBP17.13■□□□□ 0.33
DDX56-205ENST00000433257 ZNF592Q92610 1267 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 DDX11Q96FC9 970 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 USP28Q96RU2 1077 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 MYD88Q99836 296 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 L2HGDHQ9H9P8 463 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 FAM53CQ9NYF3 392 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
DDX56-205ENST00000433257 SF3A1Q15459 793 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms