RNA–Protein interactions for RNA: ENST00000429586.6

ABCF3-203, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCF3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-203ENST00000429586 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.26■□□□□ 0.83
ABCF3-203ENST00000429586 ANKRD31Q8N7Z5 1873 aa20.25■□□□□ 0.83
ABCF3-203ENST00000429586 MYH7P12883 1935 aa20.25■□□□□ 0.83
ABCF3-203ENST00000429586 MMP10P09238 476 aa20.25■□□□□ 0.83
ABCF3-203ENST00000429586 NLGN1Q8N2Q7 840 aa20.25■□□□□ 0.83
ABCF3-203ENST00000429586 RPGRQ92834 1020 aaKnown RBP20.25■□□□□ 0.83
ABCF3-203ENST00000429586 SLC15A2Q16348 729 aa20.24■□□□□ 0.83
ABCF3-203ENST00000429586 MED23Q9ULK4 1368 aa20.24■□□□□ 0.83
ABCF3-203ENST00000429586 MCCP23508 829 aa20.24■□□□□ 0.83
ABCF3-203ENST00000429586 KLRK1P26718 216 aa20.24■□□□□ 0.83
ABCF3-203ENST00000429586 GYG1P46976 350 aa20.24■□□□□ 0.83
ABCF3-203ENST00000429586 SF3B2Q13435 895 aaKnown RBP20.24■□□□□ 0.83
ABCF3-203ENST00000429586 CYP2E1P05181 493 aaPredicted RBP20.23■□□□□ 0.83
ABCF3-203ENST00000429586 RASGRF1Q13972 1273 aa20.23■□□□□ 0.83
ABCF3-203ENST00000429586 PPP4R3BQ5MIZ7 849 aa20.23■□□□□ 0.83
ABCF3-203ENST00000429586 FLAD1Q8NFF5 587 aa20.23■□□□□ 0.83
ABCF3-203ENST00000429586 DDX49Q9Y6V7 483 aaKnown RBP20.23■□□□□ 0.83
ABCF3-203ENST00000429586 CCDC171Q6TFL3 1326 aa20.23■□□□□ 0.83
ABCF3-203ENST00000429586 ARID4AP29374 1257 aaPredicted RBP20.23■□□□□ 0.83
ABCF3-203ENST00000429586 PDGFDQ9GZP0 370 aaPredicted RBP20.23■□□□□ 0.83
ABCF3-203ENST00000429586 HMG20BQ9P0W2 317 aa20.23■□□□□ 0.83
ABCF3-203ENST00000429586 HSPA4P34932 840 aa20.23■□□□□ 0.83
ABCF3-203ENST00000429586 GRAPQ13588 217 aa20.22■□□□□ 0.83
ABCF3-203ENST00000429586 RABEP1Q15276 862 aa20.22■□□□□ 0.83
ABCF3-203ENST00000429586 GRAPLQ8TC17 118 aaPredicted RBP20.22■□□□□ 0.83
ABCF3-203ENST00000429586 PIH1D3Q9NQM4 214 aaKnown RBP20.22■□□□□ 0.83
ABCF3-203ENST00000429586 STK32BQ9NY57 414 aa20.22■□□□□ 0.83
ABCF3-203ENST00000429586 BAG6P46379 1132 aa20.22■□□□□ 0.83
ABCF3-203ENST00000429586 KCNJ4P48050 445 aa20.22■□□□□ 0.83
ABCF3-203ENST00000429586 RASEFQ8IZ41 740 aa20.22■□□□□ 0.83
ABCF3-203ENST00000429586 RFX7Q2KHR2 1363 aa20.21■□□□□ 0.83
ABCF3-203ENST00000429586 UQCRFS1P1P0C7P4 283 aa20.21■□□□□ 0.83
ABCF3-203ENST00000429586 CRY2Q49AN0 593 aa20.21■□□□□ 0.83
ABCF3-203ENST00000429586 PRPF40BQ6NWY9 871 aaKnown RBP20.21■□□□□ 0.83
ABCF3-203ENST00000429586 TULP1O00294 542 aaPredicted RBP20.21■□□□□ 0.83
ABCF3-203ENST00000429586 RNF113AO15541 343 aaKnown RBP20.21■□□□□ 0.83
ABCF3-203ENST00000429586 SPATA5Q8NB90 893 aa20.21■□□□□ 0.83
ABCF3-203ENST00000429586 ZNF512BQ96KM6 892 aaPredicted RBP20.21■□□□□ 0.83
ABCF3-203ENST00000429586 LETM1O95202 739 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-203ENST00000429586 MCMDC2Q4G0Z9 681 aa20.2■□□□□ 0.82
ABCF3-203ENST00000429586 UPF3BQ9BZI7 483 aaKnown RBP20.2■□□□□ 0.82
ABCF3-203ENST00000429586 RBM8AQ9Y5S9 174 aaKnown RBP20.2■□□□□ 0.82
ABCF3-203ENST00000429586 IDH1O75874 414 aaKnown RBP20.2■□□□□ 0.82
ABCF3-203ENST00000429586 UBE4AQ14139 1066 aa20.2■□□□□ 0.82
ABCF3-203ENST00000429586 SNX14Q9Y5W7 946 aa20.2■□□□□ 0.82
ABCF3-203ENST00000429586 PARP3Q9Y6F1 533 aa20.2■□□□□ 0.82
ABCF3-203ENST00000429586 WASHC4Q2M389 1173 aa20.19■□□□□ 0.82
ABCF3-203ENST00000429586 RBSNQ9H1K0 784 aa20.19■□□□□ 0.82
ABCF3-203ENST00000429586 NRXN2Q9P2S2 1712 aa20.19■□□□□ 0.82
ABCF3-203ENST00000429586 MAST3O60307 1309 aa20.19■□□□□ 0.82
ABCF3-203ENST00000429586 M0R2C6 588 aa20.19■□□□□ 0.82
ABCF3-203ENST00000429586 BAG4O95429 457 aaKnown RBP20.19■□□□□ 0.82
ABCF3-203ENST00000429586 ZMYM1Q5SVZ6 1142 aa20.19■□□□□ 0.82
ABCF3-203ENST00000429586 VPS53Q5VIR6 699 aa20.19■□□□□ 0.82
ABCF3-203ENST00000429586 OSBP2Q969R2 916 aa20.19■□□□□ 0.82
ABCF3-203ENST00000429586 GPR101Q96P66 508 aaPredicted RBP20.19■□□□□ 0.82
ABCF3-203ENST00000429586 ANKIB1Q9P2G1 1089 aa20.19■□□□□ 0.82
ABCF3-203ENST00000429586 NEK4P51957 841 aa20.18■□□□□ 0.82
ABCF3-203ENST00000429586 MAP4K1Q92918 833 aa20.18■□□□□ 0.82
ABCF3-203ENST00000429586 TXNRD3Q86VQ6 643 aa20.18■□□□□ 0.82
ABCF3-203ENST00000429586 CCDC39Q9UFE4 941 aa20.18■□□□□ 0.82
ABCF3-203ENST00000429586 VPS37DQ86XT2 251 aa20.17■□□□□ 0.82
ABCF3-203ENST00000429586 MYRIPQ8NFW9 859 aa20.17■□□□□ 0.82
ABCF3-203ENST00000429586 RBM17Q96I25 401 aaKnown RBP20.17■□□□□ 0.82
ABCF3-203ENST00000429586 FAM84BQ96KN1 310 aaPredicted RBP20.17■□□□□ 0.82
ABCF3-203ENST00000429586 ANKRD2Q9GZV1 360 aa20.17■□□□□ 0.82
ABCF3-203ENST00000429586 TAF6LQ9Y6J9 622 aa20.17■□□□□ 0.82
ABCF3-203ENST00000429586 CACNA1SQ13698 1873 aa20.17■□□□□ 0.82
ABCF3-203ENST00000429586 FOXD4L1Q9NU39 408 aa20.17■□□□□ 0.82
ABCF3-203ENST00000429586 WWC3Q9ULE0 1092 aa20.17■□□□□ 0.82
ABCF3-203ENST00000429586 COL11A2P13942 1736 aaPredicted RBP20.17■□□□□ 0.82
ABCF3-203ENST00000429586 MYH13Q9UKX3 1938 aa20.16■□□□□ 0.82
ABCF3-203ENST00000429586 ZNF804BA4D1E1 1349 aa20.16■□□□□ 0.82
ABCF3-203ENST00000429586 ANAPC15P60006 121 aa20.16■□□□□ 0.82
ABCF3-203ENST00000429586 NECTIN1Q15223 517 aa20.16■□□□□ 0.82
ABCF3-203ENST00000429586 ZSCAN23Q3MJ62 389 aa20.16■□□□□ 0.82
ABCF3-203ENST00000429586 SLC9C2Q5TAH2 1124 aa20.16■□□□□ 0.82
ABCF3-203ENST00000429586 COL1A1P02452 1464 aaPredicted RBP20.16■□□□□ 0.82
ABCF3-203ENST00000429586 EPB41L2O43491 1005 aaKnown RBP20.16■□□□□ 0.82
ABCF3-203ENST00000429586 CPA1P15085 419 aa20.16■□□□□ 0.82
ABCF3-203ENST00000429586 CAVIN4Q5BKX8 364 aa20.16■□□□□ 0.82
ABCF3-203ENST00000429586 NOL8Q76FK4 1167 aaKnown RBP20.16■□□□□ 0.82
ABCF3-203ENST00000429586 PUS7LQ9H0K6 701 aaKnown RBP20.16■□□□□ 0.82
ABCF3-203ENST00000429586 HELLSQ9NRZ9 838 aa20.16■□□□□ 0.82
ABCF3-203ENST00000429586 DOCK2Q92608 1830 aa20.15■□□□□ 0.82
ABCF3-203ENST00000429586 CREB3L3Q68CJ9 461 aa20.15■□□□□ 0.82
ABCF3-203ENST00000429586 BRIP1Q9BX63 1249 aa20.15■□□□□ 0.82
ABCF3-203ENST00000429586 K7ELQ4 463 aaPredicted RBP20.15■□□□□ 0.82
ABCF3-203ENST00000429586 TTF1Q15361 905 aaPredicted RBP20.15■□□□□ 0.82
ABCF3-203ENST00000429586 ADCK5Q3MIX3 580 aa20.15■□□□□ 0.82
ABCF3-203ENST00000429586 GPSM2P81274 684 aa20.14■□□□□ 0.82
ABCF3-203ENST00000429586 ILDR1Q86SU0 546 aaPredicted RBP20.14■□□□□ 0.82
ABCF3-203ENST00000429586 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.14■□□□□ 0.821e-6■■■■■ 48.8
ABCF3-203ENST00000429586 NSFL1CQ9UNZ2 370 aaKnown RBP20.14■□□□□ 0.82
ABCF3-203ENST00000429586 COL9A3Q14050 684 aaPredicted RBP20.14■□□□□ 0.81
ABCF3-203ENST00000429586 JAG2Q9Y219 1238 aa20.14■□□□□ 0.81
ABCF3-203ENST00000429586 QSER1Q2KHR3 1735 aa20.13■□□□□ 0.81
ABCF3-203ENST00000429586 KLRG2A4D1S0 409 aaPredicted RBP20.13■□□□□ 0.81
ABCF3-203ENST00000429586 SLC27A2O14975 620 aa20.13■□□□□ 0.81
ABCF3-203ENST00000429586 ADD2P35612 726 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms