RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 GJC1P36383 396 aa11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 LARP6Q9BRS8 491 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 NAA15Q9BXJ9 866 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-202ENST00000427926 EEF2P13639 858 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 EIF4A2Q14240 407 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 FCHSD1Q86WN1 690 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 HACE1Q8IYU2 909 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 LINS1Q8NG48 757 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 BRF1Q92994 677 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 TBX22Q9Y458 520 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 HCLS1P14317 486 aaPredicted RBP11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 RRAGBQ5VZM2 374 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 PAGR1Q9BTK6 254 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 BIN1O00499 593 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 DKC1O60832 514 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■■■■□ 22.2
CLTCL1-202ENST00000427926 GBP3Q9H0R5 595 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 SPECC1Q5M775 1068 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 C2CD5Q86YS7 1000 aa11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 ABT1Q9ULW3 272 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-202ENST00000427926 DNM2P50570 870 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 NSMFQ6X4W1 530 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 CPXCR1Q8N123 301 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 PROCA1Q8NCQ7 364 aaPredicted RBP11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 IP6K1Q92551 441 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 DDX12PQ92771 950 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 IL16Q14005 1332 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 GJB2P29033 226 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 SNX16P57768 344 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 RBM10P98175 930 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 CHST3Q7LGC8 479 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 WDR66Q8TBY9 1149 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 YTHDC2Q9H6S0 1430 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 RNMTO43148 476 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 SH3BP5O60239 455 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 HLTFQ14527 1009 aaKnown RBP eCLIP11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 C20orf194Q5TEA3 1177 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 CERS3Q8IU89 383 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 IFT74Q96LB3 600 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 FNBP1Q96RU3 617 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 KIAA0753Q2KHM9 967 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 MTHFSDQ2M296 383 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 CCDC24Q8N4L8 307 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 ABCC10Q5T3U5 1492 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 NR1I2O75469 434 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 SMTNP53814 917 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 TSHZ3Q63HK5 1081 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.28□□□□□ -0.6
CLTCL1-202ENST00000427926 AKR1B10O60218 316 aa11.27□□□□□ -0.6
CLTCL1-202ENST00000427926 TRIM27P14373 513 aa11.27□□□□□ -0.6
CLTCL1-202ENST00000427926 AFMP43652 599 aa11.27□□□□□ -0.6
CLTCL1-202ENST00000427926 TCP10Q12799 353 aa11.27□□□□□ -0.6
CLTCL1-202ENST00000427926 BIRC3Q13489 604 aa11.27□□□□□ -0.6
CLTCL1-202ENST00000427926 FAM89AQ96GI7 184 aa11.27□□□□□ -0.6
CLTCL1-202ENST00000427926 RNF113AO15541 343 aaKnown RBP11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 CASQ1P31415 396 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 ORAI2Q96SN7 254 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 HAUS7Q99871 368 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 HOXC9P31274 260 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 STRN3Q13033 797 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 MAP9Q49MG5 647 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 GADL1Q6ZQY3 521 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 SHANK2Q9UPX8 1470 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 CHMP2AO43633 222 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 ITGA6P23229 1130 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 CDAN1Q8IWY9 1227 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 BCCIPQ9P287 314 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 CFAP43Q8NDM7 1665 aa11.27□□□□□ -0.61
CLTCL1-202ENST00000427926 EIF2AK4Q9P2K8 1649 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 PDE8AO60658 829 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 MCM3P25205 808 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 MCM4P33991 863 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 GRPEL1Q9HAV7 217 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 UQCRHLA0A096LP55 91 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 CCDC169A6NNP5 214 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 N4BP3O15049 544 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 GAS8O95995 478 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 CNKSR1Q969H4 720 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 TARBP1Q13395 1621 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 UBXN4Q92575 508 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 LRRC2Q9BYS8 371 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 PSMA7O14818 248 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 KRT2P35908 639 aa11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 IQCGQ9H095 443 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 TFIP11Q9UBB9 837 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-202ENST00000427926 PRPHP41219 470 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 PUM3Q15397 648 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 CWF19L2Q2TBE0 894 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 CCDC183Q5T5S1 534 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 DDX19AQ9NUU7 478 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 PLCB3Q01970 1234 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 WDR44Q5JSH3 913 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 TRPC3Q13507 836 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 FNBP4Q8N3X1 1017 aaPredicted RBP11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 TBC1D22AQ8WUA7 517 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 PUS7Q96PZ0 661 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms