RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CREBZFQ9NS37 354 aa27.72■■■□□ 2.03
PTCHD3P2-201ENST00000424937 IQSEC3Q9UPP2 1182 aaPredicted RBP27.72■■■□□ 2.03
PTCHD3P2-201ENST00000424937 SASH1O94885 1247 aa27.71■■■□□ 2.03
PTCHD3P2-201ENST00000424937 GGA3Q9NZ52 723 aa27.71■■■□□ 2.03
PTCHD3P2-201ENST00000424937 COG6Q9Y2V7 657 aa27.71■■■□□ 2.03
PTCHD3P2-201ENST00000424937 ASTN2O75129 1339 aaPredicted RBP27.7■■■□□ 2.03
PTCHD3P2-201ENST00000424937 FAM205AQ6ZU69 1335 aa27.7■■■□□ 2.03
PTCHD3P2-201ENST00000424937 BCAMP50895 628 aa27.7■■■□□ 2.02
PTCHD3P2-201ENST00000424937 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.7■■■□□ 2.02
PTCHD3P2-201ENST00000424937 HDAC9Q9UKV0 1011 aa27.7■■■□□ 2.02
PTCHD3P2-201ENST00000424937 TMEM88BA6NKF7 163 aa27.69■■■□□ 2.02
PTCHD3P2-201ENST00000424937 FRAT2O75474 233 aaPredicted RBP27.69■■■□□ 2.02
PTCHD3P2-201ENST00000424937 FKBP1AP62942 108 aaKnown RBP27.69■■■□□ 2.02
PTCHD3P2-201ENST00000424937 CDC37L1Q7L3B6 337 aa27.69■■■□□ 2.02
PTCHD3P2-201ENST00000424937 DCPSQ96C86 337 aaKnown RBP27.69■■■□□ 2.02
PTCHD3P2-201ENST00000424937 F8W031 263 aaPredicted RBP27.68■■■□□ 2.02
PTCHD3P2-201ENST00000424937 ATP8B2P98198 1209 aa27.68■■■□□ 2.02
PTCHD3P2-201ENST00000424937 CHAF1AQ13111 956 aaPredicted RBP27.68■■■□□ 2.02
PTCHD3P2-201ENST00000424937 SCARF1Q14162 830 aa27.68■■■□□ 2.02
PTCHD3P2-201ENST00000424937 POLA2Q14181 598 aa27.68■■■□□ 2.02
PTCHD3P2-201ENST00000424937 TFCP2Q12800 502 aa27.67■■■□□ 2.02
PTCHD3P2-201ENST00000424937 MFSD14BQ5SR56 506 aa27.67■■■□□ 2.02
PTCHD3P2-201ENST00000424937 KRT26Q7Z3Y9 468 aa27.67■■■□□ 2.02
PTCHD3P2-201ENST00000424937 USP48Q86UV5 1035 aa27.67■■■□□ 2.02
PTCHD3P2-201ENST00000424937 DNAJC5GQ8N7S2 189 aa27.67■■■□□ 2.02
PTCHD3P2-201ENST00000424937 DDX19BQ9UMR2 479 aa27.67■■■□□ 2.02
PTCHD3P2-201ENST00000424937 MMP14P50281 582 aa27.66■■■□□ 2.02
PTCHD3P2-201ENST00000424937 G3BP1Q13283 466 aaKnown RBP eCLIP27.66■■■□□ 2.02
PTCHD3P2-201ENST00000424937 ANGEL2Q5VTE6 544 aaKnown RBP27.66■■■□□ 2.02
PTCHD3P2-201ENST00000424937 SSH3Q8TE77 659 aa27.66■■■□□ 2.02
PTCHD3P2-201ENST00000424937 ADM5C9JUS6 153 aa27.65■■■□□ 2.02
PTCHD3P2-201ENST00000424937 NBPF9Q3BBW0 867 aa27.65■■■□□ 2.02
PTCHD3P2-201ENST00000424937 C20orf194Q5TEA3 1177 aa27.65■■■□□ 2.02
PTCHD3P2-201ENST00000424937 KLRG1Q96E93 195 aa27.65■■■□□ 2.02
PTCHD3P2-201ENST00000424937 WNT10BO00744 389 aa27.64■■■□□ 2.02
PTCHD3P2-201ENST00000424937 CEP85Q6P2H3 762 aa27.64■■■□□ 2.02
PTCHD3P2-201ENST00000424937 SULF1Q8IWU6 871 aa27.64■■■□□ 2.02
PTCHD3P2-201ENST00000424937 ZNF408Q9H9D4 720 aa27.64■■■□□ 2.02
PTCHD3P2-201ENST00000424937 COL1A1P02452 1464 aaPredicted RBP27.64■■■□□ 2.01
PTCHD3P2-201ENST00000424937 CELF2O95319 508 aaKnown RBP27.63■■■□□ 2.01
PTCHD3P2-201ENST00000424937 ADORA1P30542 326 aa27.63■■■□□ 2.01
PTCHD3P2-201ENST00000424937 ABT1Q9ULW3 272 aaKnown RBP27.63■■■□□ 2.01
PTCHD3P2-201ENST00000424937 AKAP2Q9Y2D5 859 aa27.63■■■□□ 2.01
PTCHD3P2-201ENST00000424937 OS9Q13438 667 aaPredicted RBP27.62■■■□□ 2.01
PTCHD3P2-201ENST00000424937 PDE3AQ14432 1141 aa27.62■■■□□ 2.01
PTCHD3P2-201ENST00000424937 DLK2Q6UY11 383 aa27.62■■■□□ 2.01
PTCHD3P2-201ENST00000424937 MKRN1Q9UHC7 482 aaKnown RBP27.62■■■□□ 2.01
PTCHD3P2-201ENST00000424937 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.62■■■□□ 2.01
PTCHD3P2-201ENST00000424937 PITPNM2Q9BZ72 1349 aa27.62■■■□□ 2.01
PTCHD3P2-201ENST00000424937 A0A1B0GUL7 405 aa27.61■■■□□ 2.01
PTCHD3P2-201ENST00000424937 DLGAP5Q15398 846 aa27.61■■■□□ 2.01
PTCHD3P2-201ENST00000424937 CST9Q5W186 159 aa27.61■■■□□ 2.01
PTCHD3P2-201ENST00000424937 TBC1D22AQ8WUA7 517 aa27.61■■■□□ 2.01
PTCHD3P2-201ENST00000424937 TTF2Q9UNY4 1162 aaKnown RBP27.61■■■□□ 2.01
PTCHD3P2-201ENST00000424937 SURF6O75683 361 aaKnown RBP27.6■■■□□ 2.01
PTCHD3P2-201ENST00000424937 PHKA1P46020 1223 aa27.6■■■□□ 2.01
PTCHD3P2-201ENST00000424937 TIMM10P62072 90 aa27.6■■■□□ 2.01
PTCHD3P2-201ENST00000424937 GNL3LQ9NVN8 582 aaKnown RBP27.6■■■□□ 2.01
PTCHD3P2-201ENST00000424937 CNTNAP1P78357 1384 aa27.6■■■□□ 2.01
PTCHD3P2-201ENST00000424937 CFAP100Q494V2 611 aa27.59■■■□□ 2.01
PTCHD3P2-201ENST00000424937 ZBED3Q96IU2 234 aaPredicted RBP27.59■■■□□ 2.01
PTCHD3P2-201ENST00000424937 CHMP4BQ9H444 224 aaKnown RBP27.59■■■□□ 2.01
PTCHD3P2-201ENST00000424937 ZBTB40Q9NUA8 1239 aa27.59■■■□□ 2.01
PTCHD3P2-201ENST00000424937 SCAF8Q9UPN6 1271 aaKnown RBP27.59■■■□□ 2.01
PTCHD3P2-201ENST00000424937 RBM5P52756 815 aaKnown RBP eCLIP27.58■■■□□ 2.01
PTCHD3P2-201ENST00000424937 GRIK5Q16478 980 aa27.58■■■□□ 2.01
PTCHD3P2-201ENST00000424937 CCDC102BQ68D86 513 aa27.58■■■□□ 2.01
PTCHD3P2-201ENST00000424937 XAGE2Q96GT9 111 aa27.58■■■□□ 2.01
PTCHD3P2-201ENST00000424937 NEUROD6Q96NK8 337 aa27.58■■■□□ 2.01
PTCHD3P2-201ENST00000424937 PCDHAC2Q9Y5I4 1007 aa27.58■■■□□ 2.01
PTCHD3P2-201ENST00000424937 MTMR14Q8NCE2 650 aa27.57■■■□□ 2
PTCHD3P2-201ENST00000424937 CDCA5Q96FF9 252 aa27.56■■■□□ 2
PTCHD3P2-201ENST00000424937 NOP58Q9Y2X3 529 aaKnown RBP27.56■■■□□ 2
PTCHD3P2-201ENST00000424937 SPDYE2BA6NHP3 402 aa27.55■■■□□ 2
PTCHD3P2-201ENST00000424937 SPDYE6P0CI01 402 aa27.55■■■□□ 2
PTCHD3P2-201ENST00000424937 WDR66Q8TBY9 1149 aa27.55■■■□□ 2
PTCHD3P2-201ENST00000424937 SERPINA10Q9UK55 444 aa27.55■■■□□ 2
PTCHD3P2-201ENST00000424937 RASSF10A6NK89 507 aa27.54■■■□□ 2
PTCHD3P2-201ENST00000424937 SEMA3EO15041 775 aa27.54■■■□□ 2
PTCHD3P2-201ENST00000424937 APOBEC3FQ8IUX4 373 aaKnown RBP27.54■■■□□ 2
PTCHD3P2-201ENST00000424937 DENND2AQ9ULE3 1009 aa27.54■■■□□ 2
PTCHD3P2-201ENST00000424937 TLL2Q9Y6L7 1015 aa27.54■■■□□ 2
PTCHD3P2-201ENST00000424937 MYO1BO43795 1136 aa27.53■■■□□ 2
PTCHD3P2-201ENST00000424937 RRP1P56182 461 aaKnown RBP27.53■■■□□ 2
PTCHD3P2-201ENST00000424937 DEFB115Q30KQ5 88 aa27.53■■■□□ 2
PTCHD3P2-201ENST00000424937 GORABQ5T7V8 394 aa27.53■■■□□ 2
PTCHD3P2-201ENST00000424937 PRMT6Q96LA8 375 aaPredicted RBP27.53■■■□□ 2
PTCHD3P2-201ENST00000424937 EXOC6BQ9Y2D4 811 aa27.53■■■□□ 2
PTCHD3P2-201ENST00000424937 MYH2Q9UKX2 1941 aa27.53■■■□□ 2
PTCHD3P2-201ENST00000424937 MAST3O60307 1309 aa27.52■■■□□ 2
PTCHD3P2-201ENST00000424937 AOX1Q06278 1338 aa27.52■■■□□ 2
PTCHD3P2-201ENST00000424937 CLRN2A0PK11 232 aa27.52■■■□□ 2
PTCHD3P2-201ENST00000424937 CRKP46108 304 aa27.52■■■□□ 2
PTCHD3P2-201ENST00000424937 RASGRF1Q13972 1273 aa27.52■■■□□ 2
PTCHD3P2-201ENST00000424937 TNNI3KQ59H18 835 aa27.52■■■□□ 2
PTCHD3P2-201ENST00000424937 PAXIP1Q6ZW49 1069 aaPredicted RBP27.52■■■□□ 2
PTCHD3P2-201ENST00000424937 RPAP2Q8IXW5 612 aaPredicted RBP27.52■■■□□ 2
PTCHD3P2-201ENST00000424937 GPR108Q9NPR9 543 aa27.52■■■□□ 2
PTCHD3P2-201ENST00000424937 SUGT1Q9Y2Z0 365 aa27.52■■■□□ 2
PTCHD3P2-201ENST00000424937 FPGT-TNNI3KV9GXZ4 949 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms