RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 FOXD4L3Q6VB84 417 aaPredicted RBP4.99□□□□□ -1.61
APP-207ENST00000415997 NBPF11Q86T75 865 aa4.99□□□□□ -1.61
APP-207ENST00000415997 BHMTQ93088 406 aa4.99□□□□□ -1.61
APP-207ENST00000415997 HSH2DQ96JZ2 352 aa4.99□□□□□ -1.61
APP-207ENST00000415997 NACC1Q96RE7 527 aa4.99□□□□□ -1.61
APP-207ENST00000415997 SLC52A1Q9NWF4 448 aa4.99□□□□□ -1.61
APP-207ENST00000415997 ADCY9O60503 1353 aa4.99□□□□□ -1.61
APP-207ENST00000415997 NRXN3Q9Y4C0 1643 aa4.98□□□□□ -1.61
APP-207ENST00000415997 NRAPQ86VF7 1730 aa4.98□□□□□ -1.61
APP-207ENST00000415997 ADARB2-AS1A8MUL3 147 aa4.98□□□□□ -1.61
APP-207ENST00000415997 EML1O00423 815 aa4.98□□□□□ -1.61
APP-207ENST00000415997 TRIM37O94972 964 aa4.98□□□□□ -1.61
APP-207ENST00000415997 PRSS36Q5K4E3 855 aa4.98□□□□□ -1.61
APP-207ENST00000415997 NUDT8Q8WV74 236 aa4.98□□□□□ -1.61
APP-207ENST00000415997 ZFP64Q9NPA5 681 aa4.98□□□□□ -1.61
APP-207ENST00000415997 BRD7Q9NPI1 651 aa4.98□□□□□ -1.61
APP-207ENST00000415997 CHMP3Q9Y3E7 222 aa4.98□□□□□ -1.61
APP-207ENST00000415997 AATKQ6ZMQ8 1374 aa4.98□□□□□ -1.61
APP-207ENST00000415997 FYCO1Q9BQS8 1478 aa4.98□□□□□ -1.61
APP-207ENST00000415997 RGPD3A6NKT7 1758 aaPredicted RBP4.97□□□□□ -1.61
APP-207ENST00000415997 RGPD4Q7Z3J3 1758 aa4.97□□□□□ -1.61
APP-207ENST00000415997 FAM196AQ6ZSG2 479 aa4.97□□□□□ -1.61
APP-207ENST00000415997 ZNF280CQ8ND82 737 aa4.97□□□□□ -1.61
APP-207ENST00000415997 TPCN2Q8NHX9 752 aa4.97□□□□□ -1.61
APP-207ENST00000415997 UBE2OQ9C0C9 1292 aaKnown RBP4.97□□□□□ -1.61
APP-207ENST00000415997 PHACTR1Q9C0D0 580 aa4.97□□□□□ -1.61
APP-207ENST00000415997 WWC3Q9ULE0 1092 aa4.97□□□□□ -1.61
APP-207ENST00000415997 KCNH4Q9UQ05 1017 aa4.97□□□□□ -1.61
APP-207ENST00000415997 DUOX2Q9NRD8 1548 aa4.97□□□□□ -1.61
APP-207ENST00000415997 PRAG1Q86YV5 1406 aa4.97□□□□□ -1.61
APP-207ENST00000415997 NPHP3Q7Z494 1330 aa4.97□□□□□ -1.61
APP-207ENST00000415997 METP08581 1390 aa4.96□□□□□ -1.62
APP-207ENST00000415997 MYO5BQ9ULV0 1848 aa4.96□□□□□ -1.62
APP-207ENST00000415997 USP17L5A8MUK1 530 aa4.96□□□□□ -1.62
APP-207ENST00000415997 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
APP-207ENST00000415997 LILRB5O75023 590 aa4.96□□□□□ -1.62
APP-207ENST00000415997 ZBTB7AO95365 584 aa4.96□□□□□ -1.62
APP-207ENST00000415997 COL9A3Q14050 684 aaPredicted RBP4.96□□□□□ -1.62
APP-207ENST00000415997 TPRNQ4KMQ1 711 aa4.96□□□□□ -1.62
APP-207ENST00000415997 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.96□□□□□ -1.62
APP-207ENST00000415997 TNFRSF25Q93038 417 aa4.96□□□□□ -1.62
APP-207ENST00000415997 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
APP-207ENST00000415997 TSPAN10Q9H1Z9 355 aaPredicted RBP4.96□□□□□ -1.62
APP-207ENST00000415997 JPH1Q9HDC5 661 aaPredicted RBP4.96□□□□□ -1.62
APP-207ENST00000415997 ANKIB1Q9P2G1 1089 aa4.96□□□□□ -1.62
APP-207ENST00000415997 EEA1Q15075 1411 aa4.96□□□□□ -1.62
APP-207ENST00000415997 CEP162Q5TB80 1403 aa4.96□□□□□ -1.62
APP-207ENST00000415997 SPATA31A5Q5VU36 1347 aa4.96□□□□□ -1.62
APP-207ENST00000415997 SPATA31A3Q5VYP0 1347 aa4.96□□□□□ -1.62
APP-207ENST00000415997 SPATA31A7Q8IWB4 1347 aa4.96□□□□□ -1.62
APP-207ENST00000415997 C9orf172C9J069 976 aa4.95□□□□□ -1.62
APP-207ENST00000415997 LZTS3O60299 673 aaPredicted RBP4.95□□□□□ -1.62
APP-207ENST00000415997 NID1P14543 1247 aa4.95□□□□□ -1.62
APP-207ENST00000415997 EPHA4P54764 986 aa4.95□□□□□ -1.62
APP-207ENST00000415997 ARTNQ5T4W7 220 aa4.95□□□□□ -1.62
APP-207ENST00000415997 CCDC102BQ68D86 513 aa4.95□□□□□ -1.62
APP-207ENST00000415997 SHISA2Q6UWI4 295 aa4.95□□□□□ -1.62
APP-207ENST00000415997 TRIM50Q86XT4 487 aa4.95□□□□□ -1.62
APP-207ENST00000415997 WWC1Q8IX03 1113 aa4.95□□□□□ -1.62
APP-207ENST00000415997 C7orf43Q8WVR3 580 aa4.95□□□□□ -1.62
APP-207ENST00000415997 SUSD3Q96L08 255 aa4.95□□□□□ -1.62
APP-207ENST00000415997 MDFIQ99750 246 aa4.95□□□□□ -1.62
APP-207ENST00000415997 ALG2Q9H553 416 aa4.95□□□□□ -1.62
APP-207ENST00000415997 COG6Q9Y2V7 657 aa4.95□□□□□ -1.62
APP-207ENST00000415997 ERBINQ96RT1 1412 aa4.95□□□□□ -1.62
APP-207ENST00000415997 GCC2Q8IWJ2 1684 aa4.95□□□□□ -1.62
APP-207ENST00000415997 A0A0A0MRY4 1105 aa4.94□□□□□ -1.62
APP-207ENST00000415997 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
APP-207ENST00000415997 PPP1R12BO60237 982 aaPredicted RBP4.94□□□□□ -1.62
APP-207ENST00000415997 PSMA6P60900 246 aaKnown RBP4.94□□□□□ -1.62
APP-207ENST00000415997 RAC1P63000 192 aa4.94□□□□□ -1.62
APP-207ENST00000415997 MCM6Q14566 821 aa4.94□□□□□ -1.62
APP-207ENST00000415997 GPR162Q16538 588 aa4.94□□□□□ -1.62
APP-207ENST00000415997 DMRTC2Q8IXT2 367 aaPredicted RBP4.94□□□□□ -1.62
APP-207ENST00000415997 TP53INP1Q96A56 240 aa4.94□□□□□ -1.62
APP-207ENST00000415997 PRDM6Q9NQX0 595 aa4.94□□□□□ -1.62
APP-207ENST00000415997 KIAA1024Q9UPX6 916 aa4.94□□□□□ -1.62
APP-207ENST00000415997 RBM19Q9Y4C8 960 aaKnown RBP4.94□□□□□ -1.62
APP-207ENST00000415997 ABCA3Q99758 1704 aa4.94□□□□□ -1.62
APP-207ENST00000415997 ZBTB7BO15156 539 aaPredicted RBP4.93□□□□□ -1.62
APP-207ENST00000415997 PLSCR1O15162 318 aa4.93□□□□□ -1.62
APP-207ENST00000415997 TSPY4P0CV99 314 aa4.93□□□□□ -1.62
APP-207ENST00000415997 TSPY10P0CW01 314 aa4.93□□□□□ -1.62
APP-207ENST00000415997 SELPP16109 830 aa4.93□□□□□ -1.62
APP-207ENST00000415997 MBTPS1Q14703 1052 aa4.93□□□□□ -1.62
APP-207ENST00000415997 C1orf53Q5VUE5 145 aa4.93□□□□□ -1.62
APP-207ENST00000415997 C20orf204Q6ZNR8 217 aa4.93□□□□□ -1.62
APP-207ENST00000415997 TSEN2Q8NCE0 465 aaKnown RBP4.93□□□□□ -1.62
APP-207ENST00000415997 POM121Q96HA1 1249 aa4.93□□□□□ -1.62
APP-207ENST00000415997 ZNF594Q96JF6 807 aaPredicted RBP4.93□□□□□ -1.62
APP-207ENST00000415997 WDR90Q96KV7 1748 aa4.93□□□□□ -1.62
APP-207ENST00000415997 PNMA5Q96PV4 448 aa4.93□□□□□ -1.62
APP-207ENST00000415997 ARXQ96QS3 562 aa4.93□□□□□ -1.62
APP-207ENST00000415997 MTFR1LQ9H019 292 aa4.93□□□□□ -1.62
APP-207ENST00000415997 RRBP1Q9P2E9 1410 aaKnown RBP4.93□□□□□ -1.62
APP-207ENST00000415997 CCDC9Q9Y3X0 531 aaKnown RBP4.93□□□□□ -1.62
APP-207ENST00000415997 GPC6Q9Y625 555 aaPredicted RBP4.93□□□□□ -1.62
APP-207ENST00000415997 TNRC18O15417 2968 aaPredicted RBP4.93□□□□□ -1.62
APP-207ENST00000415997 CDC42BPGQ6DT37 1551 aa4.92□□□□□ -1.62
APP-207ENST00000415997 FOXO3O43524 673 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms