RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 LTBP3Q9NS15 1303 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 PHKA1P46020 1223 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 RBM25P49756 843 aaKnown RBP12.09□□□□□ -0.47
DDB1-202ENST00000414411 EYA3Q99504 573 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
DDB1-202ENST00000414411 ECHDC1Q9NTX5 307 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 TTC41PQ6P2S7 1318 aa12.08□□□□□ -0.47
DDB1-202ENST00000414411 FRAT2O75474 233 aaPredicted RBP12.08□□□□□ -0.48
DDB1-202ENST00000414411 HIBADHP31937 336 aaKnown RBP12.08□□□□□ -0.48
DDB1-202ENST00000414411 KIAA2012Q0VF49 1180 aa12.08□□□□□ -0.48
DDB1-202ENST00000414411 CAVIN4Q5BKX8 364 aa12.08□□□□□ -0.48
DDB1-202ENST00000414411 PI4K2BQ8TCG2 481 aa12.08□□□□□ -0.48
DDB1-202ENST00000414411 TAOK3Q9H2K8 898 aa12.08□□□□□ -0.48
DDB1-202ENST00000414411 CHD4Q14839 1912 aa12.08□□□□□ -0.48
DDB1-202ENST00000414411 AKAP11Q9UKA4 1901 aa12.08□□□□□ -0.48
DDB1-202ENST00000414411 ATP5JP18859 108 aa12.07□□□□□ -0.48
DDB1-202ENST00000414411 ARID4AP29374 1257 aaPredicted RBP12.07□□□□□ -0.48
DDB1-202ENST00000414411 CCDC158Q5M9N0 1113 aa12.07□□□□□ -0.48
DDB1-202ENST00000414411 GORABQ5T7V8 394 aa12.07□□□□□ -0.48
DDB1-202ENST00000414411 SLKQ9H2G2 1235 aaPredicted RBP12.07□□□□□ -0.48
DDB1-202ENST00000414411 RIMBP2O15034 1052 aa12.07□□□□□ -0.48
DDB1-202ENST00000414411 IL1R1P14778 569 aa12.07□□□□□ -0.48
DDB1-202ENST00000414411 PRELPP51888 382 aa12.07□□□□□ -0.48
DDB1-202ENST00000414411 TSHZ3Q63HK5 1081 aa12.07□□□□□ -0.48
DDB1-202ENST00000414411 TDRD7Q8NHU6 1098 aaKnown RBP12.07□□□□□ -0.48
DDB1-202ENST00000414411 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.07□□□□□ -0.48
DDB1-202ENST00000414411 CD209Q9NNX6 404 aa12.07□□□□□ -0.48
DDB1-202ENST00000414411 ZNF277Q9NRM2 450 aaPredicted RBP12.07□□□□□ -0.48
DDB1-202ENST00000414411 AOX1Q06278 1338 aa12.06□□□□□ -0.48
DDB1-202ENST00000414411 AOC3Q16853 763 aa12.06□□□□□ -0.48
DDB1-202ENST00000414411 ARHGAP27Q6ZUM4 889 aa12.06□□□□□ -0.48
DDB1-202ENST00000414411 ZNF804AQ7Z570 1209 aa12.06□□□□□ -0.48
DDB1-202ENST00000414411 COA1Q9GZY4 146 aa12.06□□□□□ -0.48
DDB1-202ENST00000414411 SBF1O95248 1867 aa12.06□□□□□ -0.48
DDB1-202ENST00000414411 UQCRFS1P1P0C7P4 283 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 IARSP41252 1262 aaKnown RBP12.05□□□□□ -0.48
DDB1-202ENST00000414411 MCAMP43121 646 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 SCARF1Q14162 830 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 TBC1D9Q6ZT07 1266 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 VPS37DQ86XT2 251 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 GPATCH3Q96I76 525 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 GNL3LQ9NVN8 582 aaKnown RBP12.05□□□□□ -0.48
DDB1-202ENST00000414411 CCDC88AQ3V6T2 1871 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 COL4A5P29400 1685 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 SEMA3EO15041 775 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 ERC2O15083 957 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 PPIP5K2O43314 1243 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 GLRX3O76003 335 aaKnown RBP12.05□□□□□ -0.48
DDB1-202ENST00000414411 GSPT1P15170 499 aaKnown RBP12.05□□□□□ -0.48
DDB1-202ENST00000414411 RASSF7Q02833 373 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 RASGRF1Q13972 1273 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 GPR162Q16538 588 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 TTC39AQ5SRH9 613 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 PODNQ7Z5L7 613 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 HMG20BQ9P0W2 317 aa12.05□□□□□ -0.48
DDB1-202ENST00000414411 CACNB1Q02641 598 aaPredicted RBP12.04□□□□□ -0.48
DDB1-202ENST00000414411 HAUS7Q99871 368 aa12.04□□□□□ -0.48
DDB1-202ENST00000414411 BOLA2Q9H3K6 86 aa12.04□□□□□ -0.48
DDB1-202ENST00000414411 IQSEC3Q9UPP2 1182 aaPredicted RBP12.04□□□□□ -0.48
DDB1-202ENST00000414411 PDS5AQ29RF7 1337 aaKnown RBP12.04□□□□□ -0.48
DDB1-202ENST00000414411 SCN9AQ15858 1988 aa12.04□□□□□ -0.48
DDB1-202ENST00000414411 GRIN3BO60391 1043 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 CDC45O75419 566 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 GSE1Q14687 1217 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 TTC22Q5TAA0 569 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 PI16Q6UXB8 463 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 LARGE2Q8N3Y3 721 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 SPATA5Q8NB90 893 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 DBNDD1Q9H9R9 158 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 DENND2AQ9ULE3 1009 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 DICER1Q9UPY3 1922 aaKnown RBP12.03□□□□□ -0.48
DDB1-202ENST00000414411 COL1A1P02452 1464 aaPredicted RBP12.03□□□□□ -0.48
DDB1-202ENST00000414411 YDJCA8MPS7 323 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 ECE2O60344 883 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 LMNB1P20700 586 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 HSCBQ8IWL3 235 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 KCNQ5Q9NR82 932 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 NDUFB9Q9Y6M9 179 aa12.03□□□□□ -0.48
DDB1-202ENST00000414411 CYP2E1P05181 493 aaPredicted RBP12.02□□□□□ -0.49
DDB1-202ENST00000414411 ZAP70P43403 619 aa12.02□□□□□ -0.49
DDB1-202ENST00000414411 SNX21Q969T3 373 aa12.02□□□□□ -0.49
DDB1-202ENST00000414411 SNRKQ9NRH2 765 aa12.02□□□□□ -0.49
DDB1-202ENST00000414411 ZNRF3Q9ULT6 936 aa12.02□□□□□ -0.49
DDB1-202ENST00000414411 FAM205AQ6ZU69 1335 aa12.02□□□□□ -0.49
DDB1-202ENST00000414411 MYH13Q9UKX3 1938 aa12.02□□□□□ -0.49
DDB1-202ENST00000414411 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
DDB1-202ENST00000414411 G3V3G9 751 aa12.01□□□□□ -0.49
DDB1-202ENST00000414411 FZD9O00144 591 aa12.01□□□□□ -0.49
DDB1-202ENST00000414411 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
DDB1-202ENST00000414411 JDP2Q8WYK2 163 aa12.01□□□□□ -0.49
DDB1-202ENST00000414411 EDC3Q96F86 508 aaKnown RBP12.01□□□□□ -0.49
DDB1-202ENST00000414411 KIF2CQ99661 725 aa12.01□□□□□ -0.49
DDB1-202ENST00000414411 PAG1Q9NWQ8 432 aa12.01□□□□□ -0.49
DDB1-202ENST00000414411 ZNF646O15015 1829 aaPredicted RBP12□□□□□ -0.49
DDB1-202ENST00000414411 PSME4Q14997 1843 aa12□□□□□ -0.49
DDB1-202ENST00000414411 MYO5AQ9Y4I1 1855 aaKnown RBP12□□□□□ -0.49
DDB1-202ENST00000414411 GTF2IP78347 998 aa12□□□□□ -0.49
DDB1-202ENST00000414411 STRIP1Q5VSL9 837 aa12□□□□□ -0.49
DDB1-202ENST00000414411 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms