RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 PUS3Q9BZE2 481 aaKnown RBP22.18■■□□□ 1.14
TNFRSF8-202ENST00000413146 NWD2Q9ULI1 1742 aa22.18■■□□□ 1.14
TNFRSF8-202ENST00000413146 PCDH11XQ9BZA7 1347 aa22.17■■□□□ 1.14
TNFRSF8-202ENST00000413146 PCDH11YQ9BZA8 1340 aa22.17■■□□□ 1.14
TNFRSF8-202ENST00000413146 FMR1NBQ8N0W7 255 aaPredicted RBP22.17■■□□□ 1.14
TNFRSF8-202ENST00000413146 SDF4Q9BRK5 362 aa22.17■■□□□ 1.14
TNFRSF8-202ENST00000413146 A0A087WWV3 80 aa22.17■■□□□ 1.14
TNFRSF8-202ENST00000413146 DHX16O60231 1041 aaKnown RBP22.17■■□□□ 1.14
TNFRSF8-202ENST00000413146 ZFYP08048 801 aaPredicted RBP22.17■■□□□ 1.14
TNFRSF8-202ENST00000413146 SF3A1Q15459 793 aaKnown RBP22.17■■□□□ 1.14
TNFRSF8-202ENST00000413146 AOPEPQ8N6M6 819 aa22.17■■□□□ 1.14
TNFRSF8-202ENST00000413146 CCDC112Q8NEF3 446 aa22.17■■□□□ 1.14
TNFRSF8-202ENST00000413146 C8orf76Q96K31 380 aa22.17■■□□□ 1.14
TNFRSF8-202ENST00000413146 A0A1W2PQ27 194 aa22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 A0A1W2PQ64 194 aa22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 A0A1W2PQD8 194 aa22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 HAND2P61296 217 aa22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 RBM6P78332 1123 aaKnown RBP22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 STK38Q15208 465 aa22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 SYCP1Q15431 976 aa22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 ZRSR1Q15695 479 aaKnown RBP22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 CCDC57Q2TAC2 916 aa22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 PRDM10Q9NQV6 1147 aa22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 GPHNQ9NQX3 736 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 AKAP2Q9Y2D5 859 aa22.16■■□□□ 1.14
TNFRSF8-202ENST00000413146 CBX1P83916 185 aa22.15■■□□□ 1.14
TNFRSF8-202ENST00000413146 NCBP1Q09161 790 aaKnown RBP22.15■■□□□ 1.14
TNFRSF8-202ENST00000413146 ARID5BQ14865 1188 aa22.15■■□□□ 1.14
TNFRSF8-202ENST00000413146 CEP135Q66GS9 1140 aa22.15■■□□□ 1.14
TNFRSF8-202ENST00000413146 FILIP1Q7Z7B0 1213 aa22.15■■□□□ 1.14
TNFRSF8-202ENST00000413146 KCNG4Q8TDN1 519 aa22.15■■□□□ 1.14
TNFRSF8-202ENST00000413146 ERCC4Q92889 916 aaPredicted RBP22.15■■□□□ 1.14
TNFRSF8-202ENST00000413146 KCPQ6ZWJ8 1503 aa22.15■■□□□ 1.14
TNFRSF8-202ENST00000413146 A0A1B0GVL5 298 aa22.14■■□□□ 1.14
TNFRSF8-202ENST00000413146 GOLGA8BA8MQT2 603 aa22.14■■□□□ 1.14
TNFRSF8-202ENST00000413146 PRC1O43663 620 aa22.14■■□□□ 1.14
TNFRSF8-202ENST00000413146 SKILP12757 684 aa22.14■■□□□ 1.14
TNFRSF8-202ENST00000413146 LINC00301Q8NCQ3 95 aa22.14■■□□□ 1.14
TNFRSF8-202ENST00000413146 FBXW7Q969H0 707 aa22.14■■□□□ 1.14
TNFRSF8-202ENST00000413146 CPDO75976 1380 aa22.14■■□□□ 1.14
TNFRSF8-202ENST00000413146 KLF18A0A0U1RQI7 1052 aa22.14■■□□□ 1.13
TNFRSF8-202ENST00000413146 CCDC69A6NI79 296 aa22.14■■□□□ 1.13
TNFRSF8-202ENST00000413146 ATP2B3Q16720 1220 aa22.14■■□□□ 1.13
TNFRSF8-202ENST00000413146 ERVV-2B6SEH9 535 aa22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 YEATS4O95619 227 aa22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 NDUFA8P51970 172 aa22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 OTUD7BQ6GQQ9 843 aa22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 ZCRB1Q8TBF4 217 aaKnown RBP22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 XAGE2Q96GT9 111 aa22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 CLIC4Q9Y696 253 aa22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 PAPPAQ13219 1627 aa22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 ADORA1P30542 326 aa22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 RALYLQ86SE5 291 aaKnown RBP22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 ZNF592Q92610 1267 aa22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 POLR3EQ9NVU0 708 aa22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 ORC3Q9UBD5 711 aaPredicted RBP22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 MYH7P12883 1935 aa22.13■■□□□ 1.13
TNFRSF8-202ENST00000413146 DCCP43146 1447 aa22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 CPLX1O14810 134 aa22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 FOXP2O15409 715 aa22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 POLR3DP05423 398 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 BRAPQ7Z569 592 aa22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 MB21D2Q8IYB1 491 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 NCOA7Q8NI08 942 aa22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 FBXO3Q9UK99 471 aa22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 DDX60Q8IY21 1712 aaKnown RBP22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 FGAP02671 866 aa22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 FBXO18Q8NFZ0 1043 aa22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 APPBP2Q92624 585 aa22.12■■□□□ 1.13
TNFRSF8-202ENST00000413146 SPTLC2O15270 562 aa22.11■■□□□ 1.13
TNFRSF8-202ENST00000413146 GSDMDP57764 484 aa22.11■■□□□ 1.13
TNFRSF8-202ENST00000413146 CCZ1BP86790 482 aa22.11■■□□□ 1.13
TNFRSF8-202ENST00000413146 CCZ1P86791 482 aaPredicted RBP22.11■■□□□ 1.13
TNFRSF8-202ENST00000413146 PTPN14Q15678 1187 aa22.11■■□□□ 1.13
TNFRSF8-202ENST00000413146 KIAA1468Q9P260 1216 aa22.11■■□□□ 1.13
TNFRSF8-202ENST00000413146 USP27XA6NNY8 438 aa22.11■■□□□ 1.13
TNFRSF8-202ENST00000413146 TAF7LQ5H9L4 462 aa22.11■■□□□ 1.13
TNFRSF8-202ENST00000413146 MYSM1Q5VVJ2 828 aa22.11■■□□□ 1.13
TNFRSF8-202ENST00000413146 SPATA31A3Q5VYP0 1347 aa22.1■■□□□ 1.13
TNFRSF8-202ENST00000413146 U2AF2P26368 475 aaKnown RBP eCLIP22.1■■□□□ 1.13
TNFRSF8-202ENST00000413146 SYNE3Q6ZMZ3 975 aa22.1■■□□□ 1.13
TNFRSF8-202ENST00000413146 HPS5Q9UPZ3 1129 aa22.1■■□□□ 1.13
TNFRSF8-202ENST00000413146 HSP90AB3PQ58FF7 597 aa22.1■■□□□ 1.13
TNFRSF8-202ENST00000413146 ISCA1Q9BUE6 129 aa22.1■■□□□ 1.13
TNFRSF8-202ENST00000413146 PRDM4Q9UKN5 801 aa22.1■■□□□ 1.13
TNFRSF8-202ENST00000413146 ABCC12Q96J65 1359 aa22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 ZNF213O14771 459 aa22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 ZAP70P43403 619 aa22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 SCARF1Q14162 830 aa22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 DPCR1Q3MIW9 517 aa22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 TOM1L2Q6ZVM7 507 aa22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 BPIFA3Q9BQP9 254 aa22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 XIRP1Q702N8 1843 aaKnown RBP22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 SPDYE4A6NLX3 237 aa22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 NYAP1Q6ZVC0 841 aa22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 RAB11FIP4Q86YS3 637 aa22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 PUS7LQ9H0K6 701 aaKnown RBP22.09■■□□□ 1.13
TNFRSF8-202ENST00000413146 ANTXR2P58335 489 aa22.08■■□□□ 1.13
TNFRSF8-202ENST00000413146 TCIRG1Q13488 830 aa22.08■■□□□ 1.13
TNFRSF8-202ENST00000413146 IMPACTQ9P2X3 320 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms