RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 PPP2R3BQ9Y5P8 575 aa21.25■□□□□ 0.99
MRPL55-220ENST00000411464 FANCIQ9NVI1 1328 aa21.25■□□□□ 0.99
MRPL55-220ENST00000411464 MANSC4A6NHS7 340 aaPredicted RBP21.24■□□□□ 0.99
MRPL55-220ENST00000411464 IL1R1P14778 569 aa21.24■□□□□ 0.99
MRPL55-220ENST00000411464 FOXO4P98177 505 aa21.24■□□□□ 0.99
MRPL55-220ENST00000411464 SUPT20HL1Q3ZLR7 823 aa21.24■□□□□ 0.99
MRPL55-220ENST00000411464 FZD1Q9UP38 647 aa21.24■□□□□ 0.99
MRPL55-220ENST00000411464 FKBP1AP62942 108 aaKnown RBP21.23■□□□□ 0.99
MRPL55-220ENST00000411464 MAP3K11Q16584 847 aa21.23■□□□□ 0.99
MRPL55-220ENST00000411464 CCDC57Q2TAC2 916 aa21.23■□□□□ 0.99
MRPL55-220ENST00000411464 CFAP100Q494V2 611 aa21.23■□□□□ 0.99
MRPL55-220ENST00000411464 TAF7LQ5H9L4 462 aa21.23■□□□□ 0.99
MRPL55-220ENST00000411464 WDR63Q8IWG1 891 aa21.23■□□□□ 0.99
MRPL55-220ENST00000411464 R3HDMLQ9H3Y0 253 aa21.23■□□□□ 0.99
MRPL55-220ENST00000411464 SALL2Q9Y467 1007 aaPredicted RBP21.23■□□□□ 0.99
MRPL55-220ENST00000411464 COL1A1P02452 1464 aaPredicted RBP21.23■□□□□ 0.99
MRPL55-220ENST00000411464 IRS2Q9Y4H2 1338 aa21.23■□□□□ 0.99
MRPL55-220ENST00000411464 CLRN2A0PK11 232 aa21.22■□□□□ 0.99
MRPL55-220ENST00000411464 F6X3S4 739 aa21.22■□□□□ 0.99
MRPL55-220ENST00000411464 PLIN1O60240 522 aa21.22■□□□□ 0.99
MRPL55-220ENST00000411464 RBM5P52756 815 aaKnown RBP eCLIP21.22■□□□□ 0.991e-8■■■■■ 47.1
MRPL55-220ENST00000411464 EXOSC9Q06265 439 aaKnown RBP21.22■□□□□ 0.99
MRPL55-220ENST00000411464 BEND3Q5T5X7 828 aa21.22■□□□□ 0.99
MRPL55-220ENST00000411464 LMBR1LQ6UX01 489 aa21.22■□□□□ 0.99
MRPL55-220ENST00000411464 LDHAL6AQ6ZMR3 332 aa21.22■□□□□ 0.99
MRPL55-220ENST00000411464 VEZTQ9HBM0 779 aa21.22■□□□□ 0.99
MRPL55-220ENST00000411464 SPDYE2BA6NHP3 402 aa21.21■□□□□ 0.99
MRPL55-220ENST00000411464 UNCXA6NJT0 531 aa21.21■□□□□ 0.99
MRPL55-220ENST00000411464 SPDYE6P0CI01 402 aa21.21■□□□□ 0.99
MRPL55-220ENST00000411464 ZBTB48P10074 688 aaPredicted RBP21.21■□□□□ 0.99
MRPL55-220ENST00000411464 PRPF38BQ5VTL8 546 aaKnown RBP21.21■□□□□ 0.99
MRPL55-220ENST00000411464 IFNL1Q8IU54 200 aa21.21■□□□□ 0.99
MRPL55-220ENST00000411464 PRMT6Q96LA8 375 aaPredicted RBP21.21■□□□□ 0.99
MRPL55-220ENST00000411464 CNNM1Q9NRU3 951 aa21.21■□□□□ 0.99
MRPL55-220ENST00000411464 PCDH10Q9P2E7 1040 aa21.21■□□□□ 0.99
MRPL55-220ENST00000411464 PCDHAC2Q9Y5I4 1007 aa21.21■□□□□ 0.99
MRPL55-220ENST00000411464 WNK4Q96J92 1243 aa21.2■□□□□ 0.98
MRPL55-220ENST00000411464 CLMNQ96JQ2 1002 aa21.2■□□□□ 0.98
MRPL55-220ENST00000411464 MRS2Q9HD23 443 aa21.2■□□□□ 0.98
MRPL55-220ENST00000411464 JAG2Q9Y219 1238 aa21.2■□□□□ 0.98
MRPL55-220ENST00000411464 MYH3P11055 1940 aa21.19■□□□□ 0.98
MRPL55-220ENST00000411464 IREB2P48200 963 aaKnown RBP21.19■□□□□ 0.98
MRPL55-220ENST00000411464 ZNF594Q96JF6 807 aaPredicted RBP21.19■□□□□ 0.98
MRPL55-220ENST00000411464 SPEF2Q9C093 1822 aa21.18■□□□□ 0.98
MRPL55-220ENST00000411464 GRM8O00222 908 aa21.18■□□□□ 0.98
MRPL55-220ENST00000411464 EPHA10Q5JZY3 1008 aa21.18■□□□□ 0.98
MRPL55-220ENST00000411464 NBPF12Q5TAG4 269 aaPredicted RBP21.18■□□□□ 0.98
MRPL55-220ENST00000411464 OTUD7BQ6GQQ9 843 aa21.18■□□□□ 0.98
MRPL55-220ENST00000411464 C9orf78Q9NZ63 289 aaPredicted RBP21.18■□□□□ 0.98
MRPL55-220ENST00000411464 RASA3Q14644 834 aa21.17■□□□□ 0.98
MRPL55-220ENST00000411464 TRIM17Q9Y577 477 aa21.17■□□□□ 0.98
MRPL55-220ENST00000411464 USP2O75604 605 aaPredicted RBP21.16■□□□□ 0.98
MRPL55-220ENST00000411464 TNFAIP1Q13829 316 aa21.16■□□□□ 0.98
MRPL55-220ENST00000411464 ANKRD13AQ8IZ07 590 aa21.16■□□□□ 0.98
MRPL55-220ENST00000411464 PDE4DIPQ5VU43 2346 aa21.15■□□□□ 0.98
MRPL55-220ENST00000411464 IGF2BP3O00425 579 aaKnown RBP eCLIP21.15■□□□□ 0.98
MRPL55-220ENST00000411464 HIBADHP31937 336 aaKnown RBP21.15■□□□□ 0.98
MRPL55-220ENST00000411464 UBE4AQ14139 1066 aa21.15■□□□□ 0.98
MRPL55-220ENST00000411464 MFSD14BQ5SR56 506 aa21.15■□□□□ 0.98
MRPL55-220ENST00000411464 AOX1Q06278 1338 aa21.14■□□□□ 0.97
MRPL55-220ENST00000411464 FAM205AQ6ZU69 1335 aa21.14■□□□□ 0.97
MRPL55-220ENST00000411464 ZNF646O15015 1829 aaPredicted RBP21.14■□□□□ 0.97
MRPL55-220ENST00000411464 ALDH1L1O75891 902 aa21.14■□□□□ 0.97
MRPL55-220ENST00000411464 SLC4A10Q6U841 1118 aa21.14■□□□□ 0.97
MRPL55-220ENST00000411464 TDRD7Q8NHU6 1098 aaKnown RBP21.14■□□□□ 0.97
MRPL55-220ENST00000411464 SERPINA10Q9UK55 444 aa21.14■□□□□ 0.97
MRPL55-220ENST00000411464 TTF2Q9UNY4 1162 aaKnown RBP21.14■□□□□ 0.97
MRPL55-220ENST00000411464 SSC5DA1L4H1 1573 aa21.14■□□□□ 0.97
MRPL55-220ENST00000411464 GYG1P46976 350 aa21.13■□□□□ 0.97
MRPL55-220ENST00000411464 INTS3Q68E01 1043 aaKnown RBP21.13■□□□□ 0.97
MRPL55-220ENST00000411464 OTOP1Q7RTM1 612 aa21.13■□□□□ 0.97
MRPL55-220ENST00000411464 ERO1AQ96HE7 468 aa21.13■□□□□ 0.97
MRPL55-220ENST00000411464 SRCIN1Q9C0H9 1055 aa21.13■□□□□ 0.97
MRPL55-220ENST00000411464 ZNF70Q9UC06 446 aaPredicted RBP21.13■□□□□ 0.97
MRPL55-220ENST00000411464 SPDYE2Q495Y8 402 aa21.12■□□□□ 0.97
MRPL55-220ENST00000411464 TDRD3Q9H7E2 651 aaKnown RBP21.12■□□□□ 0.97
MRPL55-220ENST00000411464 ANP32CO43423 234 aa21.11■□□□□ 0.97
MRPL55-220ENST00000411464 GJA5P36382 358 aa21.11■□□□□ 0.97
MRPL55-220ENST00000411464 CRHR2Q13324 411 aa21.11■□□□□ 0.97
MRPL55-220ENST00000411464 DZIP1LQ8IYY4 767 aaKnown RBP21.11■□□□□ 0.97
MRPL55-220ENST00000411464 FAM84BQ96KN1 310 aaPredicted RBP21.11■□□□□ 0.97
MRPL55-220ENST00000411464 ELP3Q9H9T3 547 aa21.11■□□□□ 0.97
MRPL55-220ENST00000411464 SPINK5Q9NQ38 1064 aaPredicted RBP21.11■□□□□ 0.97
MRPL55-220ENST00000411464 VPS37DQ86XT2 251 aa21.1■□□□□ 0.97
MRPL55-220ENST00000411464 OPTNQ96CV9 577 aa21.1■□□□□ 0.97
MRPL55-220ENST00000411464 TESPA1A2RU30 521 aaPredicted RBP21.09■□□□□ 0.97
MRPL55-220ENST00000411464 TCP10L2B9ZVM9 353 aa21.09■□□□□ 0.97
MRPL55-220ENST00000411464 TNNI2P48788 182 aa21.09■□□□□ 0.97
MRPL55-220ENST00000411464 SP3Q02447 781 aa21.09■□□□□ 0.97
MRPL55-220ENST00000411464 CD99L2Q8TCZ2 262 aa21.09■□□□□ 0.97
MRPL55-220ENST00000411464 PTPN18Q99952 460 aa21.09■□□□□ 0.97
MRPL55-220ENST00000411464 PUS3Q9BZE2 481 aaKnown RBP21.09■□□□□ 0.97
MRPL55-220ENST00000411464 EFCC1Q9HA90 598 aa21.09■□□□□ 0.97
MRPL55-220ENST00000411464 PTPN22Q9Y2R2 807 aa21.09■□□□□ 0.97
MRPL55-220ENST00000411464 MROH5Q6ZUA9 1318 aa21.08■□□□□ 0.97
MRPL55-220ENST00000411464 CRKP46108 304 aa21.08■□□□□ 0.97
MRPL55-220ENST00000411464 SUCLG2Q96I99 432 aa21.08■□□□□ 0.97
MRPL55-220ENST00000411464 RIPOR2Q9Y4F9 1068 aa21.08■□□□□ 0.97
MRPL55-220ENST00000411464 FRAT2O75474 233 aaPredicted RBP21.07■□□□□ 0.96
MRPL55-220ENST00000411464 CAVIN4Q5BKX8 364 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms