RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 WNT10BO00744 389 aa11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 SASH1O94885 1247 aa11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 IFIT1P09914 478 aaKnown RBP11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 ZNF157P51786 506 aaPredicted RBP11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 RARSP54136 660 aaKnown RBP11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 PUM3Q15397 648 aaKnown RBP11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 MTMR14Q8NCE2 650 aa11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 TBC1D22AQ8WUA7 517 aa11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 NOB1Q9ULX3 412 aaKnown RBP11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 RIPOR2Q9Y4F9 1068 aa11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 PPP2R3BQ9Y5P8 575 aa11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 FAM205AQ6ZU69 1335 aa11.35□□□□□ -0.59
SNORD88A-201ENST00000408314 POLR2AP24928 1970 aaKnown RBP11.34□□□□□ -0.59
SNORD88A-201ENST00000408314 FRAT2O75474 233 aaPredicted RBP11.34□□□□□ -0.59
SNORD88A-201ENST00000408314 PDE8BO95263 885 aa11.34□□□□□ -0.59
SNORD88A-201ENST00000408314 GNAI3P08754 354 aa11.34□□□□□ -0.59
SNORD88A-201ENST00000408314 NBPF9Q3BBW0 867 aa11.34□□□□□ -0.59
SNORD88A-201ENST00000408314 ARAP2Q8WZ64 1704 aa11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 EYA2O00167 538 aa11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 HSPA8P11142 646 aaKnown RBP11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 SLC5A1P13866 664 aa11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 TNFAIP1Q13829 316 aa11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 TTLL12Q14166 644 aaPredicted RBP11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 MFSD14BQ5SR56 506 aa11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 ARMC9Q7Z3E5 817 aa11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 TDRD7Q8NHU6 1098 aaKnown RBP11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 MXD3Q9BW11 206 aa11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 MAST3O60307 1309 aa11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 ASTN2O75129 1339 aaPredicted RBP11.33□□□□□ -0.6
SNORD88A-201ENST00000408314 SNAP23O00161 211 aa11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 AOC2O75106 756 aa11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 CIAO1O76071 339 aa11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 SLC10A3P09131 477 aa11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 GYG1P46976 350 aa11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 RBM5P52756 815 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 LBX1P52954 281 aa11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 INTS3Q68E01 1043 aaKnown RBP11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 ZBED3Q96IU2 234 aaPredicted RBP11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 FAM84BQ96KN1 310 aaPredicted RBP11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 PUS3Q9BZE2 481 aaKnown RBP11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 SAGE1Q9NXZ1 904 aa11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 SERPINA10Q9UK55 444 aa11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 SUGT1Q9Y2Z0 365 aa11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 ECM29Q5VYK3 1845 aa11.32□□□□□ -0.6
SNORD88A-201ENST00000408314 SPDYE2BA6NHP3 402 aa11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 UNCXA6NJT0 531 aa11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 F8W031 263 aaPredicted RBP11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 SPDYE6P0CI01 402 aa11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 SUPT20HL1Q3ZLR7 823 aa11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 CFAP100Q494V2 611 aa11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 FBXO33Q7Z6M2 555 aa11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 CERS5Q8N5B7 392 aa11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 VGLL2Q8N8G2 317 aa11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 LPIN2Q92539 896 aa11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 GNL3LQ9NVN8 582 aaKnown RBP11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 CEP126Q9P2H0 1117 aa11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 TTF2Q9UNY4 1162 aaKnown RBP11.31□□□□□ -0.6
SNORD88A-201ENST00000408314 PPP1R12BO60237 982 aaPredicted RBP11.3□□□□□ -0.6
SNORD88A-201ENST00000408314 IL15P40933 162 aaPredicted RBP11.3□□□□□ -0.6
SNORD88A-201ENST00000408314 TNNI2P48788 182 aa11.3□□□□□ -0.6
SNORD88A-201ENST00000408314 HDLBPQ00341 1268 aaKnown RBP11.3□□□□□ -0.6
SNORD88A-201ENST00000408314 PTPN12Q05209 780 aaKnown RBP11.3□□□□□ -0.6
SNORD88A-201ENST00000408314 ATF7IPQ6VMQ6 1270 aa11.3□□□□□ -0.6
SNORD88A-201ENST00000408314 MIER1Q8N108 512 aa11.3□□□□□ -0.6
SNORD88A-201ENST00000408314 DEFB129Q9H1M3 183 aa11.3□□□□□ -0.6
SNORD88A-201ENST00000408314 TMOD2Q9NZR1 351 aa11.3□□□□□ -0.6
SNORD88A-201ENST00000408314 LRRFIP2Q9Y608 721 aaKnown RBP11.3□□□□□ -0.6
SNORD88A-201ENST00000408314 FAM155AB1AL88 458 aaPredicted RBP11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 FGFR2P21802 821 aa11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 RFX5P48382 616 aaPredicted RBP11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 KIF23Q02241 960 aaPredicted RBP11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 CHAF1AQ13111 956 aaPredicted RBP11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 ZKSCAN2Q63HK3 967 aa11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 DLK2Q6UY11 383 aa11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 RASAL3Q86YV0 1011 aa11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 KLHDC4Q8TBB5 520 aa11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 WDR66Q8TBY9 1149 aa11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 FRAT1Q92837 279 aaPredicted RBP11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 VEZTQ9HBM0 779 aa11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 COPRSQ9NQ92 184 aa11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 JAG2Q9Y219 1238 aa11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 ZBED9Q6R2W3 1325 aa11.29□□□□□ -0.6
SNORD88A-201ENST00000408314 SEMA3EO15041 775 aa11.28□□□□□ -0.6
SNORD88A-201ENST00000408314 SREBF2Q12772 1141 aa11.28□□□□□ -0.6
SNORD88A-201ENST00000408314 MTX1Q13505 466 aa11.28□□□□□ -0.6
SNORD88A-201ENST00000408314 ATP2B3Q16720 1220 aa11.28□□□□□ -0.6
SNORD88A-201ENST00000408314 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
SNORD88A-201ENST00000408314 TEKT1Q969V4 418 aa11.28□□□□□ -0.6
SNORD88A-201ENST00000408314 HOOK2Q96ED9 719 aa11.28□□□□□ -0.6
SNORD88A-201ENST00000408314 ZBTB22O15209 634 aa11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 GNAI2P04899 355 aa11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 TRIM27P14373 513 aa11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 CRKP46108 304 aa11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 IREB2P48200 963 aaKnown RBP11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 FTSJ3Q8IY81 847 aaKnown RBP11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 DZIP1LQ8IYY4 767 aaKnown RBP11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 ZGPATQ8N5A5 531 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms