RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SPAG5Q96R06 1193 aa20.73■□□□□ 0.91
COL18A1-204ENST00000400337 TFCP2L1Q9NZI6 479 aa20.73■□□□□ 0.91
COL18A1-204ENST00000400337 TRAF1Q13077 416 aa20.72■□□□□ 0.91
COL18A1-204ENST00000400337 RIMBP2O15034 1052 aa20.72■□□□□ 0.91
COL18A1-204ENST00000400337 PLCG2P16885 1265 aa20.72■□□□□ 0.91
COL18A1-204ENST00000400337 SMARCC2Q8TAQ2 1214 aa20.72■□□□□ 0.91
COL18A1-204ENST00000400337 PAXBP1Q9Y5B6 917 aa20.72■□□□□ 0.91
COL18A1-204ENST00000400337 RRP36Q96EU6 259 aaKnown RBP20.72■□□□□ 0.91
COL18A1-204ENST00000400337 BICD1Q96G01 975 aa20.72■□□□□ 0.91
COL18A1-204ENST00000400337 BCCIPQ9P287 314 aaKnown RBP eCLIP20.72■□□□□ 0.91
COL18A1-204ENST00000400337 PNMA6EA0A0J9YXQ4 647 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 POTEB2H3BUK9 544 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 ZMYM4Q5VZL5 1548 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 GNPATO15228 680 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 NOLC1Q14978 699 aaKnown RBP eCLIP20.71■□□□□ 0.912e-6■■■■□ 23.2
COL18A1-204ENST00000400337 CCDC174Q6PII3 467 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 ZNF594Q96JF6 807 aaPredicted RBP20.71■□□□□ 0.91
COL18A1-204ENST00000400337 SHTN1A0MZ66 631 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 CTNNA2P26232 953 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 SPECC1Q5M775 1068 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 BRAPQ7Z569 592 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 PUF60Q9UHX1 559 aaKnown RBP20.71■□□□□ 0.91
COL18A1-204ENST00000400337 SLC52A2Q9HAB3 445 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 PRDM10Q9NQV6 1147 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 ATP10AO60312 1499 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 A1BGP04217 495 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 TNNI2P48788 182 aa20.71■□□□□ 0.91
COL18A1-204ENST00000400337 TTC12Q9H892 705 aaPredicted RBP20.71■□□□□ 0.91
COL18A1-204ENST00000400337 MCM7P33993 719 aa20.7■□□□□ 0.9
COL18A1-204ENST00000400337 PTPRTO14522 1441 aa20.7■□□□□ 0.9
COL18A1-204ENST00000400337 RPS6KB1P23443 525 aa20.7■□□□□ 0.9
COL18A1-204ENST00000400337 EHBP1Q8NDI1 1231 aa20.7■□□□□ 0.9
COL18A1-204ENST00000400337 SUCLG2Q96I99 432 aa20.7■□□□□ 0.9
COL18A1-204ENST00000400337 VEZTQ9HBM0 779 aa20.7■□□□□ 0.9
COL18A1-204ENST00000400337 SH3TC1Q8TE82 1336 aa20.7■□□□□ 0.9
COL18A1-204ENST00000400337 SLC27A2O14975 620 aa20.69■□□□□ 0.9
COL18A1-204ENST00000400337 PRIMPOLQ96LW4 560 aa20.69■□□□□ 0.9
COL18A1-204ENST00000400337 KIF21AQ7Z4S6 1674 aa20.69■□□□□ 0.9
COL18A1-204ENST00000400337 CYLC1P35663 651 aaPredicted RBP20.69■□□□□ 0.9
COL18A1-204ENST00000400337 FAM227BQ96M60 508 aa20.69■□□□□ 0.9
COL18A1-204ENST00000400337 DNAI1Q9UI46 699 aa20.69■□□□□ 0.9
COL18A1-204ENST00000400337 WWC3Q9ULE0 1092 aa20.69■□□□□ 0.9
COL18A1-204ENST00000400337 XAGE2Q96GT9 111 aa20.69■□□□□ 0.9
COL18A1-204ENST00000400337 STX17P56962 302 aa20.68■□□□□ 0.9
COL18A1-204ENST00000400337 PAXIP1Q6ZW49 1069 aaPredicted RBP20.68■□□□□ 0.9
COL18A1-204ENST00000400337 B4E1Z4 1266 aa20.68■□□□□ 0.9
COL18A1-204ENST00000400337 KRT79Q5XKE5 535 aa20.68■□□□□ 0.9
COL18A1-204ENST00000400337 DENND2AQ9ULE3 1009 aa20.68■□□□□ 0.9
COL18A1-204ENST00000400337 PTGS1P23219 599 aa20.68■□□□□ 0.9
COL18A1-204ENST00000400337 MAP2K1Q02750 393 aaPredicted RBP20.68■□□□□ 0.9
COL18A1-204ENST00000400337 KDM2BQ8NHM5 1336 aa20.68■□□□□ 0.9
COL18A1-204ENST00000400337 HOOK3Q86VS8 718 aa20.68■□□□□ 0.9
COL18A1-204ENST00000400337 PKNOX2Q96KN3 472 aa20.68■□□□□ 0.9
COL18A1-204ENST00000400337 TAOK3Q9H2K8 898 aa20.68■□□□□ 0.9
COL18A1-204ENST00000400337 SPDYE3A6NKU9 549 aa20.67■□□□□ 0.9
COL18A1-204ENST00000400337 PARP3Q9Y6F1 533 aa20.67■□□□□ 0.9
COL18A1-204ENST00000400337 PUM3Q15397 648 aaKnown RBP20.67■□□□□ 0.9
COL18A1-204ENST00000400337 RNF216Q9NWF9 866 aaPredicted RBP20.67■□□□□ 0.9
COL18A1-204ENST00000400337 SNX14Q9Y5W7 946 aa20.67■□□□□ 0.9
COL18A1-204ENST00000400337 FERMT2Q96AC1 680 aa20.67■□□□□ 0.9
COL18A1-204ENST00000400337 PARP10Q53GL7 1025 aa20.67■□□□□ 0.9
COL18A1-204ENST00000400337 TRAPPC3LQ5T215 181 aa20.67■□□□□ 0.9
COL18A1-204ENST00000400337 GNA11P29992 359 aa20.66■□□□□ 0.9
COL18A1-204ENST00000400337 SGSM2O43147 1006 aa20.66■□□□□ 0.9
COL18A1-204ENST00000400337 CCDC172P0C7W6 258 aa20.66■□□□□ 0.9
COL18A1-204ENST00000400337 ARMT1Q9H993 441 aa20.66■□□□□ 0.9
COL18A1-204ENST00000400337 PDE8AO60658 829 aa20.66■□□□□ 0.9
COL18A1-204ENST00000400337 ZKSCAN5Q9Y2L8 839 aa20.66■□□□□ 0.9
COL18A1-204ENST00000400337 GCKRQ14397 625 aa20.65■□□□□ 0.9
COL18A1-204ENST00000400337 TBC1D5Q92609 795 aa20.65■□□□□ 0.9
COL18A1-204ENST00000400337 DRC1Q96MC2 740 aa20.65■□□□□ 0.9
COL18A1-204ENST00000400337 A0A1B0GVL5 298 aa20.65■□□□□ 0.9
COL18A1-204ENST00000400337 NDUFB9Q9Y6M9 179 aa20.65■□□□□ 0.9
COL18A1-204ENST00000400337 DTHD1Q6ZMT9 781 aa20.65■□□□□ 0.9
COL18A1-204ENST00000400337 DDX17Q92841 729 aaKnown RBP20.65■□□□□ 0.9
COL18A1-204ENST00000400337 ZNF496Q96IT1 587 aaPredicted RBP20.65■□□□□ 0.9
COL18A1-204ENST00000400337 PLIN2Q99541 437 aa20.65■□□□□ 0.9
COL18A1-204ENST00000400337 AOX1Q06278 1338 aa20.65■□□□□ 0.9
COL18A1-204ENST00000400337 IFI16Q16666 785 aaKnown RBP20.65■□□□□ 0.9
COL18A1-204ENST00000400337 GCOM1H8Y6P7 765 aaPredicted RBP20.64■□□□□ 0.9
COL18A1-204ENST00000400337 MYZAPP0CAP1 466 aa20.64■□□□□ 0.9
COL18A1-204ENST00000400337 KRT13P13646 458 aa20.64■□□□□ 0.9
COL18A1-204ENST00000400337 CTR9Q6PD62 1173 aa20.64■□□□□ 0.9
COL18A1-204ENST00000400337 EIF4A1P60842 406 aaKnown RBP20.64■□□□□ 0.9
COL18A1-204ENST00000400337 CNBD1Q8NA66 436 aa20.64■□□□□ 0.9
COL18A1-204ENST00000400337 APPBP2Q92624 585 aa20.64■□□□□ 0.9
COL18A1-204ENST00000400337 RBM28Q9NW13 759 aaKnown RBP20.64■□□□□ 0.9
COL18A1-204ENST00000400337 DYNC1I1O14576 645 aa20.64■□□□□ 0.89
COL18A1-204ENST00000400337 CCDC91Q7Z6B0 441 aa20.64■□□□□ 0.89
COL18A1-204ENST00000400337 MPHOSPH6Q99547 160 aaKnown RBP20.64■□□□□ 0.89
COL18A1-204ENST00000400337 RBM26Q5T8P6 1007 aaKnown RBP20.64■□□□□ 0.89
COL18A1-204ENST00000400337 SAP30BPQ9UHR5 308 aaKnown RBP20.64■□□□□ 0.89
COL18A1-204ENST00000400337 GPAA1O43292 621 aa20.63■□□□□ 0.89
COL18A1-204ENST00000400337 EYA3Q99504 573 aa20.63■□□□□ 0.89
COL18A1-204ENST00000400337 NCOA5Q9HCD5 579 aaKnown RBP20.63■□□□□ 0.89
COL18A1-204ENST00000400337 IFNKQ9P0W0 207 aa20.63■□□□□ 0.89
COL18A1-204ENST00000400337 PLEKHG3A1L390 1219 aa20.63■□□□□ 0.89
COL18A1-204ENST00000400337 HIBADHP31937 336 aaKnown RBP20.63■□□□□ 0.89
COL18A1-204ENST00000400337 CLCN1P35523 988 aa20.63■□□□□ 0.89
COL18A1-204ENST00000400337 MAATS1Q7Z4T9 603 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms