RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 BTAF1O14981 1849 aa18.59■□□□□ 0.57
CDC42-203ENST00000400259 KCNQ2O43526 872 aa18.59■□□□□ 0.57
CDC42-203ENST00000400259 JAK2O60674 1132 aa18.59■□□□□ 0.57
CDC42-203ENST00000400259 FGAP02671 866 aa18.59■□□□□ 0.57
CDC42-203ENST00000400259 SLC5A1P13866 664 aa18.59■□□□□ 0.57
CDC42-203ENST00000400259 PIP4K2BP78356 416 aa18.59■□□□□ 0.57
CDC42-203ENST00000400259 CHMP4CQ96CF2 233 aa18.59■□□□□ 0.57
CDC42-203ENST00000400259 NIP7Q9Y221 180 aaKnown RBP eCLIP18.59■□□□□ 0.57
CDC42-203ENST00000400259 NHSQ6T4R5 1651 aa18.59■□□□□ 0.57
CDC42-203ENST00000400259 THSD7AQ9UPZ6 1657 aa18.59■□□□□ 0.57
CDC42-203ENST00000400259 LETM1O95202 739 aaPredicted RBP18.58■□□□□ 0.57
CDC42-203ENST00000400259 PIH1D3Q9NQM4 214 aaKnown RBP18.58■□□□□ 0.57
CDC42-203ENST00000400259 WDR19Q8NEZ3 1342 aa18.58■□□□□ 0.57
CDC42-203ENST00000400259 NSUN7Q8NE18 718 aaKnown RBP18.58■□□□□ 0.56
CDC42-203ENST00000400259 MPHOSPH8Q99549 860 aa18.58■□□□□ 0.56
CDC42-203ENST00000400259 TSPY26PQ9H489 355 aa18.58■□□□□ 0.56
CDC42-203ENST00000400259 HMGN5P82970 282 aaKnown RBP18.57■□□□□ 0.56
CDC42-203ENST00000400259 APOBRQ0VD83 1088 aa18.57■□□□□ 0.56
CDC42-203ENST00000400259 SLC9C2Q5TAH2 1124 aa18.57■□□□□ 0.56
CDC42-203ENST00000400259 COL24A1Q17RW2 1714 aa18.57■□□□□ 0.56
CDC42-203ENST00000400259 CNTNAP4Q9C0A0 1308 aa18.57■□□□□ 0.56
CDC42-203ENST00000400259 SALL1Q9NSC2 1324 aa18.57■□□□□ 0.56
CDC42-203ENST00000400259 SEC31BQ9NQW1 1179 aa18.57■□□□□ 0.56
CDC42-203ENST00000400259 TCRBV5S4A2TA0A5A2 114 aa18.56■□□□□ 0.56
CDC42-203ENST00000400259 FAM98CQ17RN3 349 aaKnown RBP18.56■□□□□ 0.56
CDC42-203ENST00000400259 MB21D2Q8IYB1 491 aaPredicted RBP18.56■□□□□ 0.56
CDC42-203ENST00000400259 CTDNEP1O95476 244 aa18.56■□□□□ 0.56
CDC42-203ENST00000400259 PDIA3P30101 505 aaKnown RBP18.56■□□□□ 0.56
CDC42-203ENST00000400259 FERMT3Q86UX7 667 aa18.56■□□□□ 0.56
CDC42-203ENST00000400259 LINC00116Q8NCU8 138 aa18.56■□□□□ 0.56
CDC42-203ENST00000400259 PDLIM2Q96JY6 352 aa18.56■□□□□ 0.56
CDC42-203ENST00000400259 SCAND2PQ9GZW5 306 aaPredicted RBP18.56■□□□□ 0.56
CDC42-203ENST00000400259 PDE6AP16499 860 aa18.55■□□□□ 0.56
CDC42-203ENST00000400259 IGHMBP2P38935 993 aaKnown RBP18.55■□□□□ 0.56
CDC42-203ENST00000400259 RESTQ13127 1097 aa18.55■□□□□ 0.56
CDC42-203ENST00000400259 TTC6Q86TZ1 520 aa18.55■□□□□ 0.56
CDC42-203ENST00000400259 SPATA5Q8NB90 893 aa18.55■□□□□ 0.56
CDC42-203ENST00000400259 HELBQ8NG08 1087 aaPredicted RBP18.55■□□□□ 0.56
CDC42-203ENST00000400259 ZSCAN16Q9H4T2 348 aaPredicted RBP18.55■□□□□ 0.56
CDC42-203ENST00000400259 KIF3AQ9Y496 699 aa18.55■□□□□ 0.56
CDC42-203ENST00000400259 COL4A1P02462 1669 aa18.55■□□□□ 0.56
CDC42-203ENST00000400259 ZMYM6O95789 1325 aa18.55■□□□□ 0.56
CDC42-203ENST00000400259 ZNF532Q9HCE3 1301 aa18.55■□□□□ 0.56
CDC42-203ENST00000400259 C4AP0C0L4 1744 aa18.55■□□□□ 0.56
CDC42-203ENST00000400259 C4BP0C0L5 1744 aa18.55■□□□□ 0.56
CDC42-203ENST00000400259 NAA16Q6N069 864 aaPredicted RBP18.54■□□□□ 0.56
CDC42-203ENST00000400259 TRIM44Q96DX7 344 aaPredicted RBP18.54■□□□□ 0.56
CDC42-203ENST00000400259 TAF1LQ8IZX4 1826 aa18.54■□□□□ 0.56
CDC42-203ENST00000400259 FAM177BA6PVY3 158 aa18.54■□□□□ 0.56
CDC42-203ENST00000400259 ZNF213O14771 459 aa18.54■□□□□ 0.56
CDC42-203ENST00000400259 IDH1O75874 414 aaKnown RBP18.54■□□□□ 0.56
CDC42-203ENST00000400259 MCM5P33992 734 aa18.54■□□□□ 0.56
CDC42-203ENST00000400259 FNBP4Q8N3X1 1017 aaPredicted RBP18.54■□□□□ 0.56
CDC42-203ENST00000400259 FAM184AQ8NB25 1140 aa18.54■□□□□ 0.56
CDC42-203ENST00000400259 NCOA7Q8NI08 942 aa18.54■□□□□ 0.56
CDC42-203ENST00000400259 LY75O60449 1722 aa18.54■□□□□ 0.56
CDC42-203ENST00000400259 TIAM2Q8IVF5 1701 aa18.54■□□□□ 0.56
CDC42-203ENST00000400259 PTPDC1A2A3K4 754 aa18.53■□□□□ 0.56
CDC42-203ENST00000400259 HAND2P61296 217 aa18.53■□□□□ 0.56
CDC42-203ENST00000400259 RASGRF1Q13972 1273 aa18.53■□□□□ 0.56
CDC42-203ENST00000400259 TAF1P21675 1872 aa18.53■□□□□ 0.56
CDC42-203ENST00000400259 ALX1Q15699 326 aa18.53■□□□□ 0.56
CDC42-203ENST00000400259 WWC3Q9ULE0 1092 aa18.53■□□□□ 0.56
CDC42-203ENST00000400259 NGLY1Q96IV0 654 aa18.52■□□□□ 0.56
CDC42-203ENST00000400259 H3BQV1 296 aa18.52■□□□□ 0.55
CDC42-203ENST00000400259 PRC1O43663 620 aa18.52■□□□□ 0.55
CDC42-203ENST00000400259 SF3B3Q15393 1217 aaKnown RBP18.52■□□□□ 0.55
CDC42-203ENST00000400259 IFFO2Q5TF58 517 aa18.52■□□□□ 0.55
CDC42-203ENST00000400259 FAM173BQ6P4H8 233 aa18.52■□□□□ 0.55
CDC42-203ENST00000400259 CHST3Q7LGC8 479 aa18.52■□□□□ 0.55
CDC42-203ENST00000400259 DDX11Q96FC9 970 aa18.52■□□□□ 0.55
CDC42-203ENST00000400259 C8orf37Q96NL8 207 aa18.52■□□□□ 0.55
CDC42-203ENST00000400259 CDC5LQ99459 802 aaKnown RBP18.52■□□□□ 0.55
CDC42-203ENST00000400259 NBPF3Q9H094 633 aa18.52■□□□□ 0.55
CDC42-203ENST00000400259 SBF2Q86WG5 1849 aa18.52■□□□□ 0.55
CDC42-203ENST00000400259 ANTXR2P58335 489 aa18.51■□□□□ 0.55
CDC42-203ENST00000400259 RC3H1Q5TC82 1133 aaKnown RBP18.51■□□□□ 0.55
CDC42-203ENST00000400259 STRBPQ96SI9 672 aaKnown RBP18.51■□□□□ 0.55
CDC42-203ENST00000400259 ESPNB1AK53 854 aa18.51■□□□□ 0.55
CDC42-203ENST00000400259 CCT2P78371 535 aaKnown RBP18.51■□□□□ 0.55
CDC42-203ENST00000400259 CHRNDQ07001 517 aa18.51■□□□□ 0.55
CDC42-203ENST00000400259 MAP3K12Q12852 859 aa18.51■□□□□ 0.55
CDC42-203ENST00000400259 RALYLQ86SE5 291 aaKnown RBP18.51■□□□□ 0.55
CDC42-203ENST00000400259 LEO1Q8WVC0 666 aaPredicted RBP18.51■□□□□ 0.55
CDC42-203ENST00000400259 CLCN1P35523 988 aa18.5■□□□□ 0.55
CDC42-203ENST00000400259 HS1BP3Q53T59 392 aa18.5■□□□□ 0.55
CDC42-203ENST00000400259 SPATA32Q96LK8 384 aa18.5■□□□□ 0.55
CDC42-203ENST00000400259 TPRNQ4KMQ1 711 aa18.49■□□□□ 0.55
CDC42-203ENST00000400259 FUCA2Q9BTY2 467 aa18.49■□□□□ 0.55
CDC42-203ENST00000400259 NCOA5Q9HCD5 579 aaKnown RBP18.49■□□□□ 0.55
CDC42-203ENST00000400259 CARMIL3Q8ND23 1372 aa18.49■□□□□ 0.55
CDC42-203ENST00000400259 UBAP1LF5GYI3 381 aa18.49■□□□□ 0.55
CDC42-203ENST00000400259 UVSSAQ2YD98 709 aa18.49■□□□□ 0.55
CDC42-203ENST00000400259 SLC10A5Q5PT55 438 aa18.49■□□□□ 0.55
CDC42-203ENST00000400259 ZNF804BA4D1E1 1349 aa18.49■□□□□ 0.55
CDC42-203ENST00000400259 MYH13Q9UKX3 1938 aa18.49■□□□□ 0.55
CDC42-203ENST00000400259 SNAP23O00161 211 aa18.48■□□□□ 0.55
CDC42-203ENST00000400259 ERFEQ4G0M1 354 aa18.48■□□□□ 0.55
CDC42-203ENST00000400259 ATL3Q6DD88 541 aa18.48■□□□□ 0.55
CDC42-203ENST00000400259 TBC1D10CQ8IV04 446 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms