RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 BRAPQ7Z569 592 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 TRIM4Q9C037 500 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 CSRNP2Q9H175 543 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 ZC4H2Q9NQZ6 224 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 ANKIB1Q9P2G1 1089 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 RBM27Q9P2N5 1060 aaKnown RBP9.41□□□□□ -0.9
CHD8-201ENST00000399982 RALGAPBQ86X10 1494 aa9.41□□□□□ -0.9
CHD8-201ENST00000399982 EFCAB8A8MWE9 144 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 SMIM24O75264 130 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 GIMAP6Q6P9H5 292 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 MIER3Q7Z3K6 550 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.4□□□□□ -0.9
CHD8-201ENST00000399982 CNGA1P29973 690 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 SPAG5Q96R06 1193 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 PPANQ9NQ55 473 aaKnown RBP9.4□□□□□ -0.9
CHD8-201ENST00000399982 RNF216Q9NWF9 866 aaPredicted RBP9.4□□□□□ -0.9
CHD8-201ENST00000399982 CCDC82Q8N4S0 544 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 CCDC42Q96M95 316 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 ZNF219Q9P2Y4 722 aaPredicted RBP9.4□□□□□ -0.9
CHD8-201ENST00000399982 PLCB3Q01970 1234 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 C8orf34Q49A92 452 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 XAB2Q9HCS7 855 aaKnown RBP9.4□□□□□ -0.9
CHD8-201ENST00000399982 OAS2P29728 719 aaKnown RBP9.4□□□□□ -0.9
CHD8-201ENST00000399982 VWA3BQ502W6 1294 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 SYT10Q6XYQ8 523 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 ZNF444Q8N0Y2 327 aaPredicted RBP9.4□□□□□ -0.9
CHD8-201ENST00000399982 CCHCR1Q8TD31 782 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 AIDAQ96BJ3 306 aa9.4□□□□□ -0.9
CHD8-201ENST00000399982 GUCY1B3Q02153 619 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 SNCBQ16143 134 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 CCDC62Q6P9F0 684 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 RUFY3Q7L099 469 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 CLSTN2Q9H4D0 955 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 SUPT6HQ7KZ85 1726 aaKnown RBP9.4□□□□□ -0.91
CHD8-201ENST00000399982 GIPC1O14908 333 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 ZRANB2O95218 330 aaKnown RBP eCLIP9.4□□□□□ -0.911e-12■■□□□ 14.2
CHD8-201ENST00000399982 PTGS1P23219 599 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 ATICP31939 592 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 PPP1R21Q6ZMI0 780 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 CCDC25Q86WR0 208 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 CCDC51Q96ER9 411 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 PPP1R12CQ9BZL4 782 aa9.4□□□□□ -0.91
CHD8-201ENST00000399982 TXNDC9O14530 226 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 TMTC2Q8N394 836 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 CCDC85AQ96PX6 553 aaPredicted RBP9.39□□□□□ -0.91
CHD8-201ENST00000399982 GKAP1Q5VSY0 366 aaPredicted RBP9.39□□□□□ -0.91
CHD8-201ENST00000399982 MICAL1Q8TDZ2 1067 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 SMARCC2Q8TAQ2 1214 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 ZCRB1Q8TBF4 217 aaKnown RBP9.39□□□□□ -0.91
CHD8-201ENST00000399982 EXOC4Q96A65 974 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 TRIM35Q9UPQ4 493 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 SLC4A8Q2Y0W8 1093 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 SDCCAG8Q86SQ7 713 aaPredicted RBP9.39□□□□□ -0.91
CHD8-201ENST00000399982 WIZO95785 1651 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 TIAM1Q13009 1591 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 CAMSAP2Q08AD1 1489 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 AKR1B15C9JRZ8 316 aaPredicted RBP9.39□□□□□ -0.91
CHD8-201ENST00000399982 U2AF2P26368 475 aaKnown RBP eCLIP9.39□□□□□ -0.917e-7■■■■□ 22.2
CHD8-201ENST00000399982 ISM2Q6H9L7 571 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 VAT1LQ9HCJ6 419 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 NCAPD3P42695 1498 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 RTL1A6NKG5 1358 aa9.39□□□□□ -0.91
CHD8-201ENST00000399982 IGHMBP2P38935 993 aaKnown RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 MAP3K7CLP57077 242 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 DUSP27Q5VZP5 1158 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 ATP2A3Q93084 1043 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 MCUR1Q96AQ8 359 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 SFMBT1Q9UHJ3 866 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 ANKRD36BQ8N2N9 1353 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 MYL5Q02045 173 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 LRRC23Q53EV4 343 aaPredicted RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 NUP58Q9BVL2 599 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 DACT1Q9NYF0 836 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 SLC12A7Q9Y666 1083 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 TMPOP42166 694 aaKnown RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 TMTC1Q8IUR5 882 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 TRIM47Q96LD4 638 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 CETN3O15182 167 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 HOXA7P31268 230 aaPredicted RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 PARP2Q9UGN5 583 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 CCDC194A0A1B0GVG4 234 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 CEP104O60308 925 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 SYF2O95926 243 aaKnown RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 FCHSD1Q86WN1 690 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 C16orf71Q8IYS4 520 aaPredicted RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 ACTR5Q9H9F9 607 aaPredicted RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 JRKLQ9Y4A0 524 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 AOPEPQ8N6M6 819 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 DTNBP1Q96EV8 351 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 MRPL46Q9H2W6 279 aaKnown RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 RANBP6O60518 1105 aaKnown RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 NCBP1Q09161 790 aaKnown RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 PPP2R5DQ14738 602 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 CYP26C1Q6V0L0 522 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 IQCA1Q86XH1 822 aa9.38□□□□□ -0.91
CHD8-201ENST00000399982 TSR2Q969E8 191 aaKnown RBP9.38□□□□□ -0.91
CHD8-201ENST00000399982 EXOC1Q9NV70 894 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms