RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 FAM160A1Q05DH4 1040 aa29.93■■■□□ 2.38
COL13A1-203ENST00000398969 TOM1O60784 492 aa29.93■■■□□ 2.38
COL13A1-203ENST00000398969 CCDC144BQ3MJ40 725 aa29.93■■■□□ 2.38
COL13A1-203ENST00000398969 CCDC144CPQ8IYA2 1237 aa29.93■■■□□ 2.38
COL13A1-203ENST00000398969 CHMP4CQ96CF2 233 aa29.93■■■□□ 2.38
COL13A1-203ENST00000398969 EXOC5O00471 708 aa29.92■■■□□ 2.38
COL13A1-203ENST00000398969 KINO60870 393 aaKnown RBP29.92■■■□□ 2.38
COL13A1-203ENST00000398969 FDPSP14324 419 aaKnown RBP29.92■■■□□ 2.38
COL13A1-203ENST00000398969 EVCP57679 992 aa29.92■■■□□ 2.38
COL13A1-203ENST00000398969 CACTINQ8WUQ7 758 aaKnown RBP29.92■■■□□ 2.38
COL13A1-203ENST00000398969 PIP4K2BP78356 416 aa29.92■■■□□ 2.38
COL13A1-203ENST00000398969 ME1P48163 572 aa29.91■■■□□ 2.38
COL13A1-203ENST00000398969 CEP126Q9P2H0 1117 aa29.91■■■□□ 2.38
COL13A1-203ENST00000398969 ASAP1Q9ULH1 1129 aa29.91■■■□□ 2.38
COL13A1-203ENST00000398969 FKBP4Q02790 459 aaKnown RBP eCLIP29.91■■■□□ 2.38
COL13A1-203ENST00000398969 FSIP1Q8NA03 581 aa29.91■■■□□ 2.38
COL13A1-203ENST00000398969 MRFAP1L1Q96HT8 127 aa29.9■■■□□ 2.38
COL13A1-203ENST00000398969 NWD2Q9ULI1 1742 aa29.9■■■□□ 2.38
COL13A1-203ENST00000398969 FOXP2O15409 715 aa29.89■■■□□ 2.38
COL13A1-203ENST00000398969 GPHNQ9NQX3 736 aaPredicted RBP29.89■■■□□ 2.38
COL13A1-203ENST00000398969 ITGB4P16144 1822 aa29.89■■■□□ 2.37
COL13A1-203ENST00000398969 CTIFO43310 598 aaKnown RBP29.88■■■□□ 2.37
COL13A1-203ENST00000398969 CCDC158Q5M9N0 1113 aa29.88■■■□□ 2.37
COL13A1-203ENST00000398969 CTNNA3Q9UI47 895 aa29.88■■■□□ 2.37
COL13A1-203ENST00000398969 LRRFIP1Q32MZ4 808 aaKnown RBP29.88■■■□□ 2.37
COL13A1-203ENST00000398969 C16orf45Q96MC5 204 aaPredicted RBP29.88■■■□□ 2.37
COL13A1-203ENST00000398969 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.87■■■□□ 2.37
COL13A1-203ENST00000398969 ADORA1P30542 326 aa29.87■■■□□ 2.37
COL13A1-203ENST00000398969 TTC39AQ5SRH9 613 aa29.87■■■□□ 2.37
COL13A1-203ENST00000398969 DHX40Q8IX18 779 aaKnown RBP29.87■■■□□ 2.37
COL13A1-203ENST00000398969 ISCA1Q9BUE6 129 aa29.87■■■□□ 2.37
COL13A1-203ENST00000398969 ANO10Q9NW15 660 aa29.87■■■□□ 2.37
COL13A1-203ENST00000398969 RTEL1Q9NZ71 1219 aa29.87■■■□□ 2.37
COL13A1-203ENST00000398969 PCDHA7Q9UN72 937 aa29.87■■■□□ 2.37
COL13A1-203ENST00000398969 CCDC57Q2TAC2 916 aa29.87■■■□□ 2.37
COL13A1-203ENST00000398969 WNK3Q9BYP7 1800 aa29.86■■■□□ 2.37
COL13A1-203ENST00000398969 IMMTQ16891 758 aaKnown RBP29.86■■■□□ 2.37
COL13A1-203ENST00000398969 XAGE2Q96GT9 111 aa29.86■■■□□ 2.37
COL13A1-203ENST00000398969 SPATA31A1Q5TZJ5 1347 aa29.86■■■□□ 2.37
COL13A1-203ENST00000398969 A0A087WWV3 80 aa29.85■■■□□ 2.37
COL13A1-203ENST00000398969 NUTM2BA6NNL0 878 aaPredicted RBP29.85■■■□□ 2.37
COL13A1-203ENST00000398969 BECN2A8MW95 431 aa29.85■■■□□ 2.37
COL13A1-203ENST00000398969 NUTM2EB1AL46 878 aaPredicted RBP29.85■■■□□ 2.37
COL13A1-203ENST00000398969 ZFYP08048 801 aaPredicted RBP29.85■■■□□ 2.37
COL13A1-203ENST00000398969 HAND2P61296 217 aa29.85■■■□□ 2.37
COL13A1-203ENST00000398969 WASHC4Q2M389 1173 aa29.85■■■□□ 2.37
COL13A1-203ENST00000398969 GORABQ5T7V8 394 aa29.85■■■□□ 2.37
COL13A1-203ENST00000398969 NUTM2AQ8IVF1 878 aaPredicted RBP29.85■■■□□ 2.37
COL13A1-203ENST00000398969 MRPS27Q92552 414 aaKnown RBP29.85■■■□□ 2.37
COL13A1-203ENST00000398969 AKAP2Q9Y2D5 859 aa29.85■■■□□ 2.37
COL13A1-203ENST00000398969 NRAPQ86VF7 1730 aa29.85■■■□□ 2.37
COL13A1-203ENST00000398969 FMR1NBQ8N0W7 255 aaPredicted RBP29.85■■■□□ 2.37
COL13A1-203ENST00000398969 BCL9O00512 1426 aa29.85■■■□□ 2.37
COL13A1-203ENST00000398969 LRP6O75581 1613 aa29.84■■■□□ 2.37
COL13A1-203ENST00000398969 LRRC8AQ8IWT6 810 aa29.84■■■□□ 2.37
COL13A1-203ENST00000398969 CDCA7Q9BWT1 371 aaPredicted RBP29.84■■■□□ 2.37
COL13A1-203ENST00000398969 TEX13AQ9BXU3 409 aaPredicted RBP29.84■■■□□ 2.37
COL13A1-203ENST00000398969 FBXO3Q9UK99 471 aa29.84■■■□□ 2.37
COL13A1-203ENST00000398969 ADALQ6DHV7 355 aa29.84■■■□□ 2.37
COL13A1-203ENST00000398969 FGAP02671 866 aa29.83■■■□□ 2.37
COL13A1-203ENST00000398969 MB21D2Q8IYB1 491 aaPredicted RBP29.83■■■□□ 2.37
COL13A1-203ENST00000398969 ANKRD7Q92527 254 aa29.83■■■□□ 2.37
COL13A1-203ENST00000398969 THRAP3Q9Y2W1 955 aaKnown RBP29.83■■■□□ 2.37
COL13A1-203ENST00000398969 A0A1W2PQ27 194 aa29.83■■■□□ 2.37
COL13A1-203ENST00000398969 A0A1W2PQ64 194 aa29.83■■■□□ 2.37
COL13A1-203ENST00000398969 A0A1W2PQD8 194 aa29.83■■■□□ 2.37
COL13A1-203ENST00000398969 PRC1O43663 620 aa29.83■■■□□ 2.37
COL13A1-203ENST00000398969 TNNT1P13805 278 aa29.83■■■□□ 2.37
COL13A1-203ENST00000398969 SCARF1Q14162 830 aa29.83■■■□□ 2.37
COL13A1-203ENST00000398969 OTUD7BQ6GQQ9 843 aa29.83■■■□□ 2.37
COL13A1-203ENST00000398969 CEP57L1Q8IYX8 460 aa29.83■■■□□ 2.37
COL13A1-203ENST00000398969 TCIRG1Q13488 830 aa29.82■■■□□ 2.36
COL13A1-203ENST00000398969 DNAJC10Q8IXB1 793 aa29.82■■■□□ 2.36
COL13A1-203ENST00000398969 LINC00301Q8NCQ3 95 aa29.82■■■□□ 2.36
COL13A1-203ENST00000398969 C8orf76Q96K31 380 aa29.82■■■□□ 2.36
COL13A1-203ENST00000398969 SMTNL1A8MU46 457 aa29.82■■■□□ 2.36
COL13A1-203ENST00000398969 ERCC4Q92889 916 aaPredicted RBP29.82■■■□□ 2.36
COL13A1-203ENST00000398969 HPS5Q9UPZ3 1129 aa29.82■■■□□ 2.36
COL13A1-203ENST00000398969 KAT6BQ8WYB5 2073 aa29.81■■■□□ 2.36
COL13A1-203ENST00000398969 KLF18A0A0U1RQI7 1052 aa29.81■■■□□ 2.36
COL13A1-203ENST00000398969 NEMFO60524 1076 aa29.81■■■□□ 2.36
COL13A1-203ENST00000398969 APPBP2Q92624 585 aa29.81■■■□□ 2.36
COL13A1-203ENST00000398969 DHX16O60231 1041 aaKnown RBP29.8■■■□□ 2.36
COL13A1-203ENST00000398969 ARID5BQ14865 1188 aa29.8■■■□□ 2.36
COL13A1-203ENST00000398969 PUS7LQ9H0K6 701 aaKnown RBP29.8■■■□□ 2.36
COL13A1-203ENST00000398969 CLIC4Q9Y696 253 aa29.8■■■□□ 2.36
COL13A1-203ENST00000398969 DDX60Q8IY21 1712 aaKnown RBP29.8■■■□□ 2.36
COL13A1-203ENST00000398969 A0A1B0GVL5 298 aa29.8■■■□□ 2.36
COL13A1-203ENST00000398969 GOLGA8BA8MQT2 603 aa29.8■■■□□ 2.36
COL13A1-203ENST00000398969 ZAP70P43403 619 aa29.8■■■□□ 2.36
COL13A1-203ENST00000398969 TPD52L1Q16890 204 aaPredicted RBP29.8■■■□□ 2.36
COL13A1-203ENST00000398969 ANTXR2P58335 489 aa29.79■■■□□ 2.36
COL13A1-203ENST00000398969 RBM6P78332 1123 aaKnown RBP29.79■■■□□ 2.36
COL13A1-203ENST00000398969 FBXO18Q8NFZ0 1043 aa29.79■■■□□ 2.36
COL13A1-203ENST00000398969 NAT10Q9H0A0 1025 aaKnown RBP29.79■■■□□ 2.36
COL13A1-203ENST00000398969 NDUFA8P51970 172 aa29.79■■■□□ 2.36
COL13A1-203ENST00000398969 STK38Q15208 465 aa29.79■■■□□ 2.36
COL13A1-203ENST00000398969 HSP90AB3PQ58FF7 597 aa29.79■■■□□ 2.36
COL13A1-203ENST00000398969 PPP4R3BQ5MIZ7 849 aa29.79■■■□□ 2.36
COL13A1-203ENST00000398969 SMAP1Q8IYB5 467 aaPredicted RBP29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms