RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CD2APQ9Y5K6 639 aa33.22■■■□□ 2.91
CPNE1-203ENST00000397442 BRCA1P38398 1863 aaKnown RBP33.22■■■□□ 2.91
CPNE1-203ENST00000397442 RNF113AO15541 343 aaKnown RBP33.21■■■□□ 2.91
CPNE1-203ENST00000397442 TDRD7Q8NHU6 1098 aaKnown RBP33.21■■■□□ 2.91
CPNE1-203ENST00000397442 RAD50Q92878 1312 aa33.2■■■□□ 2.91
CPNE1-203ENST00000397442 ZMYM1Q5SVZ6 1142 aa33.2■■■□□ 2.9
CPNE1-203ENST00000397442 CC2D2BQ6DHV5 1058 aa33.2■■■□□ 2.9
CPNE1-203ENST00000397442 C21orf2O43822 256 aa33.18■■■□□ 2.9
CPNE1-203ENST00000397442 ZFYP08048 801 aaPredicted RBP33.18■■■□□ 2.9
CPNE1-203ENST00000397442 SEC62Q99442 399 aaKnown RBP33.18■■■□□ 2.9
CPNE1-203ENST00000397442 RTFDC1Q9BY42 306 aaPredicted RBP33.18■■■□□ 2.9
CPNE1-203ENST00000397442 CD209Q9NNX6 404 aa33.18■■■□□ 2.9
CPNE1-203ENST00000397442 PPP1R1BQ9UD71 204 aaPredicted RBP33.18■■■□□ 2.9
CPNE1-203ENST00000397442 IDH1O75874 414 aaKnown RBP33.17■■■□□ 2.9
CPNE1-203ENST00000397442 IL1R1P14778 569 aa33.17■■■□□ 2.9
CPNE1-203ENST00000397442 RBM25P49756 843 aaKnown RBP33.17■■■□□ 2.9
CPNE1-203ENST00000397442 SPON1Q9HCB6 807 aa33.17■■■□□ 2.9
CPNE1-203ENST00000397442 ANO2Q9NQ90 1003 aa33.17■■■□□ 2.9
CPNE1-203ENST00000397442 FRAT2O75474 233 aaPredicted RBP33.17■■■□□ 2.9
CPNE1-203ENST00000397442 LRRFIP1Q32MZ4 808 aaKnown RBP33.17■■■□□ 2.9
CPNE1-203ENST00000397442 ZNF589Q86UQ0 364 aaPredicted RBP33.17■■■□□ 2.9
CPNE1-203ENST00000397442 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.17■■■□□ 2.93e-7■■■■■ 27.1
CPNE1-203ENST00000397442 LSG1Q9H089 658 aaKnown RBP33.17■■■□□ 2.9
CPNE1-203ENST00000397442 PIM2Q9P1W9 311 aa33.17■■■□□ 2.9
CPNE1-203ENST00000397442 ADD2P35612 726 aa33.16■■■□□ 2.9
CPNE1-203ENST00000397442 HELLSQ9NRZ9 838 aa33.16■■■□□ 2.9
CPNE1-203ENST00000397442 WWC3Q9ULE0 1092 aa33.16■■■□□ 2.9
CPNE1-203ENST00000397442 RIMBP2O15034 1052 aa33.14■■■□□ 2.9
CPNE1-203ENST00000397442 WASHC4Q2M389 1173 aa33.14■■■□□ 2.9
CPNE1-203ENST00000397442 MCMDC2Q4G0Z9 681 aa33.14■■■□□ 2.9
CPNE1-203ENST00000397442 SLC9C2Q5TAH2 1124 aa33.14■■■□□ 2.9
CPNE1-203ENST00000397442 ZC3H12CQ9C0D7 883 aaKnown RBP33.14■■■□□ 2.9
CPNE1-203ENST00000397442 PDE6AP16499 860 aa33.13■■■□□ 2.89
CPNE1-203ENST00000397442 ZSCAN25Q6NSZ9 544 aa33.13■■■□□ 2.89
CPNE1-203ENST00000397442 OSBP2Q969R2 916 aa33.13■■■□□ 2.89
CPNE1-203ENST00000397442 CHD4Q14839 1912 aa33.13■■■□□ 2.89
CPNE1-203ENST00000397442 TCRBV5S4A2TA0A5A2 114 aa33.13■■■□□ 2.89
CPNE1-203ENST00000397442 EPB41L2O43491 1005 aaKnown RBP33.13■■■□□ 2.89
CPNE1-203ENST00000397442 MAP3K12Q12852 859 aa33.13■■■□□ 2.89
CPNE1-203ENST00000397442 KLHL34Q8N239 644 aa33.13■■■□□ 2.89
CPNE1-203ENST00000397442 EYA3Q99504 573 aa33.13■■■□□ 2.89
CPNE1-203ENST00000397442 MAST3O60307 1309 aa33.12■■■□□ 2.89
CPNE1-203ENST00000397442 CHAF1AQ13111 956 aaPredicted RBP33.12■■■□□ 2.89
CPNE1-203ENST00000397442 UBE3CQ15386 1083 aa33.12■■■□□ 2.89
CPNE1-203ENST00000397442 APPBP2Q92624 585 aa33.12■■■□□ 2.89
CPNE1-203ENST00000397442 COA1Q9GZY4 146 aa33.12■■■□□ 2.89
CPNE1-203ENST00000397442 PTH1RQ03431 593 aa33.11■■■□□ 2.89
CPNE1-203ENST00000397442 GRIPAP1Q4V328 841 aa33.11■■■□□ 2.89
CPNE1-203ENST00000397442 CCDC93Q567U6 631 aa33.11■■■□□ 2.89
CPNE1-203ENST00000397442 CCDC129Q6ZRS4 1044 aa33.11■■■□□ 2.89
CPNE1-203ENST00000397442 LRP2BPQ9P2M1 347 aa33.11■■■□□ 2.89
CPNE1-203ENST00000397442 ABCF2Q9UG63 623 aa33.11■■■□□ 2.89
CPNE1-203ENST00000397442 JAG2Q9Y219 1238 aa33.1■■■□□ 2.89
CPNE1-203ENST00000397442 ZNF532Q9HCE3 1301 aa33.1■■■□□ 2.89
CPNE1-203ENST00000397442 M0R2C6 588 aa33.1■■■□□ 2.89
CPNE1-203ENST00000397442 KIAA1211Q6ZU35 1233 aa33.1■■■□□ 2.89
CPNE1-203ENST00000397442 CCDC171Q6TFL3 1326 aa33.09■■■□□ 2.89
CPNE1-203ENST00000397442 SALL1Q9NSC2 1324 aa33.09■■■□□ 2.89
CPNE1-203ENST00000397442 DALRD3Q5D0E6 543 aaKnown RBP33.09■■■□□ 2.89
CPNE1-203ENST00000397442 MAGEB6Q8N7X4 407 aa33.09■■■□□ 2.89
CPNE1-203ENST00000397442 PUS7LQ9H0K6 701 aaKnown RBP33.09■■■□□ 2.89
CPNE1-203ENST00000397442 GOLGB1Q14789 3259 aaKnown RBP33.08■■■□□ 2.89
CPNE1-203ENST00000397442 RTKN2Q8IZC4 609 aa33.08■■■□□ 2.89
CPNE1-203ENST00000397442 WDR66Q8TBY9 1149 aa33.08■■■□□ 2.89
CPNE1-203ENST00000397442 KIF2CQ99661 725 aa33.07■■■□□ 2.89
CPNE1-203ENST00000397442 NLGN2Q8NFZ4 835 aa33.07■■■□□ 2.88
CPNE1-203ENST00000397442 DOK7Q18PE1 504 aa33.06■■■□□ 2.88
CPNE1-203ENST00000397442 SUPT20HQ8NEM7 779 aa33.06■■■□□ 2.88
CPNE1-203ENST00000397442 ZNF384Q8TF68 577 aa33.06■■■□□ 2.88
CPNE1-203ENST00000397442 PSMD1Q99460 953 aa33.06■■■□□ 2.88
CPNE1-203ENST00000397442 RAI14Q9P0K7 980 aa33.06■■■□□ 2.88
CPNE1-203ENST00000397442 MAP4K1Q92918 833 aa33.05■■■□□ 2.88
CPNE1-203ENST00000397442 FAM205AQ6ZU69 1335 aa33.05■■■□□ 2.88
CPNE1-203ENST00000397442 PRDX5P30044 214 aa33.04■■■□□ 2.88
CPNE1-203ENST00000397442 SOGA3Q5TF21 947 aa33.04■■■□□ 2.88
CPNE1-203ENST00000397442 KIAA2012Q0VF49 1180 aa33.04■■■□□ 2.88
CPNE1-203ENST00000397442 ERICH6Q7L0X2 663 aa33.04■■■□□ 2.88
CPNE1-203ENST00000397442 MAST2Q6P0Q8 1798 aa33.03■■■□□ 2.88
CPNE1-203ENST00000397442 HSPA4P34932 840 aa33.03■■■□□ 2.88
CPNE1-203ENST00000397442 ZGPATQ8N5A5 531 aaKnown RBP33.03■■■□□ 2.88
CPNE1-203ENST00000397442 AOC3Q16853 763 aa33.02■■■□□ 2.88
CPNE1-203ENST00000397442 NSUN4Q96CB9 384 aaKnown RBP33.02■■■□□ 2.88
CPNE1-203ENST00000397442 CCDC88AQ3V6T2 1871 aa33.02■■■□□ 2.88
CPNE1-203ENST00000397442 FER1L6Q2WGJ9 1857 aa33.01■■■□□ 2.88
CPNE1-203ENST00000397442 MECOMQ03112 1051 aa33.01■■■□□ 2.88
CPNE1-203ENST00000397442 GRIK5Q16478 980 aa33.01■■■□□ 2.88
CPNE1-203ENST00000397442 VPS53Q5VIR6 699 aa33.01■■■□□ 2.88
CPNE1-203ENST00000397442 ADGRA1Q86SQ6 560 aa33.01■■■□□ 2.88
CPNE1-203ENST00000397442 DBNDD1Q9H9R9 158 aa33.01■■■□□ 2.88
CPNE1-203ENST00000397442 ANP32AP39687 249 aaKnown RBP33.01■■■□□ 2.87
CPNE1-203ENST00000397442 PODNQ7Z5L7 613 aa33.01■■■□□ 2.87
CPNE1-203ENST00000397442 PALD1Q9ULE6 856 aa33.01■■■□□ 2.87
CPNE1-203ENST00000397442 GPAA1O43292 621 aa33■■■□□ 2.87
CPNE1-203ENST00000397442 GTF2IP78347 998 aa33■■■□□ 2.87
CPNE1-203ENST00000397442 SPTY2D1Q68D10 685 aaPredicted RBP33■■■□□ 2.87
CPNE1-203ENST00000397442 RBM8AQ9Y5S9 174 aaKnown RBP33■■■□□ 2.87
CPNE1-203ENST00000397442 SCN9AQ15858 1988 aa32.99■■■□□ 2.87
CPNE1-203ENST00000397442 FOXP2O15409 715 aa32.99■■■□□ 2.87
CPNE1-203ENST00000397442 CYP7A1P22680 504 aa32.99■■■□□ 2.87
CPNE1-203ENST00000397442 IGSF3O75054 1194 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms