RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CAVIN2O95810 425 aa16.28■□□□□ 0.2
NUP98-204ENST00000397004 XPO4Q9C0E2 1151 aaKnown RBP16.28■□□□□ 0.2
NUP98-204ENST00000397004 DCCP43146 1447 aa16.28■□□□□ 0.2
NUP98-204ENST00000397004 BIN1O00499 593 aa16.28■□□□□ 0.2
NUP98-204ENST00000397004 NEUROD6Q96NK8 337 aa16.28■□□□□ 0.2
NUP98-204ENST00000397004 DSCC1Q9BVC3 393 aa16.28■□□□□ 0.2
NUP98-204ENST00000397004 KCND1Q9NSA2 647 aa16.28■□□□□ 0.2
NUP98-204ENST00000397004 FGD1P98174 961 aa16.27■□□□□ 0.2
NUP98-204ENST00000397004 OSBPL5Q9H0X9 879 aaPredicted RBP16.27■□□□□ 0.2
NUP98-204ENST00000397004 MROH7-TTC4A0A0A0MT08 1334 aa16.27■□□□□ 0.2
NUP98-204ENST00000397004 NPHP1O15259 732 aa16.27■□□□□ 0.2
NUP98-204ENST00000397004 HSP90AB3PQ58FF7 597 aa16.27■□□□□ 0.2
NUP98-204ENST00000397004 ISM2Q6H9L7 571 aa16.27■□□□□ 0.2
NUP98-204ENST00000397004 RTEL1Q9NZ71 1219 aa16.27■□□□□ 0.2
NUP98-204ENST00000397004 NAP1L2Q9ULW6 460 aaPredicted RBP16.27■□□□□ 0.2
NUP98-204ENST00000397004 CTAGE5O15320 804 aa16.27■□□□□ 0.19
NUP98-204ENST00000397004 KINO60870 393 aaKnown RBP16.27■□□□□ 0.19
NUP98-204ENST00000397004 HAND2P61296 217 aa16.27■□□□□ 0.19
NUP98-204ENST00000397004 TTLL7Q6ZT98 887 aa16.27■□□□□ 0.19
NUP98-204ENST00000397004 DDX17Q92841 729 aaKnown RBP16.27■□□□□ 0.19
NUP98-204ENST00000397004 BECN2A8MW95 431 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 WDHD1O75717 1129 aaPredicted RBP16.26■□□□□ 0.19
NUP98-204ENST00000397004 KIF20AO95235 890 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 ATP1A3P13637 1013 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 ANTXR2P58335 489 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 AXDND1Q5T1B0 1012 aaPredicted RBP16.26■□□□□ 0.19
NUP98-204ENST00000397004 ANO10Q9NW15 660 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 KIAA1468Q9P260 1216 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 CGNQ9P2M7 1197 aaKnown RBP16.26■□□□□ 0.19
NUP98-204ENST00000397004 TJP1Q07157 1748 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 EVCP57679 992 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 SCARF1Q14162 830 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 CCDC93Q567U6 631 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 CCDC73Q6ZRK6 1079 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 ZNF274Q96GC6 653 aaPredicted RBP16.26■□□□□ 0.19
NUP98-204ENST00000397004 PPP1R13BQ96KQ4 1090 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 AIFM3Q96NN9 605 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 IFNKQ9P0W0 207 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 H7C1W4 665 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 DPF2Q92785 391 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 HELLSQ9NRZ9 838 aa16.26■□□□□ 0.19
NUP98-204ENST00000397004 MRPS27Q92552 414 aaKnown RBP16.25■□□□□ 0.19
NUP98-204ENST00000397004 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
NUP98-204ENST00000397004 PROSER2Q86WR7 435 aaPredicted RBP16.25■□□□□ 0.19
NUP98-204ENST00000397004 GOLGA8FQ08AF8 430 aa16.25■□□□□ 0.19
NUP98-204ENST00000397004 GOLGA8DPQ0D2H9 430 aa16.25■□□□□ 0.19
NUP98-204ENST00000397004 UBE2Q2LH0YL09 131 aa16.24■□□□□ 0.19
NUP98-204ENST00000397004 SNRPA1P09661 255 aaKnown RBP16.24■□□□□ 0.19
NUP98-204ENST00000397004 ERCC6LQ2NKX8 1250 aa16.24■□□□□ 0.19
NUP98-204ENST00000397004 PI16Q6UXB8 463 aa16.24■□□□□ 0.19
NUP98-204ENST00000397004 NBPF3Q9H094 633 aa16.24■□□□□ 0.19
NUP98-204ENST00000397004 L2HGDHQ9H9P8 463 aa16.24■□□□□ 0.19
NUP98-204ENST00000397004 HMGB1P09429 215 aaKnown RBP16.24■□□□□ 0.19
NUP98-204ENST00000397004 ADORA1P30542 326 aa16.24■□□□□ 0.19
NUP98-204ENST00000397004 FMNL2Q96PY5 1086 aa16.24■□□□□ 0.19
NUP98-204ENST00000397004 C19orf44Q9H6X5 657 aa16.24■□□□□ 0.19
NUP98-204ENST00000397004 TMEM94Q12767 1356 aa16.24■□□□□ 0.19
NUP98-204ENST00000397004 CEP57L1Q8IYX8 460 aa16.23■□□□□ 0.19
NUP98-204ENST00000397004 NLRP2Q9NX02 1062 aa16.23■□□□□ 0.19
NUP98-204ENST00000397004 SDF4Q9BRK5 362 aa16.23■□□□□ 0.19
NUP98-204ENST00000397004 A0A1B0GUL7 405 aa16.23■□□□□ 0.19
NUP98-204ENST00000397004 NEMFO60524 1076 aa16.23■□□□□ 0.19
NUP98-204ENST00000397004 HSPA2P54652 639 aa16.23■□□□□ 0.19
NUP98-204ENST00000397004 TERF2Q15554 542 aa16.23■□□□□ 0.19
NUP98-204ENST00000397004 SYT10Q6XYQ8 523 aa16.23■□□□□ 0.19
NUP98-204ENST00000397004 TMC6Q7Z403 805 aa16.23■□□□□ 0.19
NUP98-204ENST00000397004 SENP2Q9HC62 589 aa16.23■□□□□ 0.19
NUP98-204ENST00000397004 A0A1W2PQ27 194 aa16.22■□□□□ 0.19
NUP98-204ENST00000397004 A0A1W2PQ64 194 aa16.22■□□□□ 0.19
NUP98-204ENST00000397004 A0A1W2PQD8 194 aa16.22■□□□□ 0.19
NUP98-204ENST00000397004 ZNF397Q8NF99 534 aaPredicted RBP16.22■□□□□ 0.19
NUP98-204ENST00000397004 FBXO18Q8NFZ0 1043 aa16.22■□□□□ 0.19
NUP98-204ENST00000397004 ZNF396Q96N95 335 aaPredicted RBP16.22■□□□□ 0.19
NUP98-204ENST00000397004 PUS7LQ9H0K6 701 aaKnown RBP16.22■□□□□ 0.19
NUP98-204ENST00000397004 RNF113AO15541 343 aaKnown RBP16.22■□□□□ 0.19
NUP98-204ENST00000397004 ZNF202O95125 648 aa16.22■□□□□ 0.19
NUP98-204ENST00000397004 FGAP02671 866 aa16.22■□□□□ 0.19
NUP98-204ENST00000397004 FBXL16Q8N461 479 aa16.22■□□□□ 0.19
NUP98-204ENST00000397004 PLBD2Q8NHP8 589 aa16.22■□□□□ 0.19
NUP98-204ENST00000397004 MYSM1Q5VVJ2 828 aa16.22■□□□□ 0.19
NUP98-204ENST00000397004 FOXP4Q8IVH2 680 aaPredicted RBP16.22■□□□□ 0.19
NUP98-204ENST00000397004 MB21D2Q8IYB1 491 aaPredicted RBP16.22■□□□□ 0.19
NUP98-204ENST00000397004 ERO1AQ96HE7 468 aa16.22■□□□□ 0.19
NUP98-204ENST00000397004 H2AFXP16104 143 aaPredicted RBP16.21■□□□□ 0.19
NUP98-204ENST00000397004 KRT28Q7Z3Y7 464 aa16.21■□□□□ 0.19
NUP98-204ENST00000397004 LMOD1P29536 600 aaPredicted RBP16.21■□□□□ 0.19
NUP98-204ENST00000397004 ATL3Q6DD88 541 aa16.21■□□□□ 0.19
NUP98-204ENST00000397004 TRIM65Q6PJ69 517 aa16.21■□□□□ 0.19
NUP98-204ENST00000397004 CABLES1Q8TDN4 633 aa16.21■□□□□ 0.19
NUP98-204ENST00000397004 C4AP0C0L4 1744 aa16.21■□□□□ 0.18
NUP98-204ENST00000397004 C4BP0C0L5 1744 aa16.21■□□□□ 0.18
NUP98-204ENST00000397004 PFKFB1P16118 471 aa16.21■□□□□ 0.18
NUP98-204ENST00000397004 MARCKSP29966 332 aaPredicted RBP16.21■□□□□ 0.18
NUP98-204ENST00000397004 POLR3EQ9NVU0 708 aa16.21■□□□□ 0.18
NUP98-204ENST00000397004 NUP188Q5SRE5 1749 aa16.2■□□□□ 0.18
NUP98-204ENST00000397004 COL18A1P39060 1754 aa16.2■□□□□ 0.18
NUP98-204ENST00000397004 SMC2O95347 1197 aa16.2■□□□□ 0.18
NUP98-204ENST00000397004 SLU7O95391 586 aaKnown RBP16.2■□□□□ 0.18
NUP98-204ENST00000397004 BMP6P22004 513 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms