RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 CYP21A2P08686 494 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 ADORA1P30542 326 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 SF3A1Q15459 793 aaKnown RBP10.92□□□□□ -0.66
NDE1-201ENST00000396354 TMX1Q9H3N1 280 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 BCL2L12Q9HB09 334 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 CLIP2Q9UDT6 1046 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 PI16Q6UXB8 463 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 CCDC82Q8N4S0 544 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 FAM200AQ8TCP9 573 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 PGBD1Q96JS3 809 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 WNK3Q9BYP7 1800 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 GPTP24298 496 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 ZSCAN31Q96LW9 406 aaPredicted RBP10.92□□□□□ -0.66
NDE1-201ENST00000396354 SDF4Q9BRK5 362 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 HDAC5Q9UQL6 1122 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 LAMA4Q16363 1823 aa10.92□□□□□ -0.66
NDE1-201ENST00000396354 DOT1LQ8TEK3 1739 aa10.91□□□□□ -0.66
NDE1-201ENST00000396354 BCL9O00512 1426 aa10.91□□□□□ -0.66
NDE1-201ENST00000396354 A0A0U1RQG5 324 aaPredicted RBP10.91□□□□□ -0.66
NDE1-201ENST00000396354 GOLGA6L6A8MZA4 724 aa10.91□□□□□ -0.66
NDE1-201ENST00000396354 ZRSR1Q15695 479 aaKnown RBP10.91□□□□□ -0.66
NDE1-201ENST00000396354 HAUS7Q99871 368 aa10.91□□□□□ -0.66
NDE1-201ENST00000396354 ZBTB1Q9Y2K1 713 aa10.91□□□□□ -0.66
NDE1-201ENST00000396354 A0A1B0GVL5 298 aa10.91□□□□□ -0.66
NDE1-201ENST00000396354 ATP2B1P20020 1258 aa10.91□□□□□ -0.66
NDE1-201ENST00000396354 SCARF1Q14162 830 aa10.91□□□□□ -0.66
NDE1-201ENST00000396354 MEX3CQ5U5Q3 659 aaKnown RBP10.91□□□□□ -0.66
NDE1-201ENST00000396354 STOX1Q6ZVD7 989 aa10.91□□□□□ -0.66
NDE1-201ENST00000396354 MYRIPQ8NFW9 859 aa10.91□□□□□ -0.66
NDE1-201ENST00000396354 APPP05067 770 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 SCRN1Q12765 414 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 C11orf57Q6ZUT1 292 aaPredicted RBP10.9□□□□□ -0.66
NDE1-201ENST00000396354 CCAR1Q8IX12 1150 aaKnown RBP10.9□□□□□ -0.66
NDE1-201ENST00000396354 FAM177A1Q8N128 213 aaPredicted RBP10.9□□□□□ -0.66
NDE1-201ENST00000396354 CCDC191Q8NCU4 936 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 COL4A1P02462 1669 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 PDCP20941 246 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 MCM5P33992 734 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 TCIRG1Q13488 830 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 ATP2B3Q16720 1220 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 CCDC144BQ3MJ40 725 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 PDCL2Q8N4E4 241 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 SPATA31A6Q5VVP1 1343 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 RIC1Q4ADV7 1423 aa10.9□□□□□ -0.66
NDE1-201ENST00000396354 MYO5AQ9Y4I1 1855 aaKnown RBP10.9□□□□□ -0.67
NDE1-201ENST00000396354 USP27XA6NNY8 438 aa10.9□□□□□ -0.67
NDE1-201ENST00000396354 LETM1O95202 739 aaPredicted RBP10.9□□□□□ -0.67
NDE1-201ENST00000396354 TNNT1P13805 278 aa10.9□□□□□ -0.67
NDE1-201ENST00000396354 EYA2O00167 538 aa10.89□□□□□ -0.67
NDE1-201ENST00000396354 FOXP2O15409 715 aa10.89□□□□□ -0.67
NDE1-201ENST00000396354 TAF7LQ5H9L4 462 aa10.89□□□□□ -0.67
NDE1-201ENST00000396354 A0A1B0GUL7 405 aa10.89□□□□□ -0.67
NDE1-201ENST00000396354 PTPDC1A2A3K4 754 aa10.89□□□□□ -0.67
NDE1-201ENST00000396354 SMC2O95347 1197 aa10.89□□□□□ -0.67
NDE1-201ENST00000396354 CYP19A1P11511 503 aaPredicted RBP10.89□□□□□ -0.67
NDE1-201ENST00000396354 NRAPQ86VF7 1730 aa10.89□□□□□ -0.67
NDE1-201ENST00000396354 USP28Q96RU2 1077 aa10.89□□□□□ -0.67
NDE1-201ENST00000396354 TOMM22Q9NS69 142 aa10.89□□□□□ -0.67
NDE1-201ENST00000396354 NWD2Q9ULI1 1742 aa10.89□□□□□ -0.67
NDE1-201ENST00000396354 NUP98P52948 1817 aa10.89□□□□□ -0.67
NDE1-201ENST00000396354 UBN2Q6ZU65 1347 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 MARCKSP29966 332 aaPredicted RBP10.88□□□□□ -0.67
NDE1-201ENST00000396354 FSIP1Q8NA03 581 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 KIAA1524Q8TCG1 905 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 CACTINQ8WUQ7 758 aaKnown RBP10.88□□□□□ -0.67
NDE1-201ENST00000396354 TM6SF1Q9BZW5 370 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 SCAND2PQ9GZW5 306 aaPredicted RBP10.88□□□□□ -0.67
NDE1-201ENST00000396354 KINO60870 393 aaKnown RBP10.88□□□□□ -0.67
NDE1-201ENST00000396354 USPL1Q5W0Q7 1092 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 CCDC73Q6ZRK6 1079 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 AOPEPQ8N6M6 819 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 ANKRD36CQ5JPF3 1778 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 UVSSAQ2YD98 709 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 NKX2-3Q8TAU0 364 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 FUCA2Q9BTY2 467 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 DENND2AQ9ULE3 1009 aa10.88□□□□□ -0.67
NDE1-201ENST00000396354 BCL9LQ86UU0 1499 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 MYH14Q7Z406 1995 aaKnown RBP10.87□□□□□ -0.67
NDE1-201ENST00000396354 M0R2C6 588 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 GOLGA8FQ08AF8 430 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 GOLGA8DPQ0D2H9 430 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 KBTBD3Q8NAB2 608 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 GREM2Q9H772 168 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 PAG1Q9NWQ8 432 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 TBC1D2BQ9UPU7 963 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 PALLDQ8WX93 1383 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 MAP3K15Q6ZN16 1313 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 SNAP23O00161 211 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 IFIT1P09914 478 aaKnown RBP10.87□□□□□ -0.67
NDE1-201ENST00000396354 GNL2Q13823 731 aaKnown RBP10.87□□□□□ -0.67
NDE1-201ENST00000396354 NLRP10Q86W26 655 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 GOLPH3LQ9H4A5 285 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 USP21Q9UK80 565 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 SPATA31A1Q5TZJ5 1347 aa10.87□□□□□ -0.67
NDE1-201ENST00000396354 AKAP11Q9UKA4 1901 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 CPLX1O14810 134 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 ANKRD1Q15327 319 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 TMEM87AQ8NBN3 555 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 GTF3C6Q969F1 213 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms