RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 TOP1P11387 765 aaKnown RBP21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 PIP4K2AP48426 406 aaPredicted RBP21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 GPS2Q13227 327 aa21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 TRIM65Q6PJ69 517 aa21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 KCNG4Q8TDN1 519 aa21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 ZSWIM4Q9H7M6 989 aa21.04■□□□□ 0.96
HERPUD2-202ENST00000396081 JCADQ9P266 1359 aa21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 E7EWF7 191 aa21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 RNMTO43148 476 aaKnown RBP21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 TNNT3P45378 269 aaPredicted RBP21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 SMC1AQ14683 1233 aaKnown RBP21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 A0A1W2PQ27 194 aa21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 A0A1W2PQ64 194 aa21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 A0A1W2PQD8 194 aa21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 FANCGO15287 622 aa21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 SASH3O75995 380 aa21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 TUBB4AP04350 444 aa21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 TXLNBQ8N3L3 684 aa21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 EFCAB8A8MWE9 144 aa21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 FDPSP14324 419 aaKnown RBP21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 TTLL5Q6EMB2 1281 aa21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 SRRTQ9BXP5 876 aaKnown RBP21.03■□□□□ 0.96
HERPUD2-202ENST00000396081 TMEM232C9JQI7 657 aa21.02■□□□□ 0.96
HERPUD2-202ENST00000396081 PFKFB1P16118 471 aa21.02■□□□□ 0.96
HERPUD2-202ENST00000396081 HAND2P61296 217 aa21.02■□□□□ 0.96
HERPUD2-202ENST00000396081 PARP3Q9Y6F1 533 aa21.02■□□□□ 0.96
HERPUD2-202ENST00000396081 CASQ1P31415 396 aa21.02■□□□□ 0.96
HERPUD2-202ENST00000396081 FEZ2Q9UHY8 353 aaPredicted RBP21.02■□□□□ 0.96
HERPUD2-202ENST00000396081 SLC39A6Q13433 755 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 UBE3BQ7Z3V4 1068 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 DDX21Q9NR30 783 aaKnown RBP eCLIP21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 NWD1Q149M9 1564 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 TNRQ92752 1358 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 NEURL1BA8MQ27 555 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 CPLX1O14810 134 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 TBC1D8O95759 1140 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 GCKRQ14397 625 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 XAGE3Q8WTP9 111 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 BPIFA3Q9BQP9 254 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 ZSCAN12O43309 604 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 KCNJ6P48051 423 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 EXOSC10Q01780 885 aaKnown RBP21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 DHX8Q14562 1220 aaKnown RBP21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 CCDC158Q5M9N0 1113 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 MYSM1Q5VVJ2 828 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 REXO1L1PQ8IX06 675 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 ARFGAP3Q9NP61 516 aa21.01■□□□□ 0.95
HERPUD2-202ENST00000396081 TPM1P09493 284 aa21■□□□□ 0.95
HERPUD2-202ENST00000396081 LMAN1P49257 510 aa21■□□□□ 0.95
HERPUD2-202ENST00000396081 CC2D1AQ6P1N0 951 aaPredicted RBP21■□□□□ 0.95
HERPUD2-202ENST00000396081 COPS6Q7L5N1 327 aa21■□□□□ 0.95
HERPUD2-202ENST00000396081 KBTBD3Q8NAB2 608 aa21■□□□□ 0.95
HERPUD2-202ENST00000396081 WDR24Q96S15 920 aa21■□□□□ 0.95
HERPUD2-202ENST00000396081 CCDC191Q8NCU4 936 aa21■□□□□ 0.95
HERPUD2-202ENST00000396081 IP6K1Q92551 441 aa21■□□□□ 0.95
HERPUD2-202ENST00000396081 HAUS7Q99871 368 aa21■□□□□ 0.95
HERPUD2-202ENST00000396081 PPP2R2CQ9Y2T4 447 aa21■□□□□ 0.95
HERPUD2-202ENST00000396081 CBFA2T2O43439 604 aa20.99■□□□□ 0.95
HERPUD2-202ENST00000396081 PTPN12Q05209 780 aaKnown RBP20.99■□□□□ 0.95
HERPUD2-202ENST00000396081 PPP2R3AQ06190 1150 aa20.99■□□□□ 0.95
HERPUD2-202ENST00000396081 ZSCAN26Q16670 478 aa20.99■□□□□ 0.95
HERPUD2-202ENST00000396081 SYKP43405 635 aa20.99■□□□□ 0.95
HERPUD2-202ENST00000396081 C10orf67Q8IYJ2 551 aa20.99■□□□□ 0.95
HERPUD2-202ENST00000396081 ATP5J2-PTCD1G3V325 749 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 PTCD1O75127 700 aaKnown RBP20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 MYL5Q02045 173 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 PNOCQ13519 176 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 EID1Q9Y6B2 187 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 HSPD1P10809 573 aaKnown RBP20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 KARSQ15046 597 aaKnown RBP20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 ZNF274Q96GC6 653 aaPredicted RBP20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 FANCLQ9NW38 375 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 UTYO14607 1347 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 SALL1Q9NSC2 1324 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 GOLGA8BA8MQT2 603 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 YEATS4O95619 227 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 ANO1Q5XXA6 986 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 IPO4Q8TEX9 1081 aaKnown RBP20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 COPRSQ9NQ92 184 aa20.98■□□□□ 0.95
HERPUD2-202ENST00000396081 TOPAZ1Q8N9V7 1692 aa20.97■□□□□ 0.95
HERPUD2-202ENST00000396081 VWA3AA6NCI4 1184 aa20.97■□□□□ 0.95
HERPUD2-202ENST00000396081 TIMM10P62072 90 aa20.97■□□□□ 0.95
HERPUD2-202ENST00000396081 PARD6BQ9BYG5 372 aa20.97■□□□□ 0.95
HERPUD2-202ENST00000396081 TSPYL1Q9H0U9 437 aa20.97■□□□□ 0.95
HERPUD2-202ENST00000396081 NEDD4P46934 1319 aa20.97■□□□□ 0.95
HERPUD2-202ENST00000396081 KLF18A0A0U1RQI7 1052 aa20.97■□□□□ 0.95
HERPUD2-202ENST00000396081 OLFM4Q6UX06 510 aa20.97■□□□□ 0.95
HERPUD2-202ENST00000396081 PAG1Q9NWQ8 432 aa20.97■□□□□ 0.95
HERPUD2-202ENST00000396081 KIF28PB7ZC32 967 aa20.96■□□□□ 0.95
HERPUD2-202ENST00000396081 POLR3EQ9NVU0 708 aa20.96■□□□□ 0.95
HERPUD2-202ENST00000396081 WDHD1O75717 1129 aaPredicted RBP20.96■□□□□ 0.95
HERPUD2-202ENST00000396081 PSME1Q06323 249 aa20.96■□□□□ 0.95
HERPUD2-202ENST00000396081 GPR161Q8N6U8 529 aaKnown RBP20.96■□□□□ 0.95
HERPUD2-202ENST00000396081 FBXO18Q8NFZ0 1043 aa20.96■□□□□ 0.95
HERPUD2-202ENST00000396081 DESI2Q9BSY9 194 aa20.96■□□□□ 0.95
HERPUD2-202ENST00000396081 HSD3B7Q9H2F3 369 aa20.96■□□□□ 0.95
HERPUD2-202ENST00000396081 IKBKBO14920 756 aa20.96■□□□□ 0.95
HERPUD2-202ENST00000396081 ADKP55263 362 aaKnown RBP20.96■□□□□ 0.95
HERPUD2-202ENST00000396081 AK7Q96M32 723 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms