RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ARID5AQ03989 594 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 ZSCAN23Q3MJ62 389 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 LRSAM1Q6UWE0 723 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 CCNL1Q9UK58 526 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-203ENST00000394872 DENND2AQ9ULE3 1009 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 NPATQ14207 1427 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 UFL1O94874 794 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 APOBRQ0VD83 1088 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 TAF12Q16514 161 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 CEP112Q8N8E3 955 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 SREK1Q8WXA9 508 aaKnown RBP11.78□□□□□ -0.52
COL4A6-203ENST00000394872 HSF2BPO75031 334 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 HOXC9P31274 260 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 CKAP4Q07065 602 aaKnown RBP11.78□□□□□ -0.52
COL4A6-203ENST00000394872 SPAG1Q07617 926 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 PICK1Q9NRD5 415 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 TRPM2O94759 1503 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 CCDC155Q8N6L0 562 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 SH2D4AQ9H788 454 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 WDR70Q9NW82 654 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 PTGS1P23219 599 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
COL4A6-203ENST00000394872 PRPHP41219 470 aa11.77□□□□□ -0.52
COL4A6-203ENST00000394872 TEX11Q8IYF3 940 aa11.77□□□□□ -0.52
COL4A6-203ENST00000394872 RBM28Q9NW13 759 aaKnown RBP11.77□□□□□ -0.52
COL4A6-203ENST00000394872 RASAL2Q9UJF2 1139 aa11.77□□□□□ -0.52
COL4A6-203ENST00000394872 RTL1A6NKG5 1358 aa11.77□□□□□ -0.52
COL4A6-203ENST00000394872 GSTA5Q7RTV2 222 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 USP48Q86UV5 1035 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 GIMAP7Q8NHV1 300 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 TMOD4Q9NZQ9 345 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 HCLS1P14317 486 aaPredicted RBP11.77□□□□□ -0.53
COL4A6-203ENST00000394872 EYA1Q99502 592 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 PKD2L1Q9P0L9 805 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 RXRAP19793 462 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 SPECC1LQ69YQ0 1117 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 HS2ST1Q7LGA3 356 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 KIF4AO95239 1232 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 AOPEPQ8N6M6 819 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 ZKSCAN3Q9BRR0 538 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 ZNF408Q9H9D4 720 aa11.77□□□□□ -0.53
COL4A6-203ENST00000394872 EIF4G3O43432 1585 aaKnown RBP11.77□□□□□ -0.53
COL4A6-203ENST00000394872 SPTLC2O15270 562 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 DTHD1Q6ZMT9 781 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 IP6K1Q92551 441 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 CREB3L3Q68CJ9 461 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 CCDC50Q8IVM0 306 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 BICDL2A1A5D9 508 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 MBD4O95243 580 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 PLIN2Q99541 437 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 YTHDC2Q9H6S0 1430 aaKnown RBP11.76□□□□□ -0.53
COL4A6-203ENST00000394872 GPCPD1Q9NPB8 672 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 CCDC171Q6TFL3 1326 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 ATP10BO94823 1461 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 IQCGQ9H095 443 aaKnown RBP11.76□□□□□ -0.53
COL4A6-203ENST00000394872 CEP83Q9Y592 693 aa11.76□□□□□ -0.53
COL4A6-203ENST00000394872 EIF2AK4Q9P2K8 1649 aaKnown RBP11.76□□□□□ -0.53
COL4A6-203ENST00000394872 F13A1P00488 732 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 CDCA7Q9BWT1 371 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-203ENST00000394872 PCDHB15Q9Y5E8 787 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 TERF1P54274 439 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 KLHL40Q2TBA0 621 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 CEP85Q6P2H3 762 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 DNM1Q05193 864 aaKnown RBP11.75□□□□□ -0.53
COL4A6-203ENST00000394872 MSANTD4Q8NCY6 345 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 PAIP2Q9BPZ3 127 aaKnown RBP11.75□□□□□ -0.53
COL4A6-203ENST00000394872 NEK11Q8NG66 645 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 RNF216Q9NWF9 866 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-203ENST00000394872 ITGA6P23229 1130 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 KRT24Q2M2I5 525 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 APBB1IPQ7Z5R6 666 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-203ENST00000394872 LMBR1Q8WVP7 490 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 KCNA6P17658 529 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 HIBADHP31937 336 aaKnown RBP11.75□□□□□ -0.53
COL4A6-203ENST00000394872 FAM89AQ96GI7 184 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 NAP1L4Q99733 375 aaKnown RBP11.75□□□□□ -0.53
COL4A6-203ENST00000394872 DACT1Q9NYF0 836 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 GGA1Q9UJY5 639 aa11.75□□□□□ -0.53
COL4A6-203ENST00000394872 NUP160Q12769 1436 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 TACC1O75410 805 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 ARHGEF10LQ9HCE6 1279 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 PAXBP1Q9Y5B6 917 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 C6orf163Q5TEZ5 329 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 TSPYL6Q8N831 410 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 ZFYVE9O95405 1425 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 UBXN1Q04323 297 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 FAM107BQ9H098 131 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 PARP10Q53GL7 1025 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 DNAJC25Q9H1X3 360 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 PTPDC1A2A3K4 754 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 PLCB3Q01970 1234 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 DHX32Q7L7V1 743 aaKnown RBP11.74□□□□□ -0.53
COL4A6-203ENST00000394872 PRDM10Q9NQV6 1147 aa11.74□□□□□ -0.53
COL4A6-203ENST00000394872 RUFY3Q7L099 469 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 NOD1Q9Y239 953 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 AK2P54819 239 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 EIF6P56537 245 aaKnown RBP11.73□□□□□ -0.53
COL4A6-203ENST00000394872 TICAM2Q86XR7 235 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 HELLSQ9NRZ9 838 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 PUM3Q15397 648 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms