RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 APPBP2Q92624 585 aa22.95■■□□□ 1.27
RCCD1-201ENST00000394258 DDX19AQ9NUU7 478 aaKnown RBP22.95■■□□□ 1.27
RCCD1-201ENST00000394258 CTNNA3Q9UI47 895 aa22.95■■□□□ 1.27
RCCD1-201ENST00000394258 ZFYP08048 801 aaPredicted RBP22.95■■□□□ 1.26
RCCD1-201ENST00000394258 USP28Q96RU2 1077 aa22.95■■□□□ 1.26
RCCD1-201ENST00000394258 FBXO3Q9UK99 471 aa22.95■■□□□ 1.26
RCCD1-201ENST00000394258 IDH1O75874 414 aaKnown RBP22.95■■□□□ 1.26
RCCD1-201ENST00000394258 ZNF274Q96GC6 653 aaPredicted RBP22.95■■□□□ 1.26
RCCD1-201ENST00000394258 DENND2AQ9ULE3 1009 aa22.95■■□□□ 1.26
RCCD1-201ENST00000394258 PRC1O43663 620 aa22.94■■□□□ 1.26
RCCD1-201ENST00000394258 SLC9C2Q5TAH2 1124 aa22.94■■□□□ 1.26
RCCD1-201ENST00000394258 NAA16Q6N069 864 aaPredicted RBP22.94■■□□□ 1.26
RCCD1-201ENST00000394258 DNAJC25Q9H1X3 360 aa22.94■■□□□ 1.26
RCCD1-201ENST00000394258 ABCA3Q99758 1704 aa22.94■■□□□ 1.26
RCCD1-201ENST00000394258 FDPSP14324 419 aaKnown RBP22.94■■□□□ 1.26
RCCD1-201ENST00000394258 A0A087WWV3 80 aa22.93■■□□□ 1.26
RCCD1-201ENST00000394258 SNAP23O00161 211 aa22.93■■□□□ 1.26
RCCD1-201ENST00000394258 APPP05067 770 aa22.93■■□□□ 1.26
RCCD1-201ENST00000394258 RIC1Q4ADV7 1423 aa22.93■■□□□ 1.26
RCCD1-201ENST00000394258 PODXL2Q9NZ53 605 aa22.93■■□□□ 1.26
RCCD1-201ENST00000394258 STRCQ7RTU9 1775 aa22.93■■□□□ 1.26
RCCD1-201ENST00000394258 KLF18A0A0U1RQI7 1052 aa22.93■■□□□ 1.26
RCCD1-201ENST00000394258 ZNF213O14771 459 aa22.93■■□□□ 1.26
RCCD1-201ENST00000394258 DZIP3Q86Y13 1208 aaKnown RBP22.93■■□□□ 1.26
RCCD1-201ENST00000394258 GJB4Q9NTQ9 266 aa22.93■■□□□ 1.26
RCCD1-201ENST00000394258 KIF3AQ9Y496 699 aa22.93■■□□□ 1.26
RCCD1-201ENST00000394258 EXOC5O00471 708 aa22.92■■□□□ 1.26
RCCD1-201ENST00000394258 PTGS1P23219 599 aa22.92■■□□□ 1.26
RCCD1-201ENST00000394258 CCAR1Q8IX12 1150 aaKnown RBP22.92■■□□□ 1.26
RCCD1-201ENST00000394258 SALL1Q9NSC2 1324 aa22.91■■□□□ 1.26
RCCD1-201ENST00000394258 PHKA1P46020 1223 aa22.91■■□□□ 1.26
RCCD1-201ENST00000394258 RALYLQ86SE5 291 aaKnown RBP22.91■■□□□ 1.26
RCCD1-201ENST00000394258 TICAM2Q86XR7 235 aa22.91■■□□□ 1.26
RCCD1-201ENST00000394258 PIH1D3Q9NQM4 214 aaKnown RBP22.91■■□□□ 1.26
RCCD1-201ENST00000394258 NRBP1Q9UHY1 535 aa22.91■■□□□ 1.26
RCCD1-201ENST00000394258 CARMIL3Q8ND23 1372 aa22.91■■□□□ 1.26
RCCD1-201ENST00000394258 GOLGA8BA8MQT2 603 aa22.91■■□□□ 1.26
RCCD1-201ENST00000394258 RBM43Q6ZSC3 357 aaKnown RBP22.91■■□□□ 1.26
RCCD1-201ENST00000394258 ILDR1Q86SU0 546 aaPredicted RBP22.91■■□□□ 1.26
RCCD1-201ENST00000394258 NKX2-3Q8TAU0 364 aa22.91■■□□□ 1.26
RCCD1-201ENST00000394258 MAP7D2Q96T17 732 aa22.91■■□□□ 1.26
RCCD1-201ENST00000394258 GOLPH3LQ9H4A5 285 aa22.91■■□□□ 1.26
RCCD1-201ENST00000394258 CDHR2Q9BYE9 1310 aa22.9■■□□□ 1.26
RCCD1-201ENST00000394258 ANTXR2P58335 489 aa22.9■■□□□ 1.26
RCCD1-201ENST00000394258 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.9■■□□□ 1.267e-7■■■□□ 16.2
RCCD1-201ENST00000394258 POLR3DP05423 398 aaPredicted RBP22.9■■□□□ 1.26
RCCD1-201ENST00000394258 ME1P48163 572 aa22.9■■□□□ 1.26
RCCD1-201ENST00000394258 NCOA7Q8NI08 942 aa22.9■■□□□ 1.26
RCCD1-201ENST00000394258 RCOR1Q9UKL0 485 aa22.9■■□□□ 1.26
RCCD1-201ENST00000394258 UBN2Q6ZU65 1347 aa22.9■■□□□ 1.26
RCCD1-201ENST00000394258 PDE8BO95263 885 aa22.89■■□□□ 1.26
RCCD1-201ENST00000394258 MB21D2Q8IYB1 491 aaPredicted RBP22.89■■□□□ 1.26
RCCD1-201ENST00000394258 KIAA1524Q8TCG1 905 aa22.89■■□□□ 1.26
RCCD1-201ENST00000394258 BCL9O00512 1426 aa22.89■■□□□ 1.26
RCCD1-201ENST00000394258 ZNF165P49910 485 aa22.89■■□□□ 1.25
RCCD1-201ENST00000394258 CCDC102BQ68D86 513 aa22.89■■□□□ 1.25
RCCD1-201ENST00000394258 ERCC4Q92889 916 aaPredicted RBP22.89■■□□□ 1.25
RCCD1-201ENST00000394258 ADD2P35612 726 aa22.88■■□□□ 1.25
RCCD1-201ENST00000394258 VGLL2Q8N8G2 317 aa22.88■■□□□ 1.25
RCCD1-201ENST00000394258 SPTLC3Q9NUV7 552 aa22.88■■□□□ 1.25
RCCD1-201ENST00000394258 ITGB4P16144 1822 aa22.88■■□□□ 1.25
RCCD1-201ENST00000394258 KDM4FA0A1W2PPD8 638 aa22.88■■□□□ 1.25
RCCD1-201ENST00000394258 DYNC1I1O14576 645 aa22.88■■□□□ 1.25
RCCD1-201ENST00000394258 PDE8AO60658 829 aa22.88■■□□□ 1.25
RCCD1-201ENST00000394258 RXRAP19793 462 aa22.88■■□□□ 1.25
RCCD1-201ENST00000394258 HPS5Q9UPZ3 1129 aa22.88■■□□□ 1.25
RCCD1-201ENST00000394258 NWD2Q9ULI1 1742 aa22.87■■□□□ 1.25
RCCD1-201ENST00000394258 CPLX1O14810 134 aa22.87■■□□□ 1.25
RCCD1-201ENST00000394258 LRMPQ12912 555 aa22.87■■□□□ 1.25
RCCD1-201ENST00000394258 FBXW7Q969H0 707 aa22.87■■□□□ 1.25
RCCD1-201ENST00000394258 TRIM5Q9C035 493 aa22.87■■□□□ 1.25
RCCD1-201ENST00000394258 ORC3Q9UBD5 711 aaPredicted RBP22.87■■□□□ 1.25
RCCD1-201ENST00000394258 SPEF2Q9C093 1822 aa22.87■■□□□ 1.25
RCCD1-201ENST00000394258 A0A0U1RQG5 324 aaPredicted RBP22.87■■□□□ 1.25
RCCD1-201ENST00000394258 CCDC186Q7Z3E2 898 aa22.87■■□□□ 1.25
RCCD1-201ENST00000394258 DRC7Q8IY82 874 aa22.87■■□□□ 1.25
RCCD1-201ENST00000394258 ACSBG1Q96GR2 724 aa22.87■■□□□ 1.25
RCCD1-201ENST00000394258 ZNF396Q96N95 335 aaPredicted RBP22.87■■□□□ 1.25
RCCD1-201ENST00000394258 WWC3Q9ULE0 1092 aa22.87■■□□□ 1.25
RCCD1-201ENST00000394258 ZNF532Q9HCE3 1301 aa22.87■■□□□ 1.25
RCCD1-201ENST00000394258 KLHL34Q8N239 644 aa22.86■■□□□ 1.25
RCCD1-201ENST00000394258 NBPF3Q9H094 633 aa22.86■■□□□ 1.25
RCCD1-201ENST00000394258 INCENPQ9NQS7 918 aa22.86■■□□□ 1.25
RCCD1-201ENST00000394258 C11orf57Q6ZUT1 292 aaPredicted RBP22.86■■□□□ 1.25
RCCD1-201ENST00000394258 C8orf76Q96K31 380 aa22.86■■□□□ 1.25
RCCD1-201ENST00000394258 CCDC73Q6ZRK6 1079 aa22.85■■□□□ 1.25
RCCD1-201ENST00000394258 TBC1D10CQ8IV04 446 aa22.85■■□□□ 1.25
RCCD1-201ENST00000394258 EVCP57679 992 aa22.85■■□□□ 1.25
RCCD1-201ENST00000394258 TRDNQ13061 729 aa22.85■■□□□ 1.25
RCCD1-201ENST00000394258 MYRIPQ8NFW9 859 aa22.85■■□□□ 1.25
RCCD1-201ENST00000394258 FSIP1Q8NA03 581 aa22.85■■□□□ 1.25
RCCD1-201ENST00000394258 SEC31BQ9NQW1 1179 aa22.85■■□□□ 1.25
RCCD1-201ENST00000394258 ZNF75DP51815 510 aa22.84■■□□□ 1.25
RCCD1-201ENST00000394258 SNW1Q13573 536 aaKnown RBP22.84■■□□□ 1.25
RCCD1-201ENST00000394258 CCDC144CPQ8IYA2 1237 aa22.84■■□□□ 1.25
RCCD1-201ENST00000394258 DNAJC5Q9H3Z4 198 aa22.84■■□□□ 1.25
RCCD1-201ENST00000394258 MYH15Q9Y2K3 1946 aa22.84■■□□□ 1.25
RCCD1-201ENST00000394258 PDE6AP16499 860 aa22.84■■□□□ 1.25
RCCD1-201ENST00000394258 SUSD4Q5VX71 490 aa22.84■■□□□ 1.25
RCCD1-201ENST00000394258 ZSCAN25Q6NSZ9 544 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 273.9 ms