RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 TNRC6CQ9HCJ0 1690 aaKnown RBP26.4■■□□□ 1.82
HMGA2-203ENST00000393578 PTMSP20962 102 aa26.4■■□□□ 1.82
HMGA2-203ENST00000393578 WWC3Q9ULE0 1092 aa26.4■■□□□ 1.82
HMGA2-203ENST00000393578 TPCN1Q9ULQ1 816 aa26.4■■□□□ 1.82
HMGA2-203ENST00000393578 BAG4O95429 457 aaKnown RBP26.39■■□□□ 1.82
HMGA2-203ENST00000393578 TOB2Q14106 344 aaPredicted RBP26.39■■□□□ 1.82
HMGA2-203ENST00000393578 ME3Q16798 604 aa26.39■■□□□ 1.82
HMGA2-203ENST00000393578 CAVIN4Q5BKX8 364 aa26.39■■□□□ 1.82
HMGA2-203ENST00000393578 STOX1Q6ZVD7 989 aa26.39■■□□□ 1.82
HMGA2-203ENST00000393578 RXRBP28702 533 aa26.38■■□□□ 1.81
HMGA2-203ENST00000393578 PRR5LQ6MZQ0 368 aa26.38■■□□□ 1.81
HMGA2-203ENST00000393578 TCEANC2Q96MN5 208 aa26.38■■□□□ 1.81
HMGA2-203ENST00000393578 BRD1O95696 1058 aa26.38■■□□□ 1.81
HMGA2-203ENST00000393578 FGAP02671 866 aa26.38■■□□□ 1.81
HMGA2-203ENST00000393578 E7EWF7 191 aa26.37■■□□□ 1.81
HMGA2-203ENST00000393578 GYG1P46976 350 aa26.37■■□□□ 1.81
HMGA2-203ENST00000393578 IMMTQ16891 758 aaKnown RBP26.37■■□□□ 1.81
HMGA2-203ENST00000393578 GOLGA6L22H0YM25 854 aa26.37■■□□□ 1.81
HMGA2-203ENST00000393578 GSE1Q14687 1217 aa26.37■■□□□ 1.81
HMGA2-203ENST00000393578 DHX32Q7L7V1 743 aaKnown RBP26.37■■□□□ 1.81
HMGA2-203ENST00000393578 WTIPA6NIX2 430 aaPredicted RBP26.36■■□□□ 1.81
HMGA2-203ENST00000393578 TTLL5Q6EMB2 1281 aa26.36■■□□□ 1.81
HMGA2-203ENST00000393578 CCDC83Q8IWF9 413 aa26.36■■□□□ 1.81
HMGA2-203ENST00000393578 SMC3Q9UQE7 1217 aa26.36■■□□□ 1.81
HMGA2-203ENST00000393578 VPS37DQ86XT2 251 aa26.35■■□□□ 1.81
HMGA2-203ENST00000393578 MAGEB6Q8N7X4 407 aa26.35■■□□□ 1.81
HMGA2-203ENST00000393578 FAM84BQ96KN1 310 aaPredicted RBP26.35■■□□□ 1.81
HMGA2-203ENST00000393578 A0A0G2JLW4 131 aa26.35■■□□□ 1.81
HMGA2-203ENST00000393578 TRAK2O60296 914 aa26.35■■□□□ 1.81
HMGA2-203ENST00000393578 APBA3O96018 575 aa26.35■■□□□ 1.81
HMGA2-203ENST00000393578 SERPINB2P05120 415 aa26.35■■□□□ 1.81
HMGA2-203ENST00000393578 ST5P78524 1137 aa26.35■■□□□ 1.81
HMGA2-203ENST00000393578 GRAPQ13588 217 aa26.35■■□□□ 1.81
HMGA2-203ENST00000393578 GRAPLQ8TC17 118 aaPredicted RBP26.35■■□□□ 1.81
HMGA2-203ENST00000393578 DEKP35659 375 aaKnown RBP26.34■■□□□ 1.81
HMGA2-203ENST00000393578 FBXO33Q7Z6M2 555 aa26.34■■□□□ 1.81
HMGA2-203ENST00000393578 AIDAQ96BJ3 306 aa26.34■■□□□ 1.81
HMGA2-203ENST00000393578 LAMA4Q16363 1823 aa26.33■■□□□ 1.81
HMGA2-203ENST00000393578 Q6ZUG5 572 aa26.33■■□□□ 1.81
HMGA2-203ENST00000393578 STRBPQ96SI9 672 aaKnown RBP26.33■■□□□ 1.81
HMGA2-203ENST00000393578 WDR33Q9C0J8 1336 aaKnown RBP26.33■■□□□ 1.81
HMGA2-203ENST00000393578 SEMA3EO15041 775 aa26.33■■□□□ 1.8
HMGA2-203ENST00000393578 EXOSC10Q01780 885 aaKnown RBP26.33■■□□□ 1.8
HMGA2-203ENST00000393578 ST3GAL1Q11201 340 aa26.33■■□□□ 1.8
HMGA2-203ENST00000393578 LRP2BPQ9P2M1 347 aa26.33■■□□□ 1.8
HMGA2-203ENST00000393578 DENND2AQ9ULE3 1009 aa26.33■■□□□ 1.8
HMGA2-203ENST00000393578 CRY2Q49AN0 593 aa26.32■■□□□ 1.8
HMGA2-203ENST00000393578 NECAB1Q8N987 351 aa26.32■■□□□ 1.8
HMGA2-203ENST00000393578 TFCP2L1Q9NZI6 479 aa26.32■■□□□ 1.8
HMGA2-203ENST00000393578 IQSEC3Q9UPP2 1182 aaPredicted RBP26.32■■□□□ 1.8
HMGA2-203ENST00000393578 ZNF213O14771 459 aa26.31■■□□□ 1.8
HMGA2-203ENST00000393578 RPGRQ92834 1020 aaKnown RBP26.31■■□□□ 1.8
HMGA2-203ENST00000393578 FGD1P98174 961 aa26.3■■□□□ 1.8
HMGA2-203ENST00000393578 SKOR2Q2VWA4 1001 aaPredicted RBP26.3■■□□□ 1.8
HMGA2-203ENST00000393578 AKT1S1Q96B36 256 aa26.3■■□□□ 1.8
HMGA2-203ENST00000393578 AGXT2Q9BYV1 514 aa26.3■■□□□ 1.8
HMGA2-203ENST00000393578 PDS5AQ29RF7 1337 aaKnown RBP26.3■■□□□ 1.8
HMGA2-203ENST00000393578 COL1A1P02452 1464 aaPredicted RBP26.29■■□□□ 1.8
HMGA2-203ENST00000393578 POLRMTO00411 1230 aaKnown RBP26.29■■□□□ 1.8
HMGA2-203ENST00000393578 DDR1Q08345 913 aa26.29■■□□□ 1.8
HMGA2-203ENST00000393578 ZMYM6O95789 1325 aa26.29■■□□□ 1.8
HMGA2-203ENST00000393578 APPP05067 770 aa26.29■■□□□ 1.8
HMGA2-203ENST00000393578 GJB2P29033 226 aa26.29■■□□□ 1.8
HMGA2-203ENST00000393578 HAND2P61296 217 aa26.29■■□□□ 1.8
HMGA2-203ENST00000393578 ALX1Q15699 326 aa26.29■■□□□ 1.8
HMGA2-203ENST00000393578 ZNF827Q17R98 1081 aa26.29■■□□□ 1.8
HMGA2-203ENST00000393578 TNS1Q9HBL0 1735 aaKnown RBP26.29■■□□□ 1.8
HMGA2-203ENST00000393578 ZBTB22O15209 634 aa26.28■■□□□ 1.8
HMGA2-203ENST00000393578 MBD4O95243 580 aa26.28■■□□□ 1.8
HMGA2-203ENST00000393578 KLRK1P26718 216 aa26.28■■□□□ 1.8
HMGA2-203ENST00000393578 HIBADHP31937 336 aaKnown RBP26.28■■□□□ 1.8
HMGA2-203ENST00000393578 MCTP1Q6DN14 999 aa26.28■■□□□ 1.8
HMGA2-203ENST00000393578 FBXL16Q8N461 479 aa26.28■■□□□ 1.8
HMGA2-203ENST00000393578 BRF1Q92994 677 aa26.28■■□□□ 1.8
HMGA2-203ENST00000393578 PATL2C9JE40 543 aaKnown RBP26.27■■□□□ 1.8
HMGA2-203ENST00000393578 SYT1P21579 422 aa26.27■■□□□ 1.8
HMGA2-203ENST00000393578 RGS17Q9UGC6 210 aaPredicted RBP26.27■■□□□ 1.8
HMGA2-203ENST00000393578 PNPLA7Q6ZV29 1317 aa26.27■■□□□ 1.8
HMGA2-203ENST00000393578 STX6O43752 255 aa26.27■■□□□ 1.8
HMGA2-203ENST00000393578 GNAT2P19087 354 aa26.27■■□□□ 1.8
HMGA2-203ENST00000393578 FOXD4L5Q5VV16 416 aaPredicted RBP26.27■■□□□ 1.8
HMGA2-203ENST00000393578 FOXD4L4Q8WXT5 416 aaPredicted RBP26.27■■□□□ 1.8
HMGA2-203ENST00000393578 ABCF2Q9UG63 623 aa26.27■■□□□ 1.8
HMGA2-203ENST00000393578 LEMD3Q9Y2U8 911 aa26.27■■□□□ 1.8
HMGA2-203ENST00000393578 PDIA4P13667 645 aaKnown RBP26.26■■□□□ 1.79
HMGA2-203ENST00000393578 FLAD1Q8NFF5 587 aa26.26■■□□□ 1.79
HMGA2-203ENST00000393578 GTF3C6Q969F1 213 aa26.26■■□□□ 1.79
HMGA2-203ENST00000393578 RBM17Q96I25 401 aaKnown RBP26.26■■□□□ 1.79
HMGA2-203ENST00000393578 LRRC2Q9BYS8 371 aa26.26■■□□□ 1.79
HMGA2-203ENST00000393578 ANKIB1Q9P2G1 1089 aa26.26■■□□□ 1.79
HMGA2-203ENST00000393578 NLGN1Q8N2Q7 840 aa26.26■■□□□ 1.79
HMGA2-203ENST00000393578 IRS2Q9Y4H2 1338 aa26.25■■□□□ 1.79
HMGA2-203ENST00000393578 NCOA7Q8NI08 942 aa26.25■■□□□ 1.79
HMGA2-203ENST00000393578 ARMT1Q9H993 441 aa26.25■■□□□ 1.79
HMGA2-203ENST00000393578 RAI14Q9P0K7 980 aa26.25■■□□□ 1.79
HMGA2-203ENST00000393578 XDHP47989 1333 aa26.25■■□□□ 1.79
HMGA2-203ENST00000393578 KLRG2A4D1S0 409 aaPredicted RBP26.24■■□□□ 1.79
HMGA2-203ENST00000393578 STK3Q13188 491 aa26.24■■□□□ 1.79
HMGA2-203ENST00000393578 RGPD3A6NKT7 1758 aaPredicted RBP26.24■■□□□ 1.79
HMGA2-203ENST00000393578 RGPD4Q7Z3J3 1758 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms