RNA–Protein interactions for RNA: ENST00000392995.7

PPM1D-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 2

Gene PPM1D, Length 2,996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-202ENST00000392995 ADAMTS7Q9UKP4 1686 aa17.3■□□□□ 0.36
PPM1D-202ENST00000392995 URI1O94763 535 aaPredicted RBP17.3■□□□□ 0.36
PPM1D-202ENST00000392995 POLR3DP05423 398 aaPredicted RBP17.3■□□□□ 0.36
PPM1D-202ENST00000392995 ATP1A3P13637 1013 aa17.3■□□□□ 0.36
PPM1D-202ENST00000392995 CYP2C19P33261 490 aa17.3■□□□□ 0.36
PPM1D-202ENST00000392995 KAZALD1Q96I82 304 aa17.3■□□□□ 0.36
PPM1D-202ENST00000392995 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.3■□□□□ 0.36
PPM1D-202ENST00000392995 CTDNEP1O95476 244 aa17.29■□□□□ 0.36
PPM1D-202ENST00000392995 CYP21A2P08686 494 aa17.29■□□□□ 0.36
PPM1D-202ENST00000392995 DDX21Q9NR30 783 aaKnown RBP eCLIP17.29■□□□□ 0.36
PPM1D-202ENST00000392995 ANO10Q9NW15 660 aa17.29■□□□□ 0.36
PPM1D-202ENST00000392995 NDUFA8P51970 172 aa17.29■□□□□ 0.36
PPM1D-202ENST00000392995 COPS6Q7L5N1 327 aa17.29■□□□□ 0.36
PPM1D-202ENST00000392995 CEP57L1Q8IYX8 460 aa17.29■□□□□ 0.36
PPM1D-202ENST00000392995 XAGE3Q8WTP9 111 aa17.29■□□□□ 0.36
PPM1D-202ENST00000392995 CACNA1FO60840 1977 aa17.29■□□□□ 0.36
PPM1D-202ENST00000392995 NEMFO60524 1076 aa17.28■□□□□ 0.36
PPM1D-202ENST00000392995 STOX1Q6ZVD7 989 aa17.28■□□□□ 0.36
PPM1D-202ENST00000392995 CARD6Q9BX69 1037 aa17.28■□□□□ 0.36
PPM1D-202ENST00000392995 CALCOCO1Q9P1Z2 691 aa17.28■□□□□ 0.36
PPM1D-202ENST00000392995 PKD1L3Q7Z443 1732 aa17.28■□□□□ 0.36
PPM1D-202ENST00000392995 SNRPA1P09661 255 aaKnown RBP17.28■□□□□ 0.36
PPM1D-202ENST00000392995 ENGASEQ8NFI3 743 aa17.28■□□□□ 0.36
PPM1D-202ENST00000392995 GPHNQ9NQX3 736 aaPredicted RBP17.28■□□□□ 0.36
PPM1D-202ENST00000392995 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
PPM1D-202ENST00000392995 DDX46Q7L014 1031 aaKnown RBP17.28■□□□□ 0.36
PPM1D-202ENST00000392995 ILDR1Q86SU0 546 aaPredicted RBP17.28■□□□□ 0.36
PPM1D-202ENST00000392995 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.28■□□□□ 0.36
PPM1D-202ENST00000392995 PCDHA7Q9UN72 937 aa17.28■□□□□ 0.36
PPM1D-202ENST00000392995 SFPQP23246 707 aaKnown RBP eCLIP17.27■□□□□ 0.36
PPM1D-202ENST00000392995 KSR2Q6VAB6 950 aa17.27■□□□□ 0.36
PPM1D-202ENST00000392995 UBXN4Q92575 508 aa17.27■□□□□ 0.36
PPM1D-202ENST00000392995 SMARCE1Q969G3 411 aa17.27■□□□□ 0.36
PPM1D-202ENST00000392995 RCOR1Q9UKL0 485 aa17.27■□□□□ 0.36
PPM1D-202ENST00000392995 SASH3O75995 380 aa17.27■□□□□ 0.35
PPM1D-202ENST00000392995 C5P01031 1676 aa17.27■□□□□ 0.35
PPM1D-202ENST00000392995 CCDC93Q567U6 631 aa17.27■□□□□ 0.35
PPM1D-202ENST00000392995 FAM160A1Q05DH4 1040 aa17.26■□□□□ 0.35
PPM1D-202ENST00000392995 NSUN7Q8NE18 718 aaKnown RBP17.26■□□□□ 0.35
PPM1D-202ENST00000392995 DPF2Q92785 391 aa17.26■□□□□ 0.35
PPM1D-202ENST00000392995 L2HGDHQ9H9P8 463 aa17.26■□□□□ 0.35
PPM1D-202ENST00000392995 RAD51AP2Q09MP3 1159 aa17.26■□□□□ 0.35
PPM1D-202ENST00000392995 RIC3Q7Z5B4 369 aa17.26■□□□□ 0.35
PPM1D-202ENST00000392995 UTP14AQ9BVJ6 771 aaKnown RBP17.26■□□□□ 0.35
PPM1D-202ENST00000392995 ZSWIM4Q9H7M6 989 aa17.26■□□□□ 0.35
PPM1D-202ENST00000392995 CLIC4Q9Y696 253 aa17.26■□□□□ 0.35
PPM1D-202ENST00000392995 GNL2Q13823 731 aaKnown RBP17.25■□□□□ 0.35
PPM1D-202ENST00000392995 TMCO3Q6UWJ1 677 aa17.25■□□□□ 0.35
PPM1D-202ENST00000392995 EPHA10Q5JZY3 1008 aa17.25■□□□□ 0.35
PPM1D-202ENST00000392995 ZSCAN16Q9H4T2 348 aaPredicted RBP17.25■□□□□ 0.35
PPM1D-202ENST00000392995 LCMT1Q9UIC8 334 aa17.25■□□□□ 0.35
PPM1D-202ENST00000392995 A0A0G2JS52 829 aa17.25■□□□□ 0.35
PPM1D-202ENST00000392995 UBAP1LF5GYI3 381 aa17.25■□□□□ 0.35
PPM1D-202ENST00000392995 A1BGP04217 495 aa17.25■□□□□ 0.35
PPM1D-202ENST00000392995 ZRSR1Q15695 479 aaKnown RBP17.25■□□□□ 0.35
PPM1D-202ENST00000392995 KRBA2Q6ZNG9 492 aa17.25■□□□□ 0.35
PPM1D-202ENST00000392995 MNS1Q8NEH6 495 aa17.25■□□□□ 0.35
PPM1D-202ENST00000392995 ORC3Q9UBD5 711 aaPredicted RBP17.25■□□□□ 0.35
PPM1D-202ENST00000392995 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
PPM1D-202ENST00000392995 TRIM66O15016 1216 aa17.24■□□□□ 0.35
PPM1D-202ENST00000392995 LRP10Q7Z4F1 713 aa17.24■□□□□ 0.35
PPM1D-202ENST00000392995 SF3A1Q15459 793 aaKnown RBP17.24■□□□□ 0.35
PPM1D-202ENST00000392995 MRC1P22897 1456 aa17.23■□□□□ 0.35
PPM1D-202ENST00000392995 TULP2O00295 520 aa17.23■□□□□ 0.35
PPM1D-202ENST00000392995 IGKV5-2P06315 115 aa17.23■□□□□ 0.35
PPM1D-202ENST00000392995 NKX1-1Q15270 411 aaPredicted RBP17.23■□□□□ 0.35
PPM1D-202ENST00000392995 FEZ2Q9UHY8 353 aaPredicted RBP17.23■□□□□ 0.35
PPM1D-202ENST00000392995 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
PPM1D-202ENST00000392995 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
PPM1D-202ENST00000392995 NBPF14Q5TI25 921 aa17.23■□□□□ 0.35
PPM1D-202ENST00000392995 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
PPM1D-202ENST00000392995 FMR1NBQ8N0W7 255 aaPredicted RBP17.23■□□□□ 0.35
PPM1D-202ENST00000392995 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
PPM1D-202ENST00000392995 NBPF15Q8N660 670 aa17.23■□□□□ 0.35
PPM1D-202ENST00000392995 PIGBQ92521 554 aa17.23■□□□□ 0.35
PPM1D-202ENST00000392995 OSBPL5Q9H0X9 879 aaPredicted RBP17.23■□□□□ 0.35
PPM1D-202ENST00000392995 ZNF330Q9Y3S2 320 aaPredicted RBP17.23■□□□□ 0.35
PPM1D-202ENST00000392995 PARP4Q9UKK3 1724 aaKnown RBP17.23■□□□□ 0.35
PPM1D-202ENST00000392995 TMEM232C9JQI7 657 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 CTAGE5O15320 804 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 TOM1O60784 492 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 CAVIN2O95810 425 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 GSDMDP57764 484 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 MYD88Q99836 296 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 MED23Q9ULK4 1368 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 ATP5J2-PTCD1G3V325 749 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 ZRANB2O95218 330 aaKnown RBP eCLIP17.22■□□□□ 0.35
PPM1D-202ENST00000392995 OAS2P29728 719 aaKnown RBP17.22■□□□□ 0.35
PPM1D-202ENST00000392995 ERC1Q8IUD2 1116 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 DBNLQ9UJU6 430 aaKnown RBP17.22■□□□□ 0.35
PPM1D-202ENST00000392995 PXDNLA1KZ92 1463 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 AHDC1Q5TGY3 1603 aaPredicted RBP17.22■□□□□ 0.35
PPM1D-202ENST00000392995 HIP1O00291 1037 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 MARCKSP29966 332 aaPredicted RBP17.22■□□□□ 0.35
PPM1D-202ENST00000392995 EVCP57679 992 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 ETF1P62495 437 aaKnown RBP17.22■□□□□ 0.35
PPM1D-202ENST00000392995 MTX1Q13505 466 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 TEX35Q5T0J7 233 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
PPM1D-202ENST00000392995 KIAA1468Q9P260 1216 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms