RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 PCDHB5Q9Y5E4 795 aa1.97□□□□□ -2.09
RNU1-78P-201ENST00000391248 HRH3Q9Y5N1 445 aa1.97□□□□□ -2.09
RNU1-78P-201ENST00000391248 PTCH2Q9Y6C5 1203 aa1.97□□□□□ -2.09
RNU1-78P-201ENST00000391248 CC2D2AQ9P2K1 1620 aa1.97□□□□□ -2.09
RNU1-78P-201ENST00000391248 PHLDB1Q86UU1 1377 aa1.97□□□□□ -2.09
RNU1-78P-201ENST00000391248 TMEM238LA0A1B0GVL6 79 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 A0A1W2PP55 124 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 A0A1W2PQH9 124 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 GOLGA8CPA6NN73 597 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 B2RBV5 119 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 ALG1L2C9J202 215 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 POTEB2H3BUK9 544 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 NRDCO43847 1150 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 TLL1O43897 1013 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 PLIN1O60240 522 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 TRPA1O75762 1119 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 EYA4O95677 639 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SCGB1D2O95969 90 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 F13A1P00488 732 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 CYP2E1P05181 493 aaPredicted RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 RPLP1P05386 114 aaKnown RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 TFE3P19532 575 aaPredicted RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 VARSP26640 1264 aaKnown RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 GSTT1P30711 240 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 ZNF157P51786 506 aaPredicted RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 NEK3P51956 506 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 EPHB1P54762 984 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 LMNB2Q03252 620 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SSRP1Q08945 709 aaKnown RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 PABPC4Q13310 644 aaKnown RBP eCLIP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 MLC1Q15049 377 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 BRD3Q15059 726 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 PCBP1Q15365 356 aaKnown RBP eCLIP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 TLR1Q15399 786 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 VPS72Q15906 364 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 ESCO1Q5FWF5 840 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 CT47A1Q5JQC4 288 aaPredicted RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SNAP47Q5SQN1 464 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 PPP1R26Q5T8A7 1209 aaPredicted RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 FOXB2Q5VYV0 432 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 POTEAQ6S8J7 498 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 TPTE2Q6XPS3 522 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 PDZRN4Q6ZMN7 1036 aaPredicted RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 GK5Q6ZS86 529 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 DDX46Q7L014 1031 aaKnown RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SV2BQ7L1I2 683 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 NIM1KQ8IY84 436 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 TRMT44Q8IYL2 757 aaKnown RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SAMD3Q8N6K7 520 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 C3orf58Q8NDZ4 430 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SVIPQ8NHG7 77 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 LEO1Q8WVC0 666 aaPredicted RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 NINJ1Q92982 152 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SUSD3Q96L08 255 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 FERD3LQ96RJ6 166 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 ESYT1Q9BSJ8 1104 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 YIPF4Q9BSR8 244 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 MTA3Q9BTC8 594 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 PRR14Q9BWN1 585 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SPATA9Q9BWV2 254 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 ASPSCR1Q9BZE9 553 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 TRIM8Q9BZR9 551 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SRCIN1Q9C0H9 1055 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 CHRDQ9H2X0 955 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SUV39H2Q9H5I1 410 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 ANTXR1Q9H6X2 564 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 ARHGEF10LQ9HCE6 1279 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 BRMS1Q9HCU9 246 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 PTPRHQ9HD43 1115 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 CASS4Q9NQ75 786 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 KCNQ5Q9NR82 932 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 WBP1LQ9NX94 342 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SLC5A4Q9NY91 659 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 FAM13BQ9NYF5 915 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 TAGLN3Q9UI15 199 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 TSR3Q9UJK0 312 aaKnown RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 SALL4Q9UJQ4 1053 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 RTCBQ9Y3I0 505 aaKnown RBP1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 KCNMB2Q9Y691 235 aa1.96□□□□□ -2.1
RNU1-78P-201ENST00000391248 TNKSO95271 1327 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 SOWAHBA6NEL2 793 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 MEN1O00255 615 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 TBX3O15119 743 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 ZNF500O60304 480 aaPredicted RBP1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 PDE8AO60658 829 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 PAGE1O75459 146 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 FOSP01100 380 aaPredicted RBP1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 CELA3AP09093 270 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 ZSCAN20P17040 1043 aaPredicted RBP1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 CD53P19397 219 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 CES1P23141 567 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 SERPINB3P29508 390 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 INPP5BP32019 993 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 STAT3P40763 770 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 PHKA2P46019 1235 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 LIG3P49916 1009 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 IDH3AP50213 366 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 CASP7P55210 303 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 SKOR1P84550 965 aa1.95□□□□□ -2.1
RNU1-78P-201ENST00000391248 STRN3Q13033 797 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms