RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 LGR6Q9HBX8 967 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 DOPEY1Q5JWR5 2465 aa-0.88□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SORL1Q92673 2214 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 EVI5O60447 810 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 FMNL1O95466 1100 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 NUDT3O95989 172 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 F11P03951 625 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 CELA3AP09093 270 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SLC10A3P09131 477 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 PI3P19957 117 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 CCKARP32238 428 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 KCNQ4P56696 695 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 PRSS12P56730 875 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 PCBP4P57723 403 aaKnown RBP-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 RAPGEF1Q13905 1077 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 UVSSAQ2YD98 709 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 FAM182BQ5T319 152 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ZNF468Q5VIY5 522 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SLC23A3Q6PIS1 610 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 FAM20CQ8IXL6 584 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 BMPERQ8N8U9 685 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 GIMAP7Q8NHV1 300 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 CDCA7LQ96GN5 454 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 FAM46AQ96IP4 442 aaKnown RBP-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 KIRREL1Q96J84 757 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ZNF778Q96MU6 729 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 NECAB3Q96P71 396 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 WDR24Q96S15 920 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 EYA1Q99502 592 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 EHMT1Q9H9B1 1298 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 MLXIPLQ9NP71 852 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SLC2A4RGQ9NR83 387 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 CCDC9Q9Y3X0 531 aaKnown RBP-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SMAD5-AS1Q9Y6J3 95 aa-0.89□□□□□ -2.55
RNU6-1340P-201ENST00000384438 STAB1Q9NY15 2570 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 MYOCOSA0A1B0GUC4 107 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 PLSCR1O15162 318 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SEMA7AO75326 666 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 DXOO77932 396 aaKnown RBP-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 PHF14O94880 888 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 NTN1O95631 604 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ARP10275 920 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SLC4A3P48751 1232 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 SPDYAQ5MJ70 313 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ZNF425Q6IV72 752 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 NUDT18Q6ZVK8 323 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 ZNF627Q7L945 461 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 KRTAP13-1Q8IUC0 172 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 FBXO41Q8TF61 875 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 LARP4BQ92615 738 aaKnown RBP-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 NELL1Q92832 810 aa-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 UPF1Q92900 1129 aaKnown RBP eCLIP-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 METTL22Q9BUU2 404 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-1340P-201ENST00000384438 TNXBP22105 4242 aa-0.91□□□□□ -2.55
RNU6-1340P-201ENST00000384438 AGRNO00468 2067 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 BRINP1O60477 761 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 RAMP2O60895 175 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 LILRB5O75023 590 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 GLB1P16278 677 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 KCNC1P48547 511 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZNF81P51508 661 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 MLLT6P55198 1093 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 LBRQ14739 615 aaKnown RBP-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZIK1Q3SY52 487 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 MORN1Q5T089 497 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ANKRD34AQ69YU3 496 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 LRFN4Q6PJG9 635 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 SUSD1Q6UWL2 747 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 BEND4Q6ZU67 534 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZNF605Q86T29 641 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ADGRG3Q86Y34 549 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 DMRTC2Q8IXT2 367 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 FIBCD1Q8N539 461 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 TAB3Q8N5C8 712 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 UTP4Q969X6 686 aaKnown RBP-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 MISP3Q96FF7 219 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 AGBL1Q96MI9 1066 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZNF275Q9NSD4 429 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 FRMD4BQ9Y2L6 1034 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZKSCAN5Q9Y2L8 839 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 CORINQ9Y5Q5 1042 aa-0.91□□□□□ -2.56
RNU6-1340P-201ENST00000384438 RYR3Q15413 4870 aa-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 FOXN1O15353 648 aa-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 PEX10O60683 326 aa-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 DEAF1O75398 565 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 RGS9O75916 674 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 LMNAP02545 664 aaKnown RBP-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 PROZP22891 400 aa-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 HOXD9P28356 352 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 RNF144AP50876 292 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 SLURP1P55000 103 aa-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 DSG2Q14126 1118 aa-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 MEPCEQ7L2J0 689 aaKnown RBP-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 CCDC24Q8N4L8 307 aa-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 TRAF4Q9BUZ4 470 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 MRPL18Q9H0U6 180 aaKnown RBP-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 COX11Q9Y6N1 276 aa-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 CACNA1IQ9P0X4 2223 aa-0.92□□□□□ -2.56
RNU6-1340P-201ENST00000384438 FN1P02751 2386 aaKnown RBP-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 TEX51A0A1B0GUA7 166 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms