RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 STK3Q13188 491 aa17.87■□□□□ 0.45
SNX2-201ENST00000379516 IMMTQ16891 758 aaKnown RBP17.87■□□□□ 0.45
SNX2-201ENST00000379516 KRT27Q7Z3Y8 459 aa17.87■□□□□ 0.45
SNX2-201ENST00000379516 LRRC2Q9BYS8 371 aa17.87■□□□□ 0.45
SNX2-201ENST00000379516 STX6O43752 255 aa17.87■□□□□ 0.45
SNX2-201ENST00000379516 PRPF40AO75400 957 aaKnown RBP17.87■□□□□ 0.45
SNX2-201ENST00000379516 MINPP1Q9UNW1 487 aa17.87■□□□□ 0.45
SNX2-201ENST00000379516 MAP3K12Q12852 859 aa17.86■□□□□ 0.45
SNX2-201ENST00000379516 TAF1LQ8IZX4 1826 aa17.86■□□□□ 0.45
SNX2-201ENST00000379516 ZSCAN22P10073 491 aaPredicted RBP17.86■□□□□ 0.45
SNX2-201ENST00000379516 HAND2P61296 217 aa17.86■□□□□ 0.45
SNX2-201ENST00000379516 RPS8P62241 208 aaKnown RBP17.86■□□□□ 0.45
SNX2-201ENST00000379516 UBE4AQ14139 1066 aa17.86■□□□□ 0.45
SNX2-201ENST00000379516 FOXD4L6Q3SYB3 417 aaPredicted RBP17.86■□□□□ 0.45
SNX2-201ENST00000379516 FOXD4L3Q6VB84 417 aaPredicted RBP17.86■□□□□ 0.45
SNX2-201ENST00000379516 BRF1Q92994 677 aa17.86■□□□□ 0.45
SNX2-201ENST00000379516 TCRBV5S4A2TA0A5A2 114 aa17.85■□□□□ 0.45
SNX2-201ENST00000379516 TRIM37O94972 964 aa17.85■□□□□ 0.45
SNX2-201ENST00000379516 KLHL40Q2TBA0 621 aa17.85■□□□□ 0.45
SNX2-201ENST00000379516 MAGEB6Q8N7X4 407 aa17.85■□□□□ 0.45
SNX2-201ENST00000379516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.84■□□□□ 0.45
SNX2-201ENST00000379516 WTIPA6NIX2 430 aaPredicted RBP17.84■□□□□ 0.45
SNX2-201ENST00000379516 EXOSC10Q01780 885 aaKnown RBP17.84■□□□□ 0.45
SNX2-201ENST00000379516 AIDAQ96BJ3 306 aa17.84■□□□□ 0.45
SNX2-201ENST00000379516 ADRA2BP18089 450 aa17.84■□□□□ 0.45
SNX2-201ENST00000379516 GYG1P46976 350 aa17.84■□□□□ 0.45
SNX2-201ENST00000379516 NFIXQ14938 502 aa17.84■□□□□ 0.45
SNX2-201ENST00000379516 IQSEC3Q9UPP2 1182 aaPredicted RBP17.84■□□□□ 0.45
SNX2-201ENST00000379516 COL24A1Q17RW2 1714 aa17.84■□□□□ 0.45
SNX2-201ENST00000379516 ZNF213O14771 459 aa17.83■□□□□ 0.45
SNX2-201ENST00000379516 APPP05067 770 aa17.83■□□□□ 0.45
SNX2-201ENST00000379516 NCLP19338 710 aaKnown RBP17.83■□□□□ 0.45
SNX2-201ENST00000379516 GNL3LQ9NVN8 582 aaKnown RBP17.83■□□□□ 0.45
SNX2-201ENST00000379516 MYH7P12883 1935 aa17.83■□□□□ 0.44
SNX2-201ENST00000379516 CAVIN4Q5BKX8 364 aa17.83■□□□□ 0.44
SNX2-201ENST00000379516 SLC27A3Q5K4L6 730 aa17.83■□□□□ 0.44
SNX2-201ENST00000379516 CHST3Q7LGC8 479 aa17.83■□□□□ 0.44
SNX2-201ENST00000379516 CARMIL3Q8ND23 1372 aa17.83■□□□□ 0.44
SNX2-201ENST00000379516 VPS37DQ86XT2 251 aa17.82■□□□□ 0.44
SNX2-201ENST00000379516 GTF3C6Q969F1 213 aa17.82■□□□□ 0.44
SNX2-201ENST00000379516 STRBPQ96SI9 672 aaKnown RBP17.82■□□□□ 0.44
SNX2-201ENST00000379516 LRP2BPQ9P2M1 347 aa17.82■□□□□ 0.44
SNX2-201ENST00000379516 F13A1P00488 732 aa17.81■□□□□ 0.44
SNX2-201ENST00000379516 LARP1BQ659C4 914 aaKnown RBP17.81■□□□□ 0.44
SNX2-201ENST00000379516 MTMR6Q9Y217 621 aa17.81■□□□□ 0.44
SNX2-201ENST00000379516 TAF1P21675 1872 aa17.81■□□□□ 0.44
SNX2-201ENST00000379516 ZNF804BA4D1E1 1349 aa17.81■□□□□ 0.44
SNX2-201ENST00000379516 C4AP0C0L4 1744 aa17.81■□□□□ 0.44
SNX2-201ENST00000379516 VPS37CA5D8V6 355 aaPredicted RBP17.81■□□□□ 0.44
SNX2-201ENST00000379516 GOLGA6L3A6NEY3 463 aa17.81■□□□□ 0.44
SNX2-201ENST00000379516 TM4SF1P30408 202 aa17.81■□□□□ 0.44
SNX2-201ENST00000379516 APOBRQ0VD83 1088 aa17.81■□□□□ 0.44
SNX2-201ENST00000379516 CNBD1Q8NA66 436 aa17.81■□□□□ 0.44
SNX2-201ENST00000379516 AGXT2Q9BYV1 514 aa17.81■□□□□ 0.44
SNX2-201ENST00000379516 ANKRD2Q9GZV1 360 aa17.8■□□□□ 0.44
SNX2-201ENST00000379516 MYO5AQ9Y4I1 1855 aaKnown RBP17.8■□□□□ 0.44
SNX2-201ENST00000379516 MBD4O95243 580 aa17.8■□□□□ 0.44
SNX2-201ENST00000379516 PDCP20941 246 aa17.8■□□□□ 0.44
SNX2-201ENST00000379516 SCRN1Q12765 414 aa17.8■□□□□ 0.44
SNX2-201ENST00000379516 FAM84BQ96KN1 310 aaPredicted RBP17.8■□□□□ 0.44
SNX2-201ENST00000379516 ABCF2Q9UG63 623 aa17.8■□□□□ 0.44
SNX2-201ENST00000379516 ATP6V1DQ9Y5K8 247 aa17.8■□□□□ 0.44
SNX2-201ENST00000379516 CASZ1Q86V15 1759 aa17.8■□□□□ 0.44
SNX2-201ENST00000379516 EP400Q96L91 3159 aa17.79■□□□□ 0.44
SNX2-201ENST00000379516 PFKFB2O60825 505 aa17.79■□□□□ 0.44
SNX2-201ENST00000379516 PDIA4P13667 645 aaKnown RBP17.79■□□□□ 0.44
SNX2-201ENST00000379516 RALYLQ86SE5 291 aaKnown RBP17.79■□□□□ 0.44
SNX2-201ENST00000379516 NCOA7Q8NI08 942 aa17.79■□□□□ 0.44
SNX2-201ENST00000379516 GPT2Q8TD30 523 aa17.79■□□□□ 0.44
SNX2-201ENST00000379516 ARMT1Q9H993 441 aa17.79■□□□□ 0.44
SNX2-201ENST00000379516 NAP1L2Q9ULW6 460 aaPredicted RBP17.79■□□□□ 0.44
SNX2-201ENST00000379516 PATL2C9JE40 543 aaKnown RBP17.78■□□□□ 0.44
SNX2-201ENST00000379516 GYS1P13807 737 aa17.78■□□□□ 0.44
SNX2-201ENST00000379516 L1TD1Q5T7N2 865 aaKnown RBP17.78■□□□□ 0.44
SNX2-201ENST00000379516 GDPD2Q9HCC8 539 aa17.78■□□□□ 0.44
SNX2-201ENST00000379516 LAMA4Q16363 1823 aa17.78■□□□□ 0.44
SNX2-201ENST00000379516 FSD2A1L4K1 749 aa17.78■□□□□ 0.44
SNX2-201ENST00000379516 JAK2O60674 1132 aa17.78■□□□□ 0.44
SNX2-201ENST00000379516 MCM5P33992 734 aa17.78■□□□□ 0.44
SNX2-201ENST00000379516 CAVIN1Q6NZI2 390 aaKnown RBP17.78■□□□□ 0.44
SNX2-201ENST00000379516 MB21D2Q8IYB1 491 aaPredicted RBP17.78■□□□□ 0.44
SNX2-201ENST00000379516 DENND2AQ9ULE3 1009 aa17.78■□□□□ 0.44
SNX2-201ENST00000379516 PRC1O43663 620 aa17.77■□□□□ 0.44
SNX2-201ENST00000379516 KLRK1P26718 216 aa17.77■□□□□ 0.44
SNX2-201ENST00000379516 RAI14Q9P0K7 980 aa17.77■□□□□ 0.44
SNX2-201ENST00000379516 RBM6P78332 1123 aaKnown RBP17.77■□□□□ 0.43
SNX2-201ENST00000379516 CCT2P78371 535 aaKnown RBP17.77■□□□□ 0.43
SNX2-201ENST00000379516 TRDNQ13061 729 aa17.77■□□□□ 0.43
SNX2-201ENST00000379516 ALX1Q15699 326 aa17.77■□□□□ 0.43
SNX2-201ENST00000379516 PRR5LQ6MZQ0 368 aa17.77■□□□□ 0.43
SNX2-201ENST00000379516 FBXO33Q7Z6M2 555 aa17.77■□□□□ 0.43
SNX2-201ENST00000379516 USP48Q86UV5 1035 aa17.77■□□□□ 0.43
SNX2-201ENST00000379516 IFNL3Q8IZI9 196 aa17.77■□□□□ 0.43
SNX2-201ENST00000379516 FBXL16Q8N461 479 aa17.77■□□□□ 0.43
SNX2-201ENST00000379516 NBPF3Q9H094 633 aa17.77■□□□□ 0.43
SNX2-201ENST00000379516 BRWD3Q6RI45 1802 aa17.76■□□□□ 0.43
SNX2-201ENST00000379516 DOCK2Q92608 1830 aa17.76■□□□□ 0.43
SNX2-201ENST00000379516 CYP7A1P22680 504 aa17.76■□□□□ 0.43
SNX2-201ENST00000379516 TXNRD1Q16881 649 aa17.76■□□□□ 0.43
SNX2-201ENST00000379516 ZNF772Q68DY9 489 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms