RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 RCOR1Q9UKL0 485 aa28.23■■■□□ 2.11
SNX5-201ENST00000377759 ADD2P35612 726 aa28.22■■■□□ 2.11
SNX5-201ENST00000377759 ANTXR2P58335 489 aa28.22■■■□□ 2.11
SNX5-201ENST00000377759 FAM200AQ8TCP9 573 aa28.22■■■□□ 2.11
SNX5-201ENST00000377759 BICD2Q8TD16 824 aa28.22■■■□□ 2.11
SNX5-201ENST00000377759 KIF3AQ9Y496 699 aa28.22■■■□□ 2.11
SNX5-201ENST00000377759 PLCH1Q4KWH8 1693 aa28.22■■■□□ 2.11
SNX5-201ENST00000377759 ILDR1Q86SU0 546 aaPredicted RBP28.22■■■□□ 2.11
SNX5-201ENST00000377759 ZNF830Q96NB3 372 aaPredicted RBP28.22■■■□□ 2.11
SNX5-201ENST00000377759 PIH1D3Q9NQM4 214 aaKnown RBP28.22■■■□□ 2.11
SNX5-201ENST00000377759 SLIT2O94813 1529 aa28.22■■■□□ 2.11
SNX5-201ENST00000377759 CEBPZQ03701 1054 aaKnown RBP28.21■■■□□ 2.11
SNX5-201ENST00000377759 COL16A1Q07092 1604 aaPredicted RBP28.21■■■□□ 2.11
SNX5-201ENST00000377759 CARMIL3Q8ND23 1372 aa28.21■■■□□ 2.11
SNX5-201ENST00000377759 MYH15Q9Y2K3 1946 aa28.21■■■□□ 2.11
SNX5-201ENST00000377759 PRC1O43663 620 aa28.21■■■□□ 2.11
SNX5-201ENST00000377759 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.2■■■□□ 2.113e-10■■□□□ 12.1
SNX5-201ENST00000377759 HPS5Q9UPZ3 1129 aa28.2■■■□□ 2.11
SNX5-201ENST00000377759 USP28Q96RU2 1077 aa28.2■■■□□ 2.1
SNX5-201ENST00000377759 NBPF3Q9H094 633 aa28.2■■■□□ 2.1
SNX5-201ENST00000377759 PHKA1P46020 1223 aa28.19■■■□□ 2.1
SNX5-201ENST00000377759 GUCY1B3Q02153 619 aa28.19■■■□□ 2.1
SNX5-201ENST00000377759 SLC9C2Q5TAH2 1124 aa28.19■■■□□ 2.1
SNX5-201ENST00000377759 CCDC102BQ68D86 513 aa28.19■■■□□ 2.1
SNX5-201ENST00000377759 NCOA7Q8NI08 942 aa28.18■■■□□ 2.1
SNX5-201ENST00000377759 ZNF213O14771 459 aa28.18■■■□□ 2.1
SNX5-201ENST00000377759 PLCB2Q00722 1185 aa28.18■■■□□ 2.1
SNX5-201ENST00000377759 CHMP4CQ96CF2 233 aa28.18■■■□□ 2.1
SNX5-201ENST00000377759 TTC12Q9H892 705 aaPredicted RBP28.18■■■□□ 2.1
SNX5-201ENST00000377759 ATRNO75882 1429 aa28.18■■■□□ 2.1
SNX5-201ENST00000377759 TPM2P07951 284 aa28.17■■■□□ 2.1
SNX5-201ENST00000377759 FGFR2P21802 821 aa28.17■■■□□ 2.1
SNX5-201ENST00000377759 ARID4AP29374 1257 aaPredicted RBP28.17■■■□□ 2.1
SNX5-201ENST00000377759 ANO6Q4KMQ2 910 aa28.17■■■□□ 2.1
SNX5-201ENST00000377759 EIF5P55010 431 aaKnown RBP28.17■■■□□ 2.1
SNX5-201ENST00000377759 KIAA2012Q0VF49 1180 aa28.17■■■□□ 2.1
SNX5-201ENST00000377759 ZSCAN25Q6NSZ9 544 aa28.17■■■□□ 2.1
SNX5-201ENST00000377759 LUZP1Q86V48 1076 aa28.17■■■□□ 2.1
SNX5-201ENST00000377759 NKX2-3Q8TAU0 364 aa28.17■■■□□ 2.1
SNX5-201ENST00000377759 LRP5O75197 1615 aa28.16■■■□□ 2.1
SNX5-201ENST00000377759 DDX60Q8IY21 1712 aaKnown RBP28.16■■■□□ 2.1
SNX5-201ENST00000377759 MYO5AQ9Y4I1 1855 aaKnown RBP28.16■■■□□ 2.1
SNX5-201ENST00000377759 KLF18A0A0U1RQI7 1052 aa28.16■■■□□ 2.1
SNX5-201ENST00000377759 TERF1P54274 439 aa28.16■■■□□ 2.1
SNX5-201ENST00000377759 TTF1Q15361 905 aaPredicted RBP28.16■■■□□ 2.1
SNX5-201ENST00000377759 UBE3CQ15386 1083 aa28.16■■■□□ 2.1
SNX5-201ENST00000377759 ATL3Q6DD88 541 aa28.16■■■□□ 2.1
SNX5-201ENST00000377759 CBX8Q9HC52 389 aa28.16■■■□□ 2.1
SNX5-201ENST00000377759 INTS5Q6P9B9 1019 aaKnown RBP28.16■■■□□ 2.1
SNX5-201ENST00000377759 DENND2AQ9ULE3 1009 aa28.16■■■□□ 2.1
SNX5-201ENST00000377759 R3HCC1Q9Y3T6 440 aaKnown RBP28.16■■■□□ 2.1
SNX5-201ENST00000377759 HELBQ8NG08 1087 aaPredicted RBP28.15■■■□□ 2.1
SNX5-201ENST00000377759 WDR19Q8NEZ3 1342 aa28.15■■■□□ 2.1
SNX5-201ENST00000377759 SUSD4Q5VX71 490 aa28.15■■■□□ 2.1
SNX5-201ENST00000377759 GOLPH3LQ9H4A5 285 aa28.15■■■□□ 2.1
SNX5-201ENST00000377759 TCRBV5S4A2TA0A5A2 114 aa28.14■■■□□ 2.1
SNX5-201ENST00000377759 IDH1O75874 414 aaKnown RBP28.14■■■□□ 2.1
SNX5-201ENST00000377759 PUM3Q15397 648 aaKnown RBP28.14■■■□□ 2.1
SNX5-201ENST00000377759 ZNF396Q96N95 335 aaPredicted RBP28.14■■■□□ 2.1
SNX5-201ENST00000377759 WWC3Q9ULE0 1092 aa28.14■■■□□ 2.1
SNX5-201ENST00000377759 WNK3Q9BYP7 1800 aa28.14■■■□□ 2.09
SNX5-201ENST00000377759 DOT1LQ8TEK3 1739 aa28.14■■■□□ 2.09
SNX5-201ENST00000377759 ZNF532Q9HCE3 1301 aa28.13■■■□□ 2.09
SNX5-201ENST00000377759 PDE6AP16499 860 aa28.13■■■□□ 2.09
SNX5-201ENST00000377759 RALYLQ86SE5 291 aaKnown RBP28.13■■■□□ 2.09
SNX5-201ENST00000377759 TBC1D10CQ8IV04 446 aa28.13■■■□□ 2.09
SNX5-201ENST00000377759 LPIN2Q92539 896 aa28.13■■■□□ 2.09
SNX5-201ENST00000377759 COL22A1Q8NFW1 1626 aaPredicted RBP28.13■■■□□ 2.09
SNX5-201ENST00000377759 GOLGA8BA8MQT2 603 aa28.13■■■□□ 2.09
SNX5-201ENST00000377759 OTUD7BQ6GQQ9 843 aa28.13■■■□□ 2.09
SNX5-201ENST00000377759 CCAR1Q8IX12 1150 aaKnown RBP28.13■■■□□ 2.09
SNX5-201ENST00000377759 MROH5Q6ZUA9 1318 aa28.12■■■□□ 2.09
SNX5-201ENST00000377759 UQCRFS1P1P0C7P4 283 aa28.12■■■□□ 2.09
SNX5-201ENST00000377759 SNW1Q13573 536 aaKnown RBP28.12■■■□□ 2.09
SNX5-201ENST00000377759 RAB11FIP4Q86YS3 637 aa28.12■■■□□ 2.09
SNX5-201ENST00000377759 AK7Q96M32 723 aa28.12■■■□□ 2.09
SNX5-201ENST00000377759 PIBF1Q8WXW3 757 aa28.12■■■□□ 2.09
SNX5-201ENST00000377759 ROBO1Q9Y6N7 1651 aa28.11■■■□□ 2.09
SNX5-201ENST00000377759 SASS6Q6UVJ0 657 aa28.11■■■□□ 2.09
SNX5-201ENST00000377759 ENGASEQ8NFI3 743 aa28.11■■■□□ 2.09
SNX5-201ENST00000377759 SNAP23O00161 211 aa28.1■■■□□ 2.09
SNX5-201ENST00000377759 DHX16O60231 1041 aaKnown RBP28.1■■■□□ 2.09
SNX5-201ENST00000377759 CCDC87Q9NVE4 849 aa28.1■■■□□ 2.09
SNX5-201ENST00000377759 CYB5R4Q7L1T6 521 aa28.09■■■□□ 2.09
SNX5-201ENST00000377759 ORC3Q9UBD5 711 aaPredicted RBP28.09■■■□□ 2.09
SNX5-201ENST00000377759 FBXO18Q8NFZ0 1043 aa28.09■■■□□ 2.09
SNX5-201ENST00000377759 TDRD7Q8NHU6 1098 aaKnown RBP28.09■■■□□ 2.09
SNX5-201ENST00000377759 STRBPQ96SI9 672 aaKnown RBP28.09■■■□□ 2.09
SNX5-201ENST00000377759 DNAJC25Q9H1X3 360 aa28.09■■■□□ 2.09
SNX5-201ENST00000377759 KCNF1Q9H3M0 494 aa28.09■■■□□ 2.09
SNX5-201ENST00000377759 SEC31BQ9NQW1 1179 aa28.09■■■□□ 2.09
SNX5-201ENST00000377759 AHDC1Q5TGY3 1603 aaPredicted RBP28.09■■■□□ 2.09
SNX5-201ENST00000377759 CRKLP46109 303 aaKnown RBP28.08■■■□□ 2.09
SNX5-201ENST00000377759 C8orf76Q96K31 380 aa28.08■■■□□ 2.09
SNX5-201ENST00000377759 RTEL1Q9NZ71 1219 aa28.08■■■□□ 2.09
SNX5-201ENST00000377759 GJB4Q9NTQ9 266 aa28.08■■■□□ 2.09
SNX5-201ENST00000377759 ARAP2Q8WZ64 1704 aa28.08■■■□□ 2.09
SNX5-201ENST00000377759 ZNF165P49910 485 aa28.07■■■□□ 2.08
SNX5-201ENST00000377759 SPATA5Q8NB90 893 aa28.07■■■□□ 2.08
SNX5-201ENST00000377759 SPATA31A1Q5TZJ5 1347 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms