RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 ORC3Q9UBD5 711 aaPredicted RBP19■□□□□ 0.63
TRIM27-202ENST00000377199 AKAP2Q9Y2D5 859 aa19■□□□□ 0.63
TRIM27-202ENST00000377199 CLIC4Q9Y696 253 aa19■□□□□ 0.63
TRIM27-202ENST00000377199 STK38Q15208 465 aa19■□□□□ 0.63
TRIM27-202ENST00000377199 SLC9C2Q5TAH2 1124 aa19■□□□□ 0.63
TRIM27-202ENST00000377199 PIGBQ92521 554 aa19■□□□□ 0.63
TRIM27-202ENST00000377199 SPTLC3Q9NUV7 552 aa19■□□□□ 0.63
TRIM27-202ENST00000377199 CIAO1O76071 339 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 ZNF592Q92610 1267 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 AIFM3Q96NN9 605 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 ISCA1Q9BUE6 129 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 RCOR1Q9UKL0 485 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 PCDHA7Q9UN72 937 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 MCAMP43121 646 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 NKX2-3Q8TAU0 364 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 INCENPQ9NQS7 918 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 TBC1D2BQ9UPU7 963 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 LMTK3Q96Q04 1460 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 SNW1Q13573 536 aaKnown RBP18.99■□□□□ 0.63
TRIM27-202ENST00000377199 RBM43Q6ZSC3 357 aaKnown RBP18.99■□□□□ 0.63
TRIM27-202ENST00000377199 TDRD7Q8NHU6 1098 aaKnown RBP18.99■□□□□ 0.63
TRIM27-202ENST00000377199 ZNF274Q96GC6 653 aaPredicted RBP18.99■□□□□ 0.63
TRIM27-202ENST00000377199 CTNNA3Q9UI47 895 aa18.99■□□□□ 0.63
TRIM27-202ENST00000377199 CPDO75976 1380 aa18.98■□□□□ 0.63
TRIM27-202ENST00000377199 RIOK3O14730 519 aaKnown RBP18.98■□□□□ 0.63
TRIM27-202ENST00000377199 ZSCAN25Q6NSZ9 544 aa18.98■□□□□ 0.63
TRIM27-202ENST00000377199 AOPEPQ8N6M6 819 aa18.98■□□□□ 0.63
TRIM27-202ENST00000377199 CACTINQ8WUQ7 758 aaKnown RBP18.98■□□□□ 0.63
TRIM27-202ENST00000377199 PRIMPOLQ96LW4 560 aa18.98■□□□□ 0.63
TRIM27-202ENST00000377199 TRMT112Q9UI30 125 aaKnown RBP18.98■□□□□ 0.63
TRIM27-202ENST00000377199 PLA2G4DQ86XP0 818 aa18.97■□□□□ 0.63
TRIM27-202ENST00000377199 APPBP2Q92624 585 aa18.97■□□□□ 0.63
TRIM27-202ENST00000377199 AGXT2Q9BYV1 514 aa18.97■□□□□ 0.63
TRIM27-202ENST00000377199 TPM3P06753 285 aa18.97■□□□□ 0.63
TRIM27-202ENST00000377199 MARCKSP29966 332 aaPredicted RBP18.97■□□□□ 0.63
TRIM27-202ENST00000377199 NDUFA8P51970 172 aa18.97■□□□□ 0.63
TRIM27-202ENST00000377199 FAM160A1Q05DH4 1040 aa18.97■□□□□ 0.63
TRIM27-202ENST00000377199 ZRSR1Q15695 479 aaKnown RBP18.97■□□□□ 0.63
TRIM27-202ENST00000377199 STX1AQ16623 288 aa18.97■□□□□ 0.63
TRIM27-202ENST00000377199 NCOA7Q8NI08 942 aa18.97■□□□□ 0.63
TRIM27-202ENST00000377199 MYL10Q9BUA6 226 aa18.97■□□□□ 0.63
TRIM27-202ENST00000377199 ANTXR2P58335 489 aa18.96■□□□□ 0.63
TRIM27-202ENST00000377199 LRRFIP1Q32MZ4 808 aaKnown RBP18.96■□□□□ 0.63
TRIM27-202ENST00000377199 MICU3Q86XE3 530 aa18.96■□□□□ 0.63
TRIM27-202ENST00000377199 CARD10Q9BWT7 1032 aa18.96■□□□□ 0.63
TRIM27-202ENST00000377199 SLAIN2Q9P270 581 aa18.96■□□□□ 0.63
TRIM27-202ENST00000377199 SALL1Q9NSC2 1324 aa18.96■□□□□ 0.63
TRIM27-202ENST00000377199 ZBTB38Q8NAP3 1195 aaPredicted RBP18.96■□□□□ 0.63
TRIM27-202ENST00000377199 PHKBQ93100 1093 aa18.96■□□□□ 0.63
TRIM27-202ENST00000377199 GLI3P10071 1580 aa18.96■□□□□ 0.63
TRIM27-202ENST00000377199 STARD3NLO95772 234 aa18.96■□□□□ 0.63
TRIM27-202ENST00000377199 TRDNQ13061 729 aa18.96■□□□□ 0.63
TRIM27-202ENST00000377199 MRPS27Q92552 414 aaKnown RBP18.96■□□□□ 0.63
TRIM27-202ENST00000377199 PCCAP05165 728 aaPredicted RBP18.95■□□□□ 0.62
TRIM27-202ENST00000377199 IQCB1Q15051 598 aa18.95■□□□□ 0.62
TRIM27-202ENST00000377199 SENP2Q9HC62 589 aa18.95■□□□□ 0.62
TRIM27-202ENST00000377199 STRCP1A6NGW2 1772 aa18.95■□□□□ 0.62
TRIM27-202ENST00000377199 LAMA4Q16363 1823 aa18.95■□□□□ 0.62
TRIM27-202ENST00000377199 COL5A2P05997 1499 aaPredicted RBP18.95■□□□□ 0.62
TRIM27-202ENST00000377199 KCPQ6ZWJ8 1503 aa18.95■□□□□ 0.62
TRIM27-202ENST00000377199 KIF28PB7ZC32 967 aa18.95■□□□□ 0.62
TRIM27-202ENST00000377199 GNL2Q13823 731 aaKnown RBP18.95■□□□□ 0.62
TRIM27-202ENST00000377199 TPD52L1Q16890 204 aaPredicted RBP18.95■□□□□ 0.62
TRIM27-202ENST00000377199 SYNE3Q6ZMZ3 975 aa18.95■□□□□ 0.62
TRIM27-202ENST00000377199 ZNF710Q8N1W2 664 aa18.95■□□□□ 0.62
TRIM27-202ENST00000377199 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
TRIM27-202ENST00000377199 B4E1Z4 1266 aa18.94■□□□□ 0.62
TRIM27-202ENST00000377199 IRS4O14654 1257 aaPredicted RBP18.94■□□□□ 0.62
TRIM27-202ENST00000377199 PHKA1P46020 1223 aa18.94■□□□□ 0.62
TRIM27-202ENST00000377199 TTLL11Q8NHH1 800 aa18.94■□□□□ 0.62
TRIM27-202ENST00000377199 TOMM22Q9NS69 142 aa18.94■□□□□ 0.62
TRIM27-202ENST00000377199 HPS5Q9UPZ3 1129 aa18.94■□□□□ 0.62
TRIM27-202ENST00000377199 ZBTB1Q9Y2K1 713 aa18.94■□□□□ 0.62
TRIM27-202ENST00000377199 MB21D2Q8IYB1 491 aaPredicted RBP18.94■□□□□ 0.62
TRIM27-202ENST00000377199 BCL2L12Q9HB09 334 aa18.94■□□□□ 0.62
TRIM27-202ENST00000377199 PIH1D3Q9NQM4 214 aaKnown RBP18.94■□□□□ 0.62
TRIM27-202ENST00000377199 BTG4Q9NY30 223 aa18.94■□□□□ 0.62
TRIM27-202ENST00000377199 ANKRD18BA2A2Z9 1011 aa18.93■□□□□ 0.62
TRIM27-202ENST00000377199 UBE2Q2LH0YL09 131 aa18.93■□□□□ 0.62
TRIM27-202ENST00000377199 ZFYP08048 801 aaPredicted RBP18.93■□□□□ 0.62
TRIM27-202ENST00000377199 NFXL1Q6ZNB6 911 aa18.93■□□□□ 0.62
TRIM27-202ENST00000377199 TBC1D10CQ8IV04 446 aa18.93■□□□□ 0.62
TRIM27-202ENST00000377199 CCDC82Q8N4S0 544 aa18.93■□□□□ 0.62
TRIM27-202ENST00000377199 TRMT1Q9NXH9 659 aaKnown RBP18.93■□□□□ 0.62
TRIM27-202ENST00000377199 PKD1L3Q7Z443 1732 aa18.93■□□□□ 0.62
TRIM27-202ENST00000377199 NKX1-1Q15270 411 aaPredicted RBP18.93■□□□□ 0.62
TRIM27-202ENST00000377199 NLRP10Q86W26 655 aa18.93■□□□□ 0.62
TRIM27-202ENST00000377199 ENGASEQ8NFI3 743 aa18.93■□□□□ 0.62
TRIM27-202ENST00000377199 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.93■□□□□ 0.626e-7■■■□□ 16
TRIM27-202ENST00000377199 PRDM10Q9NQV6 1147 aa18.93■□□□□ 0.62
TRIM27-202ENST00000377199 WWC3Q9ULE0 1092 aa18.93■□□□□ 0.62
TRIM27-202ENST00000377199 ZNF532Q9HCE3 1301 aa18.93■□□□□ 0.62
TRIM27-202ENST00000377199 DHX16O60231 1041 aaKnown RBP18.92■□□□□ 0.62
TRIM27-202ENST00000377199 TNNT1P13805 278 aa18.92■□□□□ 0.62
TRIM27-202ENST00000377199 RRP12Q5JTH9 1297 aaKnown RBP18.92■□□□□ 0.62
TRIM27-202ENST00000377199 GIGYF2Q6Y7W6 1299 aaKnown RBP18.92■□□□□ 0.62
TRIM27-202ENST00000377199 CEP57L1Q8IYX8 460 aa18.92■□□□□ 0.62
TRIM27-202ENST00000377199 LINC00301Q8NCQ3 95 aa18.92■□□□□ 0.62
TRIM27-202ENST00000377199 FBXO18Q8NFZ0 1043 aa18.92■□□□□ 0.62
TRIM27-202ENST00000377199 ANO10Q9NW15 660 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms