RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 ADALQ6DHV7 355 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 XAGE2Q96GT9 111 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 CARD10Q9BWT7 1032 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 RIC1Q4ADV7 1423 aa12.5□□□□□ -0.41
ABCF1-202ENST00000376545 ARAP2Q8WZ64 1704 aa12.49□□□□□ -0.41
ABCF1-202ENST00000376545 ECM29Q5VYK3 1845 aa12.49□□□□□ -0.41
ABCF1-202ENST00000376545 ZNF512BQ96KM6 892 aaPredicted RBP12.49□□□□□ -0.41
ABCF1-202ENST00000376545 NEDD4P46934 1319 aa12.49□□□□□ -0.41
ABCF1-202ENST00000376545 RBM6P78332 1123 aaKnown RBP12.49□□□□□ -0.41
ABCF1-202ENST00000376545 LRMPQ12912 555 aa12.49□□□□□ -0.41
ABCF1-202ENST00000376545 CCDC144BQ3MJ40 725 aa12.49□□□□□ -0.41
ABCF1-202ENST00000376545 CCDC158Q5M9N0 1113 aa12.49□□□□□ -0.41
ABCF1-202ENST00000376545 CCDC144CPQ8IYA2 1237 aa12.49□□□□□ -0.41
ABCF1-202ENST00000376545 CCDC9Q9Y3X0 531 aaKnown RBP12.49□□□□□ -0.41
ABCF1-202ENST00000376545 ITGB4P16144 1822 aa12.49□□□□□ -0.41
ABCF1-202ENST00000376545 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
ABCF1-202ENST00000376545 FGAP02671 866 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 ADORA1P30542 326 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 CACTINQ8WUQ7 758 aaKnown RBP12.48□□□□□ -0.41
ABCF1-202ENST00000376545 ANKRD7Q92527 254 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 CCDC94Q9BW85 323 aaPredicted RBP12.48□□□□□ -0.41
ABCF1-202ENST00000376545 CLIP2Q9UDT6 1046 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 PCDHA7Q9UN72 937 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 SOS2Q07890 1332 aaPredicted RBP12.48□□□□□ -0.41
ABCF1-202ENST00000376545 CDHR2Q9BYE9 1310 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 ANTXR2P58335 489 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 CEBPZQ03701 1054 aaKnown RBP12.48□□□□□ -0.41
ABCF1-202ENST00000376545 CCDC57Q2TAC2 916 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 LINC00301Q8NCQ3 95 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 APPBP2Q92624 585 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 BCL2L12Q9HB09 334 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 KCND1Q9NSA2 647 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 MYO5AQ9Y4I1 1855 aaKnown RBP12.48□□□□□ -0.41
ABCF1-202ENST00000376545 IL2RBP14784 551 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 SCARF1Q14162 830 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 IMMTQ16891 758 aaKnown RBP12.48□□□□□ -0.41
ABCF1-202ENST00000376545 CCDC73Q6ZRK6 1079 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 BRINP3Q76B58 766 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 CHST3Q7LGC8 479 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 BPIFA3Q9BQP9 254 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 LRP5O75197 1615 aa12.48□□□□□ -0.41
ABCF1-202ENST00000376545 NEMFO60524 1076 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 YEATS4O95619 227 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 SYCP1Q15431 976 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 TTC39AQ5SRH9 613 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 LRRC8AQ8IWT6 810 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 ZBTB38Q8NAP3 1195 aaPredicted RBP12.47□□□□□ -0.41
ABCF1-202ENST00000376545 FBXO18Q8NFZ0 1043 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 ANO10Q9NW15 660 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 RIPOR2Q9Y4F9 1068 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 LRP6O75581 1613 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 TOM1L2Q6ZVM7 507 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 MRPS27Q92552 414 aaKnown RBP12.47□□□□□ -0.41
ABCF1-202ENST00000376545 TSC1Q92574 1164 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 PUS7LQ9H0K6 701 aaKnown RBP12.47□□□□□ -0.41
ABCF1-202ENST00000376545 GPHNQ9NQX3 736 aaPredicted RBP12.47□□□□□ -0.41
ABCF1-202ENST00000376545 DOCK2Q92608 1830 aa12.47□□□□□ -0.41
ABCF1-202ENST00000376545 KINO60870 393 aaKnown RBP12.46□□□□□ -0.41
ABCF1-202ENST00000376545 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
ABCF1-202ENST00000376545 BRAPQ7Z569 592 aa12.46□□□□□ -0.41
ABCF1-202ENST00000376545 FSIP1Q8NA03 581 aa12.46□□□□□ -0.41
ABCF1-202ENST00000376545 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
ABCF1-202ENST00000376545 CHAF1AQ13111 956 aaPredicted RBP12.46□□□□□ -0.41
ABCF1-202ENST00000376545 NBPF3Q9H094 633 aa12.46□□□□□ -0.41
ABCF1-202ENST00000376545 GOLGA6L19H0YKK7 550 aa12.46□□□□□ -0.42
ABCF1-202ENST00000376545 PRC1O43663 620 aa12.46□□□□□ -0.42
ABCF1-202ENST00000376545 ZAP70P43403 619 aa12.46□□□□□ -0.42
ABCF1-202ENST00000376545 DRC7Q8IY82 874 aa12.46□□□□□ -0.42
ABCF1-202ENST00000376545 TEX13AQ9BXU3 409 aaPredicted RBP12.46□□□□□ -0.42
ABCF1-202ENST00000376545 ME1P48163 572 aa12.45□□□□□ -0.42
ABCF1-202ENST00000376545 VGLL2Q8N8G2 317 aa12.45□□□□□ -0.42
ABCF1-202ENST00000376545 NCOA7Q8NI08 942 aa12.45□□□□□ -0.42
ABCF1-202ENST00000376545 KCNG4Q8TDN1 519 aa12.45□□□□□ -0.42
ABCF1-202ENST00000376545 NUP98P52948 1817 aa12.45□□□□□ -0.42
ABCF1-202ENST00000376545 SMTNL1A8MU46 457 aa12.45□□□□□ -0.42
ABCF1-202ENST00000376545 PRDM11Q9NQV5 511 aa12.45□□□□□ -0.42
ABCF1-202ENST00000376545 CLIC4Q9Y696 253 aa12.45□□□□□ -0.42
ABCF1-202ENST00000376545 GUCY1B3Q02153 619 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 NHSL1Q5SYE7 1610 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 GPAA1O43292 621 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 ADD2P35612 726 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 MCAMP43121 646 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 NDUFA8P51970 172 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 FOSBP53539 338 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 AXDND1Q5T1B0 1012 aaPredicted RBP12.44□□□□□ -0.42
ABCF1-202ENST00000376545 MYSM1Q5VVJ2 828 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 C8orf76Q96K31 380 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 KIAA1468Q9P260 1216 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 PAXBP1Q9Y5B6 917 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 CHD4Q14839 1912 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 TIAM2Q8IVF5 1701 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 KLF18A0A0U1RQI7 1052 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 CCZ1BP86790 482 aa12.44□□□□□ -0.42
ABCF1-202ENST00000376545 CCZ1P86791 482 aaPredicted RBP12.44□□□□□ -0.42
ABCF1-202ENST00000376545 IFIT5Q13325 482 aaKnown RBP12.44□□□□□ -0.42
ABCF1-202ENST00000376545 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
ABCF1-202ENST00000376545 MAP3K15Q6ZN16 1313 aa12.43□□□□□ -0.42
ABCF1-202ENST00000376545 KIF23Q02241 960 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms