RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 RIPOR2Q9Y4F9 1068 aa17.92■□□□□ 0.46
NELFE-201ENST00000375425 F8W031 263 aaPredicted RBP17.91■□□□□ 0.46
NELFE-201ENST00000375425 DLGAP5Q15398 846 aa17.91■□□□□ 0.46
NELFE-201ENST00000375425 ANKRD44Q8N8A2 993 aa17.91■□□□□ 0.46
NELFE-201ENST00000375425 UBE2Q2LH0YL09 131 aa17.9■□□□□ 0.46
NELFE-201ENST00000375425 LRRC24Q50LG9 513 aa17.9■□□□□ 0.46
NELFE-201ENST00000375425 FAM84BQ96KN1 310 aaPredicted RBP17.9■□□□□ 0.46
NELFE-201ENST00000375425 CSRNP1Q96S65 589 aa17.9■□□□□ 0.46
NELFE-201ENST00000375425 SMC4Q9NTJ3 1288 aa17.9■□□□□ 0.46
NELFE-201ENST00000375425 MROH5Q6ZUA9 1318 aa17.9■□□□□ 0.46
NELFE-201ENST00000375425 HIBADHP31937 336 aaKnown RBP17.89■□□□□ 0.46
NELFE-201ENST00000375425 NF2P35240 595 aa17.89■□□□□ 0.46
NELFE-201ENST00000375425 GYG1P46976 350 aa17.89■□□□□ 0.46
NELFE-201ENST00000375425 FKBP1AP62942 108 aaKnown RBP17.89■□□□□ 0.46
NELFE-201ENST00000375425 TTLL12Q14166 644 aaPredicted RBP17.89■□□□□ 0.46
NELFE-201ENST00000375425 APOBEC3FQ8IUX4 373 aaKnown RBP17.89■□□□□ 0.46
NELFE-201ENST00000375425 MTMR14Q8NCE2 650 aa17.89■□□□□ 0.46
NELFE-201ENST00000375425 PCDHAC2Q9Y5I4 1007 aa17.89■□□□□ 0.46
NELFE-201ENST00000375425 ZNF646O15015 1829 aaPredicted RBP17.89■□□□□ 0.45
NELFE-201ENST00000375425 CFAP100Q494V2 611 aa17.89■□□□□ 0.45
NELFE-201ENST00000375425 RASAL3Q86YV0 1011 aa17.89■□□□□ 0.45
NELFE-201ENST00000375425 TDRD7Q8NHU6 1098 aaKnown RBP17.89■□□□□ 0.45
NELFE-201ENST00000375425 ABHD8Q96I13 439 aa17.89■□□□□ 0.45
NELFE-201ENST00000375425 TRPA1O75762 1119 aa17.88■□□□□ 0.45
NELFE-201ENST00000375425 METTL24Q5JXM2 366 aa17.88■□□□□ 0.45
NELFE-201ENST00000375425 KLHDC4Q8TBB5 520 aa17.88■□□□□ 0.45
NELFE-201ENST00000375425 PRMT6Q96LA8 375 aaPredicted RBP17.88■□□□□ 0.45
NELFE-201ENST00000375425 DEFB129Q9H1M3 183 aa17.88■□□□□ 0.45
NELFE-201ENST00000375425 RNF186Q9NXI6 227 aa17.88■□□□□ 0.45
NELFE-201ENST00000375425 FAM205AQ6ZU69 1335 aa17.87■□□□□ 0.45
NELFE-201ENST00000375425 CT47B1P0C2W7 299 aaPredicted RBP17.87■□□□□ 0.45
NELFE-201ENST00000375425 PRKG1Q13976 671 aa17.87■□□□□ 0.45
NELFE-201ENST00000375425 SAGE1Q9NXZ1 904 aa17.87■□□□□ 0.45
NELFE-201ENST00000375425 NOB1Q9ULX3 412 aaKnown RBP17.87■□□□□ 0.45
NELFE-201ENST00000375425 SPDYE2BA6NHP3 402 aa17.86■□□□□ 0.45
NELFE-201ENST00000375425 MYO1BO43795 1136 aa17.86■□□□□ 0.45
NELFE-201ENST00000375425 PDE8BO95263 885 aa17.86■□□□□ 0.45
NELFE-201ENST00000375425 SPDYE6P0CI01 402 aa17.86■□□□□ 0.45
NELFE-201ENST00000375425 RBM5P52756 815 aaKnown RBP eCLIP17.86■□□□□ 0.45
NELFE-201ENST00000375425 MFSD14BQ5SR56 506 aa17.86■□□□□ 0.45
NELFE-201ENST00000375425 FBXO33Q7Z6M2 555 aa17.86■□□□□ 0.45
NELFE-201ENST00000375425 REM2Q8IYK8 340 aaPredicted RBP17.86■□□□□ 0.45
NELFE-201ENST00000375425 ARMC9Q7Z3E5 817 aa17.85■□□□□ 0.45
NELFE-201ENST00000375425 VPS37DQ86XT2 251 aa17.85■□□□□ 0.45
NELFE-201ENST00000375425 VGLL2Q8N8G2 317 aa17.85■□□□□ 0.45
NELFE-201ENST00000375425 PAPPA2Q9BXP8 1791 aa17.84■□□□□ 0.45
NELFE-201ENST00000375425 CLRN2A0PK11 232 aa17.84■□□□□ 0.45
NELFE-201ENST00000375425 PTPN12Q05209 780 aaKnown RBP17.84■□□□□ 0.45
NELFE-201ENST00000375425 TTF2Q9UNY4 1162 aaKnown RBP17.84■□□□□ 0.45
NELFE-201ENST00000375425 IQSEC3Q9UPP2 1182 aaPredicted RBP17.84■□□□□ 0.45
NELFE-201ENST00000375425 CAVIN4Q5BKX8 364 aa17.83■□□□□ 0.45
NELFE-201ENST00000375425 VEZTQ9HBM0 779 aa17.83■□□□□ 0.45
NELFE-201ENST00000375425 ANGEL1Q9UNK9 670 aaKnown RBP17.83■□□□□ 0.45
NELFE-201ENST00000375425 FZD1Q9UP38 647 aa17.83■□□□□ 0.45
NELFE-201ENST00000375425 AOX1Q06278 1338 aa17.83■□□□□ 0.44
NELFE-201ENST00000375425 A0A1B0GUL6 1792 aa17.83■□□□□ 0.44
NELFE-201ENST00000375425 FRAT2O75474 233 aaPredicted RBP17.82■□□□□ 0.44
NELFE-201ENST00000375425 RFX5P48382 616 aaPredicted RBP17.82■□□□□ 0.44
NELFE-201ENST00000375425 BCAMP50895 628 aa17.82■□□□□ 0.44
NELFE-201ENST00000375425 LDLRAD1Q5T700 205 aa17.82■□□□□ 0.44
NELFE-201ENST00000375425 MCOLN1Q9GZU1 580 aa17.82■□□□□ 0.44
NELFE-201ENST00000375425 SERPINA10Q9UK55 444 aa17.82■□□□□ 0.44
NELFE-201ENST00000375425 PPP2R3BQ9Y5P8 575 aa17.82■□□□□ 0.44
NELFE-201ENST00000375425 UBTFL1P0CB47 393 aaPredicted RBP17.81■□□□□ 0.44
NELFE-201ENST00000375425 RARSP54136 660 aaKnown RBP17.81■□□□□ 0.44
NELFE-201ENST00000375425 MKRN3Q13064 507 aaKnown RBP17.81■□□□□ 0.44
NELFE-201ENST00000375425 CHAF1AQ13111 956 aaPredicted RBP17.81■□□□□ 0.44
NELFE-201ENST00000375425 API5Q9BZZ5 524 aaKnown RBP17.81■□□□□ 0.44
NELFE-201ENST00000375425 CASP8AP2Q9UKL3 1982 aa17.81■□□□□ 0.44
NELFE-201ENST00000375425 CCDC85CA6NKD9 419 aa17.81■□□□□ 0.44
NELFE-201ENST00000375425 EYA2O00167 538 aa17.81■□□□□ 0.44
NELFE-201ENST00000375425 FGFR2P21802 821 aa17.81■□□□□ 0.44
NELFE-201ENST00000375425 DGKZQ13574 1117 aa17.81■□□□□ 0.44
NELFE-201ENST00000375425 PUM3Q15397 648 aaKnown RBP17.81■□□□□ 0.44
NELFE-201ENST00000375425 GRIK5Q16478 980 aa17.81■□□□□ 0.44
NELFE-201ENST00000375425 SUPT20HL1Q3ZLR7 823 aa17.81■□□□□ 0.44
NELFE-201ENST00000375425 PPP1R12BO60237 982 aaPredicted RBP17.8■□□□□ 0.44
NELFE-201ENST00000375425 COL1A1P02452 1464 aaPredicted RBP17.8■□□□□ 0.44
NELFE-201ENST00000375425 IFIT1P09914 478 aaKnown RBP17.8■□□□□ 0.44
NELFE-201ENST00000375425 TM4SF4P48230 202 aa17.8■□□□□ 0.44
NELFE-201ENST00000375425 RASA3Q14644 834 aa17.8■□□□□ 0.44
NELFE-201ENST00000375425 MAP3K11Q16584 847 aa17.8■□□□□ 0.44
NELFE-201ENST00000375425 NBPF12Q5TAG4 269 aaPredicted RBP17.8■□□□□ 0.44
NELFE-201ENST00000375425 DZIP1LQ8IYY4 767 aaKnown RBP17.8■□□□□ 0.44
NELFE-201ENST00000375425 TBC1D22AQ8WUA7 517 aa17.8■□□□□ 0.44
NELFE-201ENST00000375425 TDRD3Q9H7E2 651 aaKnown RBP17.8■□□□□ 0.44
NELFE-201ENST00000375425 ZNF70Q9UC06 446 aaPredicted RBP17.8■□□□□ 0.44
NELFE-201ENST00000375425 CRKP46108 304 aa17.79■□□□□ 0.44
NELFE-201ENST00000375425 SPDYE2Q495Y8 402 aa17.79■□□□□ 0.44
NELFE-201ENST00000375425 ATG9AQ7Z3C6 839 aa17.79■□□□□ 0.44
NELFE-201ENST00000375425 SLC10A4Q96EP9 437 aa17.79■□□□□ 0.44
NELFE-201ENST00000375425 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.79■□□□□ 0.44
NELFE-201ENST00000375425 KIF16BQ96L93 1317 aa17.77■□□□□ 0.44
NELFE-201ENST00000375425 TBC1D8O95759 1140 aa17.77■□□□□ 0.44
NELFE-201ENST00000375425 TNFAIP1Q13829 316 aa17.77■□□□□ 0.44
NELFE-201ENST00000375425 SPRYD7Q5W111 196 aa17.77■□□□□ 0.44
NELFE-201ENST00000375425 LPIN2Q92539 896 aa17.77■□□□□ 0.44
NELFE-201ENST00000375425 ARHGAP45Q92619 1136 aa17.77■□□□□ 0.44
NELFE-201ENST00000375425 SIL1Q9H173 461 aa17.77■□□□□ 0.44
NELFE-201ENST00000375425 HDAC5Q9UQL6 1122 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms