RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 HSPA4P34932 840 aa14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 ZNF830Q96NB3 372 aaPredicted RBP14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 TCP11L1Q9NUJ3 509 aa14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 CTAGE15A4D2H0 777 aa14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 CTAGE8P0CG41 777 aa14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 CETN1Q12798 172 aa14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 CATIPQ7Z7H3 387 aa14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 CTAGE6Q86UF2 777 aa14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 CTAGE4Q8IX94 777 aa14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 DNAI2Q9GZS0 605 aa14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 BICC1Q9H694 974 aaKnown RBP14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 KIAA1210Q9ULL0 1709 aa14.02□□□□□ -0.17
NPLOC4-202ENST00000374747 UBASH3AP57075 661 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 CCDC186Q7Z3E2 898 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 CRACR2BQ8N4Y2 399 aaPredicted RBP14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 BBXQ8WY36 941 aaPredicted RBP14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 NOP2P46087 812 aaKnown RBP14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 PRPF4BQ13523 1007 aaKnown RBP14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 C6orf163Q5TEZ5 329 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 CALML4Q96GE6 196 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 N4BP3O15049 544 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 ANO6Q4KMQ2 910 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 PLEKHM2Q8IWE5 1019 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 SRRTQ9BXP5 876 aaKnown RBP14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 DNAI1Q9UI46 699 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 CTNNA2P26232 953 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 MCMDC2Q4G0Z9 681 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 FRMPD1Q5SYB0 1578 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 ISM2Q6H9L7 571 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 ANKARQ7Z5J8 1434 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 NCOA7Q8NI08 942 aa14.01□□□□□ -0.17
NPLOC4-202ENST00000374747 GTF2A1P52655 376 aaPredicted RBP14□□□□□ -0.17
NPLOC4-202ENST00000374747 GSTO1P78417 241 aa14□□□□□ -0.17
NPLOC4-202ENST00000374747 IFI16Q16666 785 aaKnown RBP14□□□□□ -0.17
NPLOC4-202ENST00000374747 ARHGEF25Q86VW2 580 aa14□□□□□ -0.17
NPLOC4-202ENST00000374747 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14□□□□□ -0.172e-7■■□□□ 13.1
NPLOC4-202ENST00000374747 PARP10Q53GL7 1025 aa14□□□□□ -0.17
NPLOC4-202ENST00000374747 ZGPATQ8N5A5 531 aaKnown RBP14□□□□□ -0.17
NPLOC4-202ENST00000374747 IL17REQ8NFR9 667 aa14□□□□□ -0.17
NPLOC4-202ENST00000374747 SLU7O95391 586 aaKnown RBP14□□□□□ -0.17
NPLOC4-202ENST00000374747 PPM1EQ8WY54 764 aa14□□□□□ -0.17
NPLOC4-202ENST00000374747 KAT6BQ8WYB5 2073 aa14□□□□□ -0.17
NPLOC4-202ENST00000374747 IGSF1Q8N6C5 1336 aa14□□□□□ -0.17
NPLOC4-202ENST00000374747 PHKG2P15735 406 aa14□□□□□ -0.17
NPLOC4-202ENST00000374747 ZFP91Q96JP5 570 aaPredicted RBP14□□□□□ -0.17
NPLOC4-202ENST00000374747 CTAGE1Q96RT6 745 aa14□□□□□ -0.17
NPLOC4-202ENST00000374747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14□□□□□ -0.174e-7■■□□□ 13
NPLOC4-202ENST00000374747 RSPH14Q9UHP6 348 aa14□□□□□ -0.17
NPLOC4-202ENST00000374747 AKR1B10O60218 316 aa13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 SYKP43405 635 aa13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 ZNF496Q96IT1 587 aaPredicted RBP13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 IDEP14735 1019 aa13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 HS1BP3Q53T59 392 aa13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 GTPBP4Q9BZE4 634 aaKnown RBP13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 UBA7P41226 1012 aa13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 TCERG1LQ5VWI1 586 aa13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 PPP4R3AQ6IN85 833 aa13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 PAG1Q9NWQ8 432 aa13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 MFSD6Q6ZSS7 791 aa13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 CRNKL1Q9BZJ0 848 aaKnown RBP13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 RMND1Q9NWS8 449 aa13.99□□□□□ -0.17
NPLOC4-202ENST00000374747 CD2BP2O95400 341 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 CYLC1P35663 651 aaPredicted RBP13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 METAP2P50579 478 aaKnown RBP eCLIP13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 PDE4BQ07343 736 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 MCM6Q14566 821 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 TMEM67Q5HYA8 995 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 CNPY2Q9Y2B0 182 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 MYO1BO43795 1136 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 TFCP2Q12800 502 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 USP48Q86UV5 1035 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 CCDC155Q8N6L0 562 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 SPATA24Q86W54 205 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 SNX21Q969T3 373 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 TRIM47Q96LD4 638 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 RBM8AQ9Y5S9 174 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 KCNG4Q8TDN1 519 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 FBF1Q8TES7 1133 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 ZNF622Q969S3 477 aaKnown RBP eCLIP13.98□□□□□ -0.172e-10■□□□□ 10.8
NPLOC4-202ENST00000374747 NSRP1Q9H0G5 558 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 KIAA0753Q2KHM9 967 aa13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
NPLOC4-202ENST00000374747 OPA1O60313 960 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 SIRT2Q8IXJ6 389 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 CCDC94Q9BW85 323 aaPredicted RBP13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 HOMER2Q9NSB8 354 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 ALKQ9UM73 1620 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 KIF5BP33176 963 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 PRIM1P49642 420 aaKnown RBP13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 SPAG1Q07617 926 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 MICU3Q86XE3 530 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 CUL5Q93034 780 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 GLI2P10070 1586 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 CDK12Q9NYV4 1490 aaPredicted RBP13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 HAND2P61296 217 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 DDX12PQ92771 950 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 LRRC27Q9C0I9 530 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 ATP2C2O75185 946 aa13.97□□□□□ -0.17
NPLOC4-202ENST00000374747 CCDC96Q2M329 555 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms