RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 LSG1Q9H089 658 aaKnown RBP9.06□□□□□ -0.96
HERC4-202ENST00000373700 STX8Q9UNK0 236 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 NAA16Q6N069 864 aaPredicted RBP9.06□□□□□ -0.96
HERC4-202ENST00000373700 MFSD6Q6ZSS7 791 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 NLRP10Q86W26 655 aa9.06□□□□□ -0.96
HERC4-202ENST00000373700 QTRT2Q9H974 415 aaKnown RBP9.06□□□□□ -0.96
HERC4-202ENST00000373700 SLC3A2P08195 630 aaKnown RBP9.05□□□□□ -0.96
HERC4-202ENST00000373700 PICALMQ13492 652 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 DHX8Q14562 1220 aaKnown RBP9.05□□□□□ -0.96
HERC4-202ENST00000373700 PI4K2BQ8TCG2 481 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 ANO10Q9NW15 660 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.05□□□□□ -0.96
HERC4-202ENST00000373700 NRKQ7Z2Y5 1582 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 A0A1B0GVL5 298 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 UQCRFS1P1P0C7P4 283 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 ZNF445P59923 1031 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 TTF1Q15361 905 aaPredicted RBP9.05□□□□□ -0.96
HERC4-202ENST00000373700 FAM196AQ6ZSG2 479 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 CNBD1Q8NA66 436 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 COPRSQ9NQ92 184 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 FSD2A1L4K1 749 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 ALG1Q9BT22 464 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 PRDM10Q9NQV6 1147 aa9.05□□□□□ -0.96
HERC4-202ENST00000373700 hCG_1642624A0A1W2PR95 340 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 TSPY2A6NKD2 308 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 ATP5JP18859 108 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 PTGS1P23219 599 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 SUSD4Q5VX71 490 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 CTDSPL2Q05D32 466 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 POLA2Q14181 598 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 NOLC1Q14978 699 aaKnown RBP eCLIP9.04□□□□□ -0.96
HERC4-202ENST00000373700 ZNF771Q7L3S4 317 aaPredicted RBP9.04□□□□□ -0.96
HERC4-202ENST00000373700 ANKRD20A12PQ8NF67 263 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 FAM200AQ8TCP9 573 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 CPLX3Q8WVH0 158 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 IL25Q9H293 177 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 ZNF532Q9HCE3 1301 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 PCCAP05165 728 aaPredicted RBP9.04□□□□□ -0.96
HERC4-202ENST00000373700 LIG1P18858 919 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 PUM3Q15397 648 aaKnown RBP9.04□□□□□ -0.96
HERC4-202ENST00000373700 GPR101Q96P66 508 aaPredicted RBP9.04□□□□□ -0.96
HERC4-202ENST00000373700 CDCA7Q9BWT1 371 aaPredicted RBP9.04□□□□□ -0.96
HERC4-202ENST00000373700 AOX1Q06278 1338 aa9.04□□□□□ -0.96
HERC4-202ENST00000373700 A0A087WWV3 80 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 ZBTB43O43298 467 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 APBA3O96018 575 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 TNNT1P13805 278 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 PDIA6Q15084 440 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 CCDC102BQ68D86 513 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 CNNM3Q8NE01 707 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 ZBTB9Q96C00 473 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 ZSCAN16Q9H4T2 348 aaPredicted RBP9.03□□□□□ -0.96
HERC4-202ENST00000373700 MTMR6Q9Y217 621 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 PXDNQ92626 1479 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 PDIA4P13667 645 aaKnown RBP9.03□□□□□ -0.96
HERC4-202ENST00000373700 LMOD1P29536 600 aaPredicted RBP9.03□□□□□ -0.96
HERC4-202ENST00000373700 SSRP1Q08945 709 aaKnown RBP9.03□□□□□ -0.96
HERC4-202ENST00000373700 ERFEQ4G0M1 354 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 TMC6Q7Z403 805 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 CMTR1Q8N1G2 835 aaKnown RBP9.03□□□□□ -0.96
HERC4-202ENST00000373700 AOPEPQ8N6M6 819 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 SDR42E1Q8WUS8 393 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 TSC1Q92574 1164 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 SFPQP23246 707 aaKnown RBP eCLIP9.03□□□□□ -0.96
HERC4-202ENST00000373700 ST5P78524 1137 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 IQCA1Q86XH1 822 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 MCM9Q9NXL9 1143 aa9.03□□□□□ -0.96
HERC4-202ENST00000373700 AATFQ9NY61 560 aaKnown RBP eCLIP9.03□□□□□ -0.96
HERC4-202ENST00000373700 SAP30BPQ9UHR5 308 aaKnown RBP9.03□□□□□ -0.96
HERC4-202ENST00000373700 ZFYP08048 801 aaPredicted RBP9.02□□□□□ -0.96
HERC4-202ENST00000373700 NEURL4Q96JN8 1562 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 CBX1P83916 185 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 PTPN14Q15678 1187 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 TTC6Q86TZ1 520 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 ZNF444Q8N0Y2 327 aaPredicted RBP9.02□□□□□ -0.97
HERC4-202ENST00000373700 TTLL11Q8NHH1 800 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 PHKBQ93100 1093 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 ZSWIM6Q9HCJ5 1215 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.02□□□□□ -0.97
HERC4-202ENST00000373700 ZDHHC9Q9Y397 364 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 V9GYY5 206 aaPredicted RBP9.02□□□□□ -0.97
HERC4-202ENST00000373700 ITSN1Q15811 1721 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.02□□□□□ -0.97
HERC4-202ENST00000373700 MAGEB6P1A0A0J9YX57 407 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 UFL1O94874 794 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 IPO7O95373 1038 aaKnown RBP9.02□□□□□ -0.97
HERC4-202ENST00000373700 IL6STP40189 918 aaPredicted RBP9.02□□□□□ -0.97
HERC4-202ENST00000373700 STX1AQ16623 288 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 PARP10Q53GL7 1025 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 MARCH10Q8NA82 808 aaPredicted RBP9.02□□□□□ -0.97
HERC4-202ENST00000373700 LEO1Q8WVC0 666 aaPredicted RBP9.02□□□□□ -0.97
HERC4-202ENST00000373700 LPIN2Q92539 896 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 GPHNQ9NQX3 736 aaPredicted RBP9.02□□□□□ -0.97
HERC4-202ENST00000373700 MEGF6O75095 1541 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 PALLDQ8WX93 1383 aa9.02□□□□□ -0.97
HERC4-202ENST00000373700 H7C1W4 665 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 RPS8P62241 208 aaKnown RBP9.01□□□□□ -0.97
HERC4-202ENST00000373700 CHRNDQ07001 517 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 UVSSAQ2YD98 709 aa9.01□□□□□ -0.97
HERC4-202ENST00000373700 SPECC1Q5M775 1068 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms