RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 MEIS3Q99687 375 aa13.02□□□□□ -0.33
VCL-202ENST00000372755 RBM28Q9NW13 759 aaKnown RBP13.02□□□□□ -0.33
VCL-202ENST00000372755 IDI1Q13907 227 aa13.02□□□□□ -0.33
VCL-202ENST00000372755 PPP1R7Q15435 360 aa13.02□□□□□ -0.33
VCL-202ENST00000372755 DPH6Q7L8W6 267 aa13.02□□□□□ -0.33
VCL-202ENST00000372755 FAM212AQ96EL1 285 aa13.02□□□□□ -0.33
VCL-202ENST00000372755 ANXA1P04083 346 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 PPP1R2P41236 205 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 CCDC117Q8IWD4 279 aaPredicted RBP13.01□□□□□ -0.33
VCL-202ENST00000372755 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 TPD52P55327 224 aaPredicted RBP13.01□□□□□ -0.33
VCL-202ENST00000372755 SNX21Q969T3 373 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
VCL-202ENST00000372755 NIP7Q9Y221 180 aaKnown RBP eCLIP13.01□□□□□ -0.33
VCL-202ENST00000372755 CCDC160A6NGH7 325 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 VAV2P52735 878 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 CALCOCO2Q13137 446 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 PLS1Q14651 629 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 SETDB1Q15047 1291 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 CCDC110Q8TBZ0 833 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 GAS8O95995 478 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 DNM1Q05193 864 aaKnown RBP13.01□□□□□ -0.33
VCL-202ENST00000372755 CFAP157Q5JU67 520 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 DTHD1Q6ZMT9 781 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 NAP1L3Q99457 506 aaPredicted RBP13.01□□□□□ -0.33
VCL-202ENST00000372755 SEL1L2Q5TEA6 688 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
VCL-202ENST00000372755 CEP128Q6ZU80 1094 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 ZNF830Q96NB3 372 aaPredicted RBP13.01□□□□□ -0.33
VCL-202ENST00000372755 ANKRD2Q9GZV1 360 aa13.01□□□□□ -0.33
VCL-202ENST00000372755 CHRNA2Q15822 529 aa13□□□□□ -0.33
VCL-202ENST00000372755 TCEANC2Q96MN5 208 aa13□□□□□ -0.33
VCL-202ENST00000372755 MAK16Q9BXY0 300 aaKnown RBP13□□□□□ -0.33
VCL-202ENST00000372755 GUCA1BQ9UMX6 200 aa13□□□□□ -0.33
VCL-202ENST00000372755 PTPN23Q9H3S7 1636 aa13□□□□□ -0.33
VCL-202ENST00000372755 TYRO3Q06418 890 aa13□□□□□ -0.33
VCL-202ENST00000372755 TAF12Q16514 161 aa13□□□□□ -0.33
VCL-202ENST00000372755 SAMD15Q9P1V8 674 aa13□□□□□ -0.33
VCL-202ENST00000372755 NBPF11Q86T75 865 aa13□□□□□ -0.33
VCL-202ENST00000372755 IQUBQ8NA54 791 aa13□□□□□ -0.33
VCL-202ENST00000372755 CAPZA3Q96KX2 299 aa13□□□□□ -0.33
VCL-202ENST00000372755 TRIM7Q9C029 511 aa13□□□□□ -0.33
VCL-202ENST00000372755 MCM9Q9NXL9 1143 aa13□□□□□ -0.33
VCL-202ENST00000372755 LUC7L2Q9Y383 392 aaKnown RBP13□□□□□ -0.33
VCL-202ENST00000372755 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
VCL-202ENST00000372755 CPLX4Q7Z7G2 160 aa13□□□□□ -0.33
VCL-202ENST00000372755 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
VCL-202ENST00000372755 EYA3Q99504 573 aa13□□□□□ -0.33
VCL-202ENST00000372755 RAD50Q92878 1312 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 MCM7P33993 719 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 MKRN1Q9UHC7 482 aaKnown RBP12.99□□□□□ -0.33
VCL-202ENST00000372755 MSH6P52701 1360 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 EBAG9O00559 213 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 GMNNO75496 209 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 CNGA4Q8IV77 575 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 MRPL50Q8N5N7 158 aaKnown RBP12.99□□□□□ -0.33
VCL-202ENST00000372755 CSRNP2Q9H175 543 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 STIM2Q9P246 746 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 CAPN2P17655 700 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 ATP5DP30049 168 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 ATL3Q6DD88 541 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
VCL-202ENST00000372755 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
VCL-202ENST00000372755 ZNF569Q5MCW4 686 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 TPTE2Q6XPS3 522 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 CCDC65Q8IXS2 484 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 ZC3H12CQ9C0D7 883 aaKnown RBP12.99□□□□□ -0.33
VCL-202ENST00000372755 SH2D4AQ9H788 454 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 KIFAP3Q92845 792 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 CCDC114Q96M63 670 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 PODXL2Q9NZ53 605 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 FRMD4BQ9Y2L6 1034 aa12.99□□□□□ -0.33
VCL-202ENST00000372755 KCNK9Q9NPC2 374 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 IQGAP2Q13576 1575 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 IFT81Q8WYA0 676 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 C11orf95C9JLR9 678 aaPredicted RBP12.98□□□□□ -0.33
VCL-202ENST00000372755 INF2Q27J81 1249 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 VWA3BQ502W6 1294 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 GPR161Q8N6U8 529 aaKnown RBP12.98□□□□□ -0.33
VCL-202ENST00000372755 SBNO2Q9Y2G9 1366 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 WDR44Q5JSH3 913 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 CCDC26Q8TAB7 109 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 SV2BQ7L1I2 683 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 DZIP3Q86Y13 1208 aaKnown RBP12.98□□□□□ -0.33
VCL-202ENST00000372755 MAGEB6Q8N7X4 407 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 SEC62Q99442 399 aaKnown RBP12.98□□□□□ -0.33
VCL-202ENST00000372755 ZKSCAN5Q9Y2L8 839 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 NESP48681 1621 aa12.98□□□□□ -0.33
VCL-202ENST00000372755 PTPDC1A2A3K4 754 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 SH3BP5O60239 455 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 LINS1Q8NG48 757 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 LDHBP07195 334 aaKnown RBP12.97□□□□□ -0.33
VCL-202ENST00000372755 PARP1P09874 1014 aaKnown RBP12.97□□□□□ -0.33
VCL-202ENST00000372755 EPB41P11171 864 aaKnown RBP12.97□□□□□ -0.33
VCL-202ENST00000372755 DHX32Q7L7V1 743 aaKnown RBP12.97□□□□□ -0.33
VCL-202ENST00000372755 BACH1O14867 736 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 GTF2A1P52655 376 aaPredicted RBP12.97□□□□□ -0.33
VCL-202ENST00000372755 STX17P56962 302 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms