RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 GTF2E1P29083 439 aaPredicted RBP28.08■■■□□ 2.09
SNX21-204ENST00000372542 SETDB2Q96T68 719 aa28.08■■■□□ 2.09
SNX21-204ENST00000372542 LLPHQ9BRT6 129 aaKnown RBP28.08■■■□□ 2.09
SNX21-204ENST00000372542 MYO5AQ9Y4I1 1855 aaKnown RBP28.08■■■□□ 2.09
SNX21-204ENST00000372542 MAP3K12Q12852 859 aa28.08■■■□□ 2.09
SNX21-204ENST00000372542 CSPP1Q1MSJ5 1256 aa28.08■■■□□ 2.09
SNX21-204ENST00000372542 TTLL5Q6EMB2 1281 aa28.08■■■□□ 2.09
SNX21-204ENST00000372542 A0A1B0GUL6 1792 aa28.07■■■□□ 2.08
SNX21-204ENST00000372542 PFKFB2O60825 505 aa28.07■■■□□ 2.08
SNX21-204ENST00000372542 STK3Q13188 491 aa28.07■■■□□ 2.08
SNX21-204ENST00000372542 RASGRF1Q13972 1273 aa28.07■■■□□ 2.08
SNX21-204ENST00000372542 BSDC1Q9NW68 430 aaPredicted RBP28.07■■■□□ 2.08
SNX21-204ENST00000372542 ZNF532Q9HCE3 1301 aa28.07■■■□□ 2.08
SNX21-204ENST00000372542 TCRBV5S4A2TA0A5A2 114 aa28.06■■■□□ 2.08
SNX21-204ENST00000372542 ZSCAN23Q3MJ62 389 aa28.06■■■□□ 2.08
SNX21-204ENST00000372542 BICDL1Q6ZP65 573 aa28.06■■■□□ 2.08
SNX21-204ENST00000372542 TCHHQ07283 1943 aa28.06■■■□□ 2.08
SNX21-204ENST00000372542 VPS37CA5D8V6 355 aaPredicted RBP28.05■■■□□ 2.08
SNX21-204ENST00000372542 HSPA1LP34931 641 aa28.05■■■□□ 2.08
SNX21-204ENST00000372542 USP48Q86UV5 1035 aa28.05■■■□□ 2.08
SNX21-204ENST00000372542 A0A0G2JLW4 131 aa28.04■■■□□ 2.08
SNX21-204ENST00000372542 ZNF213O14771 459 aa28.04■■■□□ 2.08
SNX21-204ENST00000372542 UBE4AQ14139 1066 aa28.04■■■□□ 2.08
SNX21-204ENST00000372542 WDR19Q8NEZ3 1342 aa28.04■■■□□ 2.08
SNX21-204ENST00000372542 C4BP0C0L5 1744 aa28.04■■■□□ 2.08
SNX21-204ENST00000372542 GAS2L3Q86XJ1 694 aa28.04■■■□□ 2.08
SNX21-204ENST00000372542 SYAP1Q96A49 352 aaPredicted RBP28.04■■■□□ 2.08
SNX21-204ENST00000372542 ZNF274Q96GC6 653 aaPredicted RBP28.04■■■□□ 2.08
SNX21-204ENST00000372542 LRRC2Q9BYS8 371 aa28.04■■■□□ 2.08
SNX21-204ENST00000372542 SRP68Q9UHB9 627 aaKnown RBP28.04■■■□□ 2.08
SNX21-204ENST00000372542 WWC3Q9ULE0 1092 aa28.04■■■□□ 2.08
SNX21-204ENST00000372542 FAM182BQ5T319 152 aa28.03■■■□□ 2.08
SNX21-204ENST00000372542 C3orf67Q6ZVT6 689 aa28.03■■■□□ 2.08
SNX21-204ENST00000372542 NBPF5PQ86XG9 351 aaPredicted RBP28.03■■■□□ 2.08
SNX21-204ENST00000372542 ZMYM6O95789 1325 aa28.03■■■□□ 2.08
SNX21-204ENST00000372542 BCAMP50895 628 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 FOXD4L6Q3SYB3 417 aaPredicted RBP28.02■■■□□ 2.08
SNX21-204ENST00000372542 FOXD4L3Q6VB84 417 aaPredicted RBP28.02■■■□□ 2.08
SNX21-204ENST00000372542 TPTE2Q6XPS3 522 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 SEPT12Q8IYM1 358 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 NCOA7Q8NI08 942 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 AIDAQ96BJ3 306 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 NLRP3Q96P20 1036 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 GNL3LQ9NVN8 582 aaKnown RBP28.02■■■□□ 2.08
SNX21-204ENST00000372542 BRPF3Q9ULD4 1205 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 SNAP23O00161 211 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 EVCP57679 992 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 SCRN1Q12765 414 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 ALX1Q15699 326 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 SMARCC2Q8TAQ2 1214 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 ARHGEF1Q92888 912 aaKnown RBP28.02■■■□□ 2.08
SNX21-204ENST00000372542 CNPY2Q9Y2B0 182 aa28.02■■■□□ 2.08
SNX21-204ENST00000372542 COL4A1P02462 1669 aa28.01■■■□□ 2.07
SNX21-204ENST00000372542 MCM5P33992 734 aa28.01■■■□□ 2.07
SNX21-204ENST00000372542 BCL11BQ9C0K0 894 aaPredicted RBP28.01■■■□□ 2.07
SNX21-204ENST00000372542 KIF3AQ9Y496 699 aa28.01■■■□□ 2.07
SNX21-204ENST00000372542 ZNF804BA4D1E1 1349 aa28.01■■■□□ 2.07
SNX21-204ENST00000372542 HAND2P61296 217 aa28■■■□□ 2.07
SNX21-204ENST00000372542 HMGN5P82970 282 aaKnown RBP28■■■□□ 2.07
SNX21-204ENST00000372542 APOBRQ0VD83 1088 aa28■■■□□ 2.07
SNX21-204ENST00000372542 RALYLQ86SE5 291 aaKnown RBP28■■■□□ 2.07
SNX21-204ENST00000372542 STRBPQ96SI9 672 aaKnown RBP28■■■□□ 2.07
SNX21-204ENST00000372542 C4AP0C0L4 1744 aa28■■■□□ 2.07
SNX21-204ENST00000372542 MB21D2Q8IYB1 491 aaPredicted RBP27.99■■■□□ 2.07
SNX21-204ENST00000372542 MAGEB6Q8N7X4 407 aa27.99■■■□□ 2.07
SNX21-204ENST00000372542 GDPD2Q9HCC8 539 aa27.99■■■□□ 2.07
SNX21-204ENST00000372542 TMEM63CQ9P1W3 806 aa27.99■■■□□ 2.07
SNX21-204ENST00000372542 MINPP1Q9UNW1 487 aa27.99■■■□□ 2.07
SNX21-204ENST00000372542 UBE2HP62256 183 aa27.98■■■□□ 2.07
SNX21-204ENST00000372542 TRAPPC3LQ5T215 181 aa27.98■■■□□ 2.07
SNX21-204ENST00000372542 SMIM5Q71RC9 77 aa27.98■■■□□ 2.07
SNX21-204ENST00000372542 CDC37L1Q7L3B6 337 aa27.98■■■□□ 2.07
SNX21-204ENST00000372542 RBM27Q9P2N5 1060 aaKnown RBP27.98■■■□□ 2.07
SNX21-204ENST00000372542 NSFL1CQ9UNZ2 370 aaKnown RBP27.98■■■□□ 2.07
SNX21-204ENST00000372542 RFC4P35249 363 aa27.97■■■□□ 2.07
SNX21-204ENST00000372542 TRDNQ13061 729 aa27.97■■■□□ 2.07
SNX21-204ENST00000372542 PATL2C9JE40 543 aaKnown RBP27.97■■■□□ 2.07
SNX21-204ENST00000372542 JAK2O60674 1132 aa27.97■■■□□ 2.07
SNX21-204ENST00000372542 APPP05067 770 aa27.97■■■□□ 2.07
SNX21-204ENST00000372542 ADRA2BP18089 450 aa27.97■■■□□ 2.07
SNX21-204ENST00000372542 GNAT2P19087 354 aa27.97■■■□□ 2.07
SNX21-204ENST00000372542 CAVIN4Q5BKX8 364 aa27.97■■■□□ 2.07
SNX21-204ENST00000372542 FAM184AQ8NB25 1140 aa27.97■■■□□ 2.07
SNX21-204ENST00000372542 PRC1O43663 620 aa27.96■■■□□ 2.07
SNX21-204ENST00000372542 PDIA3P30101 505 aaKnown RBP27.96■■■□□ 2.07
SNX21-204ENST00000372542 RPS8P62241 208 aaKnown RBP27.96■■■□□ 2.07
SNX21-204ENST00000372542 NSUN7Q8NE18 718 aaKnown RBP27.96■■■□□ 2.07
SNX21-204ENST00000372542 CELF1Q92879 486 aaKnown RBP27.96■■■□□ 2.07
SNX21-204ENST00000372542 TAF1P21675 1872 aa27.96■■■□□ 2.07
SNX21-204ENST00000372542 PNPLA7Q6ZV29 1317 aa27.95■■■□□ 2.07
SNX21-204ENST00000372542 GADD45BO75293 160 aaPredicted RBP27.95■■■□□ 2.07
SNX21-204ENST00000372542 KRT85P78386 507 aa27.95■■■□□ 2.07
SNX21-204ENST00000372542 DNM1Q05193 864 aaKnown RBP27.95■■■□□ 2.07
SNX21-204ENST00000372542 ANKRD2Q9GZV1 360 aa27.95■■■□□ 2.07
SNX21-204ENST00000372542 PHF14O94880 888 aa27.95■■■□□ 2.06
SNX21-204ENST00000372542 FIBPO43427 364 aa27.94■■■□□ 2.06
SNX21-204ENST00000372542 DTNBO60941 627 aa27.94■■■□□ 2.06
SNX21-204ENST00000372542 MBD4O95243 580 aa27.94■■■□□ 2.06
SNX21-204ENST00000372542 CHST3Q7LGC8 479 aa27.94■■■□□ 2.06
SNX21-204ENST00000372542 LRP2BPQ9P2M1 347 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms